Gene: Duzib205G1644

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib205G1644
  • Transcript Identifier Duzib205G1644.03
  • Gene Type Coding gene
  • Location NW_019168381.1 : 24956320-24965217 : positive

Gene Family Information

  • ID HOM05D001045
  • #Genes/#Species 581/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111289757
  • name XM_022881051.1
  • pid XP_022736786.1
  • id gene-LOC111289757
  • uniprot A0A6P5Y9V7

Descriptions

  • product ribonuclease J, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0060918
ISO
PLAZA Integrative Orthologyauxin transport AT5G63420
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G63420
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G63420
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G63420
GO:0006414
ISO
PLAZA Homology (enrichment)translational elongation HOM05D001045
GO:0009942
ISO
PLAZA Integrative Orthologylongitudinal axis specification AT5G63420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0008409
ISO
PLAZA Integrative Orthology5'-3' exonuclease activity AT5G63420
GO:0003746
ISO
PLAZA Homology (enrichment)translation elongation factor activity HOM05D001045
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT5G63420
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G63420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G63420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001279 Metallo-beta-lactamase
IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR042173 Ribonuclease J, domain 2
IPR044822 Myb/SANT-like DNA-binding domain 4
Mapman id Description
16.11.1.4 RNA processing.organelle machinery.ribonuclease activities.exo-/endoribonuclease (RNase J)