Gene: ATR0680G066

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0680G066
  • Transcript Identifier ATR0680G066.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00009 : 5631173-5648851 : negative

Gene Family Information

  • ID HOM05D001045
  • #Genes/#Species 581/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00009.218.v1.0
  • pacid 31568866

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0060918
ISO
PLAZA Integrative Orthologyauxin transport AT5G63420
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G63420
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT5G63420
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G63420
GO:0006414
ISO
PLAZA Homology (enrichment)translational elongation HOM05D001045
GO:0009942
ISO
PLAZA Integrative Orthologylongitudinal axis specification AT5G63420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008409
ISO
PLAZA Integrative Orthology5'-3' exonuclease activity AT5G63420
GO:0003746
ISO
PLAZA Homology (enrichment)translation elongation factor activity HOM05D001045
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT5G63420
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G63420

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G63420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR001279 Metallo-beta-lactamase
IPR042173 Ribonuclease J, domain 2
IPR044822 Myb/SANT-like DNA-binding domain 4
IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain
IPR001005 SANT/Myb domain
Mapman id Description
16.11.1.4 RNA processing.organelle machinery.ribonuclease activities.exo-/endoribonuclease (RNase J)