Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_06162 Sequoiadendron giganteum HOM05D003451 ORTHO05D003918 1.9e-51 205.7 111 100.0
TAR369G0018 Trochodendron aralioides HOM05D003451 ORTHO05D003918 1.2e-21 106.7 66 84.8
Nn7g36360 Nelumbo nucifera HOM05D003451 ORTHO05D003918 4.5e-21 104.8 66 83.3
GSVIVG01026504001 Vitis vinifera HOM05D003451 ORTHO05D003918 4.5e-21 104.8 66 83.3
Aqoxy2G00229 Aquilegia oxysepala HOM05D003451 ORTHO05D003918 1.3e-20 103.2 66 80.3
Nn2g15160 Nelumbo nucifera HOM05D003451 ORTHO05D003918 1.3e-20 103.2 66 80.3
TAR623G1024 Trochodendron aralioides HOM05D003451 ORTHO05D003918 1.7e-20 102.8 66 81.8
vmacro04126 Vaccinium macrocarpon HOM05D003451 ORTHO05D003918 2.9e-20 102.1 63 81.0
CDE09G0232 Ceratophyllum demersum HOM05D003451 ORTHO05D003918 3.8e-20 101.7 66 78.8
Lsat_1_v5_gn_6_25861 Lactuca sativa HOM05D003451 ORTHO05D003918 3.8e-20 101.7 63 76.2
PSO339G2767 Papaver somniferum HOM05D003451 ORTHO05D003918 4.9e-20 101.3 63 77.8
CSS0013826 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 6.5e-20 100.9 63 79.4
PSO384G4628 Papaver somniferum HOM05D003451 ORTHO05D003918 1.1e-19 100.1 63 77.8
HanXRQChr13g0401231 Helianthus annuus HOM05D003451 ORTHO05D003918 1.4e-19 99.8 63 74.6
Lj2A624G28 Lonicera japonica HOM05D003451 ORTHO05D003918 1.9e-19 99.4 63 79.4
Lj5C793G3 Lonicera japonica HOM05D003451 ORTHO05D003918 1.9e-19 99.4 63 79.4
EL10Ac4g10211 Beta vulgaris HOM05D003451 ORTHO05D003918 2.5e-19 99.0 66 77.3
Lsat_1_v5_gn_1_49181 Lactuca sativa HOM05D003451 ORTHO05D003918 2.5e-19 99.0 63 76.2
Actinidia11670 Actinidia chinensis HOM05D003451 ORTHO05D003918 3.2e-19 98.6 63 77.8
Hma1.2p1_0390F.1_g142550 Hydrangea macrophylla HOM05D003451 ORTHO05D003918 4.2e-19 98.2 63 79.4
DCAR_019964 Daucus carota HOM05D003451 ORTHO05D003918 5.5e-19 97.8 63 76.2
PSO541G4141 Papaver somniferum HOM05D003451 ORTHO05D003918 7.1e-19 97.4 66 77.3
PSO675G7264 Papaver somniferum HOM05D003451 ORTHO05D003918 7.1e-19 97.4 66 77.3
Actinidia06925 Actinidia chinensis HOM05D003451 ORTHO05D003918 1.2e-18 96.7 63 76.2
HPP92_003156 Vanilla planifolia HOM05D003451 ORTHO05D003918 1.2e-18 96.7 65 76.9
Sopen06g023960 Solanum pennellii HOM05D003451 ORTHO05D003918 1.6e-18 96.3 63 76.2
PGSC0003DMG400026119 Solanum tuberosum HOM05D003451 ORTHO05D003918 1.6e-18 96.3 63 76.2
Peaxi162Scf00268g01431 Petunia axillaris HOM05D003451 ORTHO05D003918 2.1e-18 95.9 63 76.2
Pp3c11_21740 Physcomitrium patens HOM05D003451 ORTHO05D003918 2.1e-18 95.9 67 76.1
Pp3c7_3000 Physcomitrium patens HOM05D003451 ORTHO05D003918 2.1e-18 95.9 67 77.6
Solyc06g065470.4 Solanum lycopersicum HOM05D003451 ORTHO05D003918 2.1e-18 95.9 63 76.2
Migut.N02344 Erythranthe guttata HOM05D003451 ORTHO05D003918 2.7e-18 95.5 63 74.6
Dinv36234 Davidia involucrata HOM05D003451 ORTHO05D003918 3.5e-18 95.1 63 74.6
Mapoly0141s0030 Marchantia polymorpha HOM05D003451 ORTHO05D003918 4.6e-18 94.7 68 79.4
Os05g0140500 Oryza sativa ssp. japonica HOM05D003451 ORTHO05D003918 4.6e-18 94.7 66 78.8
CSS0014106 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 6.0e-18 94.4 62 75.8
HanXRQChr11g0351591 Helianthus annuus HOM05D003451 ORTHO05D003918 1.3e-17 93.2 63 71.4
Oeu001483.1 Olea europaea HOM05D003451 ORTHO05D003918 1.3e-17 93.2 63 73.0
Eucgr.J00743 Eucalyptus grandis HOM05D003451 ORTHO05D003918 1.8e-17 92.8 65 76.9
CSS0003600 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 3.9e-17 91.7 76 64.5
ATR0021G055 Amborella trichopoda HOM05D003451 ORTHO05D003918 6.7e-17 90.9 64 75.0
PGR102G1026 Punica granatum HOM05D003451 ORTHO05D003918 1.5e-16 89.7 65 72.3
Ah.04g162060 Amaranthus hybridus HOM05D003451 ORTHO05D003918 1.9e-16 89.4 63 69.8
ECA233G6223 Erigeron canadensis HOM05D003451 ORTHO05D003918 2.5e-16 89.0 63 71.4
unitig_27.g25002 Utricularia gibba HOM05D003451 ORTHO05D003918 2.5e-16 89.0 63 74.6
AagrBONN_evm.TU.Sc2ySwM_344.5320 Anthoceros agrestis HOM05D003451 ORTHO05D003918 4.3e-16 88.2 68 72.1
MSTRG.17605 Avicennia marina HOM05D003451 ORTHO05D003918 7.4e-16 87.4 63 69.8
Migut.D00628 Erythranthe guttata HOM05D003451 ORTHO05D003918 7.4e-16 87.4 63 69.8
Cc01_g05030 Coffea canephora HOM05D003451 ORTHO05D003918 1.3e-15 86.7 63 68.3
CANSAT54G1907 Cannabis sativa HOM05D003451 ORTHO05D003918 4.8e-15 84.7 69 71.0
THA.LOC104817916 Tarenaya hassleriana HOM05D003451 ORTHO05D003918 8.2e-15 84.0 70 70.0
CSS0015848 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 1.1e-14 83.6 76 60.5
Manes.14G004400 Manihot esculenta HOM05D003451 ORTHO05D003918 2.4e-14 82.4 66 71.2
Manes.06G162200 Manihot esculenta HOM05D003451 ORTHO05D003918 3.1e-14 82.0 66 71.2
Zm00001eb417640 Zea mays HOM05D003451 ORTHO05D003918 3.1e-14 82.0 66 66.7
Sc09g0000810 Simmondsia chinensis HOM05D003451 ORTHO05D003918 6.9e-14 80.9 50 78.0
TWI60G0042 Tripterygium wilfordii HOM05D003451 ORTHO05D003918 6.9e-14 80.9 70 68.6
Gohir.A09G110960 Gossypium hirsutum HOM05D003451 ORTHO05D003918 9.0e-14 80.5 70 68.6
Cpa.g.sc84.26 Carica papaya HOM05D003451 ORTHO05D003918 1.2e-13 80.1 70 68.6
Gohir.D09G107600 Gossypium hirsutum HOM05D003451 ORTHO05D003918 1.2e-13 80.1 70 68.6
THA.LOC104811180 Tarenaya hassleriana HOM05D003451 ORTHO05D003918 1.2e-13 80.1 70 65.7
Atru.chr3.2648 Acer truncatum HOM05D003451 ORTHO05D003918 1.5e-13 79.7 70 68.6
THA.LOC104816872 Tarenaya hassleriana HOM05D003451 ORTHO05D003918 1.5e-13 79.7 72 66.7
Ciclev10016808m.g Citrus clementina HOM05D003451 ORTHO05D003918 2.6e-13 79.0 70 67.1
Gohir.D05G076000 Gossypium hirsutum HOM05D003451 ORTHO05D003918 2.6e-13 79.0 70 67.1
Gorai.009G077300 Gossypium raimondii HOM05D003451 ORTHO05D003918 2.6e-13 79.0 70 67.1
QL01p004066 Quercus lobata HOM05D003451 ORTHO05D003918 2.6e-13 79.0 70 67.1
TWI32G0677 Tripterygium wilfordii HOM05D003451 ORTHO05D003918 2.6e-13 79.0 70 68.6
CiPaw.14G116900 Carya illinoinensis HOM05D003451 ORTHO05D003918 3.4e-13 78.6 71 66.2
Duzib168G0102 Durio zibethinus HOM05D003451 ORTHO05D003918 3.4e-13 78.6 70 67.1
SMO144G0212 Selaginella moellendorffii HOM05D003451 ORTHO05D003918 3.4e-13 78.6 89 55.1
CiPaw.13G154800 Carya illinoinensis HOM05D003451 ORTHO05D003918 4.5e-13 78.2 71 64.8
Duzib170G0373 Durio zibethinus HOM05D003451 ORTHO05D003918 4.5e-13 78.2 70 65.7
Nitab4.5_0000531g0010 Nicotiana tabacum HOM05D003451 ORTHO05D003918 4.5e-13 78.2 56 69.6
AL1G59400 Arabidopsis lyrata HOM05D003451 ORTHO05D003918 5.9e-13 77.8 70 65.7
MSTRG.12458 Avicennia marina HOM05D003451 ORTHO05D003918 5.9e-13 77.8 50 74.0
ClCG03G013000 Citrullus lanatus HOM05D003451 ORTHO05D003918 5.9e-13 77.8 66 66.7
SalBow6G3934 Salvia bowleyana HOM05D003451 ORTHO05D003918 5.9e-13 77.8 50 74.0
TWI34G0098 Tripterygium wilfordii HOM05D003451 ORTHO05D003918 5.9e-13 77.8 70 67.1
CBR_g6624 Chara braunii HOM05D003451 ORTHO05D003918 7.6e-13 77.4 68 69.1
Gohir.A05G073100 Gossypium hirsutum HOM05D003451 ORTHO05D003918 7.6e-13 77.4 70 65.7
Zm00001eb109210 Zea mays HOM05D003451 ORTHO05D003918 7.6e-13 77.4 75 54.7
Zm00001eb207160 Zea mays HOM05D003451 ORTHO05D003918 7.6e-13 77.4 75 54.7
Aa31LG10G3250 Aethionema arabicum HOM05D003451 ORTHO05D003918 1.0e-12 77.0 70 67.1
BcaC08g43315 Brassica carinata HOM05D003451 ORTHO05D003918 1.0e-12 77.0 67 67.2
A06p02460 Brassica napus HOM05D003451 ORTHO05D003918 1.0e-12 77.0 67 67.2
C06p06630 Brassica napus HOM05D003451 ORTHO05D003918 1.0e-12 77.0 67 67.2
BolC6t35776H Brassica oleracea HOM05D003451 ORTHO05D003918 1.0e-12 77.0 67 67.2
BraA06t23452Z Brassica rapa HOM05D003451 ORTHO05D003918 1.0e-12 77.0 67 67.2
MELO3C015160.2 Cucumis melo HOM05D003451 ORTHO05D003918 1.0e-12 77.0 66 66.7
CsaV3_1G043070 Cucumis sativus L. HOM05D003451 ORTHO05D003918 1.0e-12 77.0 66 66.7
Nitab4.5_0000159g0090 Nicotiana tabacum HOM05D003451 ORTHO05D003918 1.0e-12 77.0 55 69.1
Sp1g38150 Schrenkiella parvula HOM05D003451 ORTHO05D003918 1.0e-12 77.0 67 65.7
Sed0009927 Sechium edule HOM05D003451 ORTHO05D003918 1.0e-12 77.0 66 66.7
SalBow1G0548 Salvia bowleyana HOM05D003451 ORTHO05D003918 1.3e-12 76.6 49 73.5
SalBow1G0865 Salvia bowleyana HOM05D003451 ORTHO05D003918 1.3e-12 76.6 49 73.5
SalBow1G4695 Salvia bowleyana HOM05D003451 ORTHO05D003918 1.3e-12 76.6 49 73.5
BcaB07g33596 Brassica carinata HOM05D003451 ORTHO05D003918 1.7e-12 76.3 67 65.7
BcaC01g01279 Brassica carinata HOM05D003451 ORTHO05D003918 1.7e-12 76.3 68 64.7
A08p02680 Brassica napus HOM05D003451 ORTHO05D003918 1.7e-12 76.3 68 64.7
C03p90160 Brassica napus HOM05D003451 ORTHO05D003918 1.7e-12 76.3 68 64.7
BolC3t21338H Brassica oleracea HOM05D003451 ORTHO05D003918 1.7e-12 76.3 68 64.7
BraA08t32308Z Brassica rapa HOM05D003451 ORTHO05D003918 1.7e-12 76.3 68 64.7
Thecc.09G245200 Theobroma cacao HOM05D003451 ORTHO05D003918 1.7e-12 76.3 68 67.6
Haze_23175 Corylus avellana HOM05D003451 ORTHO05D003918 2.2e-12 75.9 71 63.4
Phvul.002G034400 Phaseolus vulgaris HOM05D003451 ORTHO05D003918 2.2e-12 75.9 68 66.2
VMungo1215G1947 Vigna mungo HOM05D003451 ORTHO05D003918 2.2e-12 75.9 68 66.2
Psat2g186200 Pisum sativum HOM05D003451 ORTHO05D003918 2.9e-12 75.5 67 64.2
Cfa009811 Carpinus fangiana HOM05D003451 ORTHO05D003918 3.8e-12 75.1 71 63.4
Dinv22160 Davidia involucrata HOM05D003451 ORTHO05D003918 3.8e-12 75.1 49 73.5
Glyma.01G227300 Glycine max HOM05D003451 ORTHO05D003918 3.8e-12 75.1 68 66.2
Glyma.11G015500 Glycine max HOM05D003451 ORTHO05D003918 3.8e-12 75.1 68 66.2
Gohir.A13G218200 Gossypium hirsutum HOM05D003451 ORTHO05D003918 3.8e-12 75.1 68 64.7
Gohir.D13G221900 Gossypium hirsutum HOM05D003451 ORTHO05D003918 3.8e-12 75.1 68 64.7
Gorai.013G253000 Gossypium raimondii HOM05D003451 ORTHO05D003918 3.8e-12 75.1 68 64.7
Hund07468 Selenicereus undatus HOM05D003451 ORTHO05D003918 3.8e-12 75.1 50 68.0
Ah.06g193890 Amaranthus hybridus HOM05D003451 ORTHO05D003918 5.0e-12 74.7 52 71.2
CSS0021964 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 5.0e-12 74.7 52 67.3
COL.COLO4_37539 Corchorus olitorius HOM05D003451 ORTHO05D003918 5.0e-12 74.7 70 64.3
Lj7A514T32 Lonicera japonica HOM05D003451 ORTHO05D003918 5.0e-12 74.7 50 70.0
Hund07469 Selenicereus undatus HOM05D003451 ORTHO05D003918 5.0e-12 74.7 83 49.4
BcaB04g17193 Brassica carinata HOM05D003451 ORTHO05D003918 6.5e-12 74.3 68 63.2
CSS0020415 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 6.5e-12 74.3 49 69.4
Carub.0001s4036 Capsella rubella HOM05D003451 ORTHO05D003918 6.5e-12 74.3 67 65.7
Nitab4.5_0003158g0010 Nicotiana tabacum HOM05D003451 ORTHO05D003918 6.5e-12 74.3 50 72.0
Prupe.4G255000 Prunus persica HOM05D003451 ORTHO05D003918 6.5e-12 74.3 68 63.2
unitig_699.g19138 Utricularia gibba HOM05D003451 ORTHO05D003918 6.5e-12 74.3 49 73.5
AT1G51510 Arabidopsis thaliana HOM05D003451 ORTHO05D003918 8.5e-12 73.9 71 63.4
Rhsim01G0192600 Rhododendron simsii HOM05D003451 ORTHO05D003918 8.5e-12 73.9 57 64.9
Lalb_Chr09g0320421 Lupinus albus HOM05D003451 ORTHO05D003918 1.1e-11 73.6 69 66.7
Medtr5g008890 Medicago truncatula HOM05D003451 ORTHO05D003918 1.1e-11 73.6 66 65.2
BcaC08g43919 Brassica carinata HOM05D003451 ORTHO05D003918 1.4e-11 73.2 67 62.7
C06p13130 Brassica napus HOM05D003451 ORTHO05D003918 1.4e-11 73.2 67 62.7
BolC6t36469H Brassica oleracea HOM05D003451 ORTHO05D003918 1.4e-11 73.2 67 62.7
CSS0010909 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 1.4e-11 73.2 49 71.4
Dinv39631 Davidia involucrata HOM05D003451 ORTHO05D003918 1.4e-11 73.2 63 63.5
HanXRQChr01g0029351 Helianthus annuus HOM05D003451 ORTHO05D003918 1.4e-11 73.2 57 63.2
Zm00001eb267400 Zea mays HOM05D001283 ORTHO05D001109 1.9e-11 72.8 69 58.0
BcaB02g11254 Brassica carinata HOM05D003451 ORTHO05D003918 2.5e-11 72.4 67 62.7
AUR62039863 Chenopodium quinoa HOM05D003451 ORTHO05D003918 2.5e-11 72.4 51 62.7
arahy.Tifrunner.gnm1.ann1.KKL1UE Arachis hypogaea HOM05D003451 ORTHO05D003918 3.2e-11 72.0 68 64.7
arahy.Tifrunner.gnm1.ann1.ZE8HJS Arachis hypogaea HOM05D003451 ORTHO05D003918 3.2e-11 72.0 68 64.7
A05p19520 Brassica napus HOM05D003451 ORTHO05D003918 3.2e-11 72.0 87 52.9
Lalb_Chr16g0376831 Lupinus albus HOM05D003451 ORTHO05D003918 4.2e-11 71.6 69 63.8
CSS0000811 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 5.5e-11 71.2 48 70.8
Ca_24487_v3 Cicer arietinum L. HOM05D003451 ORTHO05D003918 5.5e-11 71.2 67 64.2
BraA05t20856Z Brassica rapa HOM05D003451 ORTHO05D003918 7.2e-11 70.9 87 51.7
MD12G1080200 Malus domestica HOM05D003451 ORTHO05D003918 7.2e-11 70.9 85 52.9
Potri.006G048300 Populus trichocarpa HOM05D003451 ORTHO05D003918 7.2e-11 70.9 62 62.9
Potri.009G051000 Populus trichocarpa HOM05D003451 ORTHO05D003918 7.2e-11 70.9 68 60.3
Zm00001eb062000 Zea mays HOM05D003451 ORTHO05D003918 7.2e-11 70.9 83 49.4
Gorai.006G125200 Gossypium raimondii HOM05D003451 ORTHO05D003918 9.4e-11 70.5 50 68.0
LjContig00222g0014229 Lotus japonicus HOM05D003451 ORTHO05D003918 9.4e-11 70.5 68 63.2
RcHm_v2.0_Chr5g0053031 Rosa chinensis HOM05D003451 ORTHO05D003918 9.4e-11 70.5 68 57.4
SGA_v2.0_scaffold3G01477 Striga asiatica HOM05D003451 ORTHO05D003918 9.4e-11 70.5 50 66.0
CARHR041670 Cardamine hirsuta HOM05D003451 ORTHO05D003918 1.2e-10 70.1 70 64.3
Os03g0809900 Oryza sativa ssp. japonica HOM05D003451 ORTHO05D003918 1.2e-10 70.1 83 47.0
TPR.G37988 Trifolium pratense HOM05D003451 ORTHO05D003918 1.6e-10 69.7 67 64.2
Sopen11g008970 Solanum pennellii HOM05D000006 ORTHO05D000001 2.7e-10 68.9 51 64.7
MD03G1171900 Malus domestica HOM05D003451 ORTHO05D003918 4.6e-10 68.2 67 59.7
MD11G1189700 Malus domestica HOM05D003451 ORTHO05D003918 4.6e-10 68.2 67 59.7
Potri.001G255600 Populus trichocarpa HOM05D003451 ORTHO05D003918 4.6e-10 68.2 68 60.3
CSS0010395 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 6.1e-10 67.8 47 74.5
Thhalv10011787m.g Eutrema salsugineum HOM05D003451 ORTHO05D003918 7.9e-10 67.4 50 64.0
FvH4_3g28440 Fragaria vesca HOM05D003451 ORTHO05D003918 1.0e-09 67.0 65 56.9
FAN11G2798 Fragaria x ananassa HOM05D003451 ORTHO05D003918 1.0e-09 67.0 65 56.9
FAN16G1931 Fragaria x ananassa HOM05D003451 ORTHO05D003918 1.0e-09 67.0 65 56.9
FAN25G3146 Fragaria x ananassa HOM05D003451 ORTHO05D003918 1.0e-09 67.0 65 56.9
Sabra06G0033600 Salix brachista HOM05D003451 ORTHO05D003918 1.0e-09 67.0 55 61.8
Sabra16G0156600 Salix brachista HOM05D003451 ORTHO05D003918 1.8e-09 66.2 52 63.5
FAN21G2060 Fragaria x ananassa HOM05D003451 ORTHO05D003918 5.1e-09 64.7 59 54.2
Pp3c20_17650 Physcomitrium patens HOM05D003451 ORTHO05D003918 6.7e-09 64.3 45 68.9
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 8.8e-09 63.9 38 76.3
QL07p002699 Quercus lobata HOM05D003451 ORTHO05D003918 2.5e-08 62.4 62 54.8
Cre12.g526750 Chlamydomonas reinhardtii HOM05D003451 ORTHO05D003918 1.3e-07 60.1 65 49.2
Prupe.7G055300 Prunus persica HOM05D003451 ORTHO05D003918 1.3e-07 60.1 66 57.6
Nitab4.5_0003160g0010 Nicotiana tabacum HOM05D003451 ORTHO05D003918 8.2e-07 57.4 40 65.0
SGA_v2.0_scaffold42G16078 Striga asiatica HOM05D003451 ORTHO05D003918 1.1e-06 57.0 38 68.4
CSS0031271 Camellia sinensis var. sinensis HOM05D003451 ORTHO05D003918 1.8e-06 56.2 39 66.7
MCO09G346 Micromonas commoda HOM05D003451 ORTHO05D003918 2.4e-06 55.8 44 59.1
COL.COLO4_05419 Corchorus olitorius HOM05D003451 ORTHO05D003918 5.3e-06 54.7 41 61.0


User provided reference genes

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