Gene: COL.COLO4_05419

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_05419
  • Transcript Identifier COL.rna4240
  • Gene Type Coding gene
  • Location AWUE01012343.1 : 8766-10401 : negative

Gene Family Information

  • ID HOM05D003451
  • #Genes/#Species 198/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna4240
  • GenBank OMP09495.1
  • id gene5391
  • gene_name COLO4_05419
  • uniprot A0A1R3KQY5

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR008111 RNA-binding motif protein 8
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR033744 RBM8, RNA recognition motif
Mapman id Description
17.3.1.1.3 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component Y14