Gene: Os05g0140500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0140500
  • Transcript Identifier Os05t0140500-01
  • Gene Type Coding gene
  • Location chr05 : 2331147-2333901 : positive

Gene Family Information

  • ID HOM05D003451
  • #Genes/#Species 198/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0140500-01
  • MSU-ID LOC_Os05g04850.1
  • MSU-ID LOC_Os05g04850.2
  • symbol OsY14a
  • symbol Tsunagi
  • symbol Y14a
  • symbol RBM8
  • uniprot B7FAL5

Descriptions

  • Description RNA binding motif protein 8 family protein.
  • Description Core subunit of exon junction complex (EJC), Multiple organ development and reproduction
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
IBA
IEA
GOA DatabaseRNA splicing
GO:0006396
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0010628
IEA
GOA Databasepositive regulation of gene expression
GO:0000184
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0006417
IEA
GOA Databaseregulation of translation
GO:0006397
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G51510
GO:0003729
IBA
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0016604
IEA
GOA Databasenuclear body
GO:0005730
IEA
GOA Databasenucleolus
GO:0035145
IBA
IEA
GOA Databaseexon-exon junction complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR008111 RNA-binding motif protein 8
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 RBM8, RNA recognition motif
Mapman id Description
17.3.1.1.3 Protein biosynthesis.mRNA quality control.Exon Junction complex (EJC).core components.component Y14