Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 6.2e-149 530.8 272 100.0
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 9.9e-38 161.4 107 79.4
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 9.9e-38 161.4 107 79.4
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 9.9e-38 161.4 107 79.4
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 3.8e-37 159.5 107 79.4
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 1.0e-34 151.4 107 74.8
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 1.3e-34 151.0 107 72.9
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 2.3e-34 150.2 107 73.8
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 2.3e-34 150.2 107 73.8
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 2.3e-34 150.2 107 73.8
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 3.0e-34 149.8 107 73.8
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 3.0e-34 149.8 107 73.8
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 5.1e-34 149.1 107 72.9
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 6.6e-34 148.7 114 68.4
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 6.6e-34 148.7 129 63.6
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 6.6e-34 148.7 107 72.9
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 1.1e-33 147.9 107 72.0
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 1.5e-33 147.5 107 72.9
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 1.5e-33 147.5 107 72.9
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 1.5e-33 147.5 107 72.9
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 1.5e-33 147.5 107 72.9
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 1.5e-33 147.5 107 72.0
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 1.9e-33 147.1 107 72.9
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 1.9e-33 147.1 107 72.9
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 1.9e-33 147.1 107 72.0
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 1.9e-33 147.1 107 72.0
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 2.5e-33 146.7 129 62.0
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 3.3e-33 146.4 107 72.0
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.3e-33 146.4 135 63.0
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 3.3e-33 146.4 106 72.6
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 3.3e-33 146.4 106 72.6
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 4.3e-33 146.0 107 72.9
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 71.0
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 72.0
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 72.0
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 72.0
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 71.0
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 72.0
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 72.0
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 5.6e-33 145.6 107 72.0
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 7.3e-33 145.2 107 72.0
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 7.3e-33 145.2 107 72.0
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 7.3e-33 145.2 107 72.0
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 7.3e-33 145.2 107 72.0
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.2e-32 144.4 107 71.0
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 1.2e-32 144.4 107 71.0
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 2.1e-32 143.7 107 72.0
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 2.1e-32 143.7 107 70.1
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 2.8e-32 143.3 107 70.1
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 2.8e-32 143.3 106 69.8
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 2.8e-32 143.3 107 71.0
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 2.8e-32 143.3 106 70.8
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 2.8e-32 143.3 107 70.1
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.8e-32 143.3 107 70.1
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 3.6e-32 142.9 106 71.7
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 3.6e-32 142.9 107 71.0
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 4.7e-32 142.5 107 69.2
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 4.7e-32 142.5 107 70.1
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 4.7e-32 142.5 107 70.1
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 4.7e-32 142.5 107 69.2
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 6.2e-32 142.1 107 70.1
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 6.2e-32 142.1 107 70.1
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 6.2e-32 142.1 107 69.2
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 6.2e-32 142.1 107 69.2
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 8.1e-32 141.7 107 70.1
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 8.1e-32 141.7 107 70.1
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 8.1e-32 141.7 107 69.2
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 8.1e-32 141.7 107 69.2
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.1e-31 141.4 107 69.2
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 1.1e-31 141.4 107 68.2
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 1.1e-31 141.4 107 67.3
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 1.1e-31 141.4 107 68.2
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 1.4e-31 141.0 107 67.3
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.4e-31 141.0 107 67.3
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 1.4e-31 141.0 107 67.3
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 1.4e-31 141.0 107 67.3
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 1.4e-31 141.0 107 68.2
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 1.4e-31 141.0 119 62.2
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 1.8e-31 140.6 106 69.8
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 1.8e-31 140.6 114 65.8
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 1.8e-31 140.6 119 63.9
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 2.4e-31 140.2 114 65.8
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.4e-31 140.2 107 71.0
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 2.4e-31 140.2 107 70.1
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 2.4e-31 140.2 107 69.2
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 3.1e-31 139.8 107 67.3
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 3.1e-31 139.8 107 70.1
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 4.0e-31 139.4 107 68.2
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 4.0e-31 139.4 107 68.2
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 4.0e-31 139.4 107 68.2
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 4.0e-31 139.4 107 68.2
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 5.2e-31 139.0 119 63.0
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 5.2e-31 139.0 107 70.1
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 5.2e-31 139.0 107 70.1
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 5.2e-31 139.0 107 70.1
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 8.9e-31 138.3 106 67.0
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 1.2e-30 137.9 106 67.0
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.2e-30 137.9 107 70.1
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 1.5e-30 137.5 107 65.4
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 2.0e-30 137.1 119 62.2
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 4.4e-30 136.0 107 66.4
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 1.7e-29 134.0 115 62.6
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 3.8e-29 132.9 103 68.9
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 1.1e-28 131.3 121 59.5
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 1.3e-24 117.9 126 54.0
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.4e-23 114.4 93 63.4
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 1.4e-23 114.4 93 63.4
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 1.8e-23 114.0 86 70.9
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 1.3e-21 107.8 107 58.9
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 1.3e-21 107.8 81 70.4
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.2e-21 107.1 86 66.3
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 8.4e-21 105.1 75 70.7
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 1.1e-20 104.8 88 62.5
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 7.1e-20 102.1 81 66.7
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 4.6e-19 99.4 152 44.7
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 1.3e-18 97.8 112 52.7
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 5.3e-15 85.9 107 43.0
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 1.4e-12 77.8 92 48.9
RcHm_v2.0_Chr4g0403131 Rosa chinensis HOM05D003776 ORTHO05D004459 1.5e-09 67.8 107 46.7
RcHm_v2.0_Chr4g0403161 Rosa chinensis HOM05D003776 ORTHO05D004459 1.5e-09 67.8 107 46.7
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 3.3e-09 66.6 88 47.7
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.8e-08 63.5 58 56.9
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 5.8e-06 55.8 107 38.3


User provided reference genes

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