Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1839.3 912 100.0
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1647.1 913 89.5
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1623.6 912 88.3
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1618.2 915 87.0
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1613.2 911 86.6
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1602.4 912 85.6
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1596.3 915 85.0
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1595.1 912 85.7
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1594.7 1137 74.1
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1592.4 912 85.5
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1589.3 912 85.3
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1588.2 912 84.4
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1584.7 936 83.2
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1581.2 915 84.7
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1578.5 913 84.4
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1577.8 913 84.8
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1569.7 914 85.2
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1567.4 917 84.5
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1567.0 929 83.0
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1564.7 919 83.7
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1561.2 913 83.9
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1560.4 912 83.2
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1560.4 913 82.6
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1558.9 912 84.1
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1558.9 912 83.7
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1557.0 912 83.6
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1557.0 911 83.0
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1556.6 913 84.1
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1555.4 911 82.7
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1555.4 912 83.9
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1555.0 912 83.2
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1554.3 913 82.7
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1553.5 917 83.6
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1553.5 913 83.9
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1550.8 911 82.5
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1549.6 917 83.2
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1548.9 916 83.1
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1548.1 915 83.1
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1547.7 913 83.1
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1547.7 912 83.0
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1546.6 911 82.3
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1546.6 909 82.5
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1545.8 921 83.8
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1545.8 912 82.9
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1545.4 915 82.8
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1545.0 911 82.1
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1544.6 913 82.9
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1543.9 914 82.1
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1543.5 912 82.7
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1541.9 913 82.1
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1541.9 912 83.0
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1541.2 922 82.3
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1540.8 912 82.8
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1540.4 912 82.3
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1540.0 913 82.0
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1537.7 912 81.7
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1536.9 912 83.0
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1536.9 912 81.8
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1535.0 913 82.5
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1533.1 912 81.8
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1526.9 935 80.2
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1526.5 916 81.3
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1524.2 910 82.0
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1521.9 914 80.9
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1520.0 912 80.7
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1518.1 913 81.6
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1517.3 914 80.5
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1513.0 913 82.3
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1512.3 920 81.8
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1511.5 912 79.5
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1508.4 883 83.4
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1499.2 917 80.6
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1498.8 917 80.6
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1496.9 913 81.1
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1496.9 919 81.4
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1493.8 916 80.5
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1493.0 911 80.6
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1487.6 829 87.1
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1473.8 914 79.5
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1469.5 911 79.8
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1459.9 844 84.7
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1456.4 913 79.1
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1456.4 912 78.7
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1454.1 863 82.9
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1450.6 915 77.9
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1447.2 915 77.9
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1441.4 941 76.3
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1439.9 927 77.5
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1436.8 920 78.0
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1434.9 937 76.8
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1434.5 935 77.1
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1434.5 935 77.1
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1430.2 916 77.0
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1428.7 920 77.4
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1421.8 912 76.3
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1420.6 926 77.1
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1419.4 932 76.8
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1417.1 912 74.8
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1415.2 933 76.3
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1406.3 920 75.8
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1401.7 914 75.4
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1390.6 911 76.3
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1386.7 917 75.2
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1373.6 913 75.6
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1372.5 910 72.6
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1371.7 910 73.3
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1358.6 910 72.5
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1326.6 859 75.0
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1326.2 786 83.2
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1313.9 738 85.2
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1308.9 914 69.4
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1297.0 726 87.2
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1263.8 914 67.8
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1223.4 931 67.2
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1222.2 687 87.8
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1191.8 739 76.3
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 0.0e+00 1136.7 947 61.1
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 0.0e+00 1117.4 910 63.0
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 0.0e+00 1114.4 940 58.8
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 0.0e+00 1111.3 924 59.7
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 0.0e+00 1084.3 678 78.8
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 2.9e-291 1005.4 619 78.2
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 4.0e-285 984.9 782 62.0
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 3.3e-271 938.7 621 74.6
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 6.5e-267 924.5 549 80.3
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.2e-258 895.6 561 79.0
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 3.0e-248 862.4 522 81.6
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 5.1e-240 835.1 598 72.2
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.7e-220 769.6 500 76.0
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 5.9e-212 741.9 388 90.2
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.5e-188 662.9 386 83.4
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.4e-183 646.4 354 85.9
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 1.7e-179 634.0 1026 38.0
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 3.0e-147 526.9 413 62.2
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 5.7e-146 522.7 410 62.9
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 7.4e-138 495.7 814 37.7
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 1.5e-122 444.9 480 53.1
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 3.1e-120 437.2 253 82.2
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 3.2e-117 427.2 223 90.6
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 2.5e-109 401.0 1052 27.9
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 1.4e-107 395.2 869 32.1
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 1.5e-101 375.2 279 67.0
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 3.4e-98 364.0 249 71.9
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 1.2e-90 339.0 253 65.6
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 1.2e-90 339.0 253 65.6
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 2.2e-89 334.7 365 45.5
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 4.0e-83 313.9 296 58.4
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 8.6e-62 243.0 148 76.4
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 4.3e-53 214.2 174 54.6
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 4.2e-48 197.6 159 59.7
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 4.2e-48 197.6 159 59.7
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.7e-47 194.9 241 50.2
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 5.6e-45 187.2 103 87.4
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 9.6e-45 186.4 139 63.3
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 4.8e-44 184.1 118 72.9
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 3.4e-42 177.9 148 58.1
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 7.9e-39 166.8 99 78.8
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 8.7e-38 163.3 224 49.6
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 9.6e-37 159.8 111 70.3
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 3.7e-36 157.9 134 50.7
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 9.0e-35 153.3 76 92.1
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.6e-34 151.8 76 90.8
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 3.4e-34 151.4 75 93.3
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 1.3e-33 149.4 121 63.6
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.7e-33 149.1 76 89.5
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 4.9e-33 147.5 105 71.4
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.5e-32 145.2 78 85.9
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 3.2e-32 144.8 74 90.5
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 7.1e-32 143.7 88 79.5
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 1.9e-29 135.6 142 52.8
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 2.8e-28 131.7 78 82.1
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 4.1e-27 127.9 65 92.3
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 7.6e-26 123.6 111 54.1
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 2.7e-23 115.2 126 50.0
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 1.1e-21 109.8 143 48.3
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 1.0e-17 96.7 263 27.4
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 1.6e-15 89.4 132 47.0
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 1.6e-15 89.4 82 56.1
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 3.3e-13 81.6 56 67.9
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 2.0e-10 72.4 46 65.2
HanXRQChr15g0465621 Helianthus annuus HOM05D003791 ORTHO05D019539 7.7e-10 70.5 79 46.8
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 1.4e-08 66.2 43 67.4
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 1.2e-07 63.2 48 58.3


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