Gene: TPR.G37988

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G37988
  • Transcript Identifier TPR.T39270
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG2 : 31477271-31480331 : negative

Gene Family Information

  • ID HOM05D003451
  • #Genes/#Species 198/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA39270.v2
  • id Tp57577_TGAC_v2_gene37988.v2
  • pacid 35973312

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing
GO:0010628
ISO
PLAZA Integrative Orthologypositive regulation of gene expression AT1G51510

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
IEA
InterPromRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G51510

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005737
IEA
InterProcytoplasm
GO:0035145
ISO
PLAZA Integrative Orthologyexon-exon junction complex AT1G51510
GO:0016604
ISO
PLAZA Integrative Orthologynuclear body AT1G51510
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G51510
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G51510

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR033744 RBM8, RNA recognition motif
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR008111 RNA-binding motif protein 8
IPR035979 RNA-binding domain superfamily
Mapman id Description
17.3.1.1.3 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component Y14