Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1874.0 958 100.0
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1809.3 960 96.0
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1809.3 962 95.7
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1805.0 960 95.8
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1800.8 958 95.4
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1687.5 961 89.8
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1681.4 958 89.4
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1675.6 955 89.4
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1631.3 959 85.4
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1608.2 956 84.5
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1605.5 983 83.4
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1602.8 958 84.7
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1597.4 963 83.8
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1595.5 910 85.5
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1592.4 960 84.3
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1591.6 910 85.2
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1582.8 958 83.1
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1582.4 959 83.4
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1581.2 957 83.4
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1579.7 909 84.0
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1578.1 960 83.4
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1575.1 957 83.0
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1574.7 956 83.3
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1573.1 960 82.4
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1572.8 957 82.9
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1572.4 960 82.9
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1568.9 957 83.1
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1568.5 957 82.8
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1568.1 959 82.4
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1568.1 960 82.5
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1565.4 956 83.2
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1564.7 961 83.5
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1563.9 968 82.9
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1562.7 956 82.8
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1562.4 960 82.4
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1562.0 956 82.7
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1560.4 956 82.2
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1558.5 960 82.0
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1558.1 955 82.7
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1558.1 956 82.3
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1557.7 958 83.4
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1557.3 956 82.5
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1557.0 959 81.5
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1556.2 963 81.7
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1555.8 958 82.5
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1553.1 958 82.3
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1552.3 958 81.6
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1550.8 958 81.8
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1550.0 911 83.0
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1546.9 956 82.0
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1544.6 960 80.8
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1543.1 956 80.6
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1532.3 962 81.3
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1528.8 957 80.4
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1527.7 962 81.1
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1523.1 961 79.1
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1521.9 961 79.0
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1521.9 918 81.6
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1518.4 965 78.5
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1514.2 958 80.0
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1513.4 969 80.3
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1513.0 959 79.5
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1512.7 957 81.1
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1508.8 962 79.4
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1507.3 975 78.1
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1502.6 958 79.0
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1501.1 957 79.5
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1501.1 963 77.8
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1499.2 955 77.9
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1495.3 917 77.4
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1493.8 961 79.3
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1493.4 955 77.6
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1491.1 988 76.3
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1486.1 939 77.0
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1477.2 964 78.6
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1473.4 973 76.7
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1472.6 915 78.0
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1469.5 983 76.6
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1468.8 969 77.3
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1466.4 985 76.4
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1466.4 985 76.4
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1466.1 1183 66.6
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1465.7 970 76.4
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1462.6 963 77.7
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1459.9 963 76.9
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1455.3 957 76.8
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1454.9 970 76.4
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1449.1 979 76.1
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1449.1 957 77.8
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1447.2 960 76.7
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1446.4 951 76.8
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1444.1 960 76.8
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1443.7 918 77.3
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1442.6 960 75.1
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1441.8 982 75.4
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1439.1 960 76.4
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1437.2 827 84.5
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1429.1 956 73.7
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1419.1 910 78.6
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1400.6 842 80.4
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1396.3 964 75.4
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1388.2 962 70.8
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1383.6 960 72.2
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1371.3 922 73.0
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1363.2 955 70.4
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1336.6 920 72.2
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1331.6 908 70.7
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1323.9 930 71.9
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1322.0 955 70.2
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1315.8 784 83.9
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1306.6 786 81.9
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1252.7 725 83.9
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1245.3 921 66.4
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1187.2 786 72.1
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1176.4 685 85.3
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1173.7 939 63.6
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 0.0e+00 1130.9 955 62.1
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 0.0e+00 1129.8 953 59.8
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 0.0e+00 1119.8 950 58.4
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 0.0e+00 1112.8 965 59.1
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 0.0e+00 1090.9 725 78.3
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 1.7e-294 1016.1 662 76.9
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 9.1e-280 967.2 781 59.9
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 2.3e-275 952.6 673 74.4
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 5.9e-271 937.9 500 93.2
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 3.8e-270 935.3 592 78.7
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.1e-253 880.6 560 77.1
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 1.1e-253 880.6 521 84.3
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 7.1e-240 834.7 598 72.6
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 6.0e-215 751.9 441 87.8
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.1e-184 651.4 386 82.4
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 3.2e-184 649.8 402 83.3
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 1.3e-177 627.9 1036 37.7
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 1.4e-150 538.1 409 65.3
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 1.3e-145 521.5 415 61.4
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 1.2e-143 515.0 821 38.1
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 1.4e-126 458.4 480 54.8
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 3.1e-118 430.6 253 81.8
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 1.9e-115 421.4 223 89.2
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 5.3e-110 403.3 1052 28.0
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 1.7e-105 388.3 279 69.5
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 1.2e-101 375.6 249 74.7
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 7.6e-101 372.9 837 32.1
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 1.0e-92 345.9 253 67.6
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 1.0e-92 345.9 253 67.6
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 1.8e-89 335.1 365 45.5
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 2.9e-84 317.8 290 60.0
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.6e-77 294.7 241 68.0
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 1.6e-58 232.3 148 73.0
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 1.6e-53 215.7 169 56.2
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 2.7e-50 204.9 159 62.3
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 2.7e-50 204.9 159 62.3
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 8.3e-47 193.4 139 65.5
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 1.1e-43 183.0 103 83.5
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 9.4e-43 179.9 169 52.7
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.0e-41 176.4 118 69.5
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 3.4e-40 171.4 141 52.5
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 1.1e-38 166.4 99 80.8
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 3.8e-36 157.9 221 44.3
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 8.6e-36 156.8 111 68.5
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.2e-34 152.9 76 90.8
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 3.6e-34 151.4 76 89.5
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.7e-34 151.0 75 92.0
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 4.7e-34 151.0 88 83.0
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 8.0e-34 150.2 76 89.5
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.2e-32 146.4 80 87.5
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 3.4e-32 144.8 78 84.6
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 3.4e-32 144.8 101 75.2
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 2.9e-31 141.7 147 51.0
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 1.0e-28 133.3 120 54.2
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 2.9e-28 131.7 78 79.5
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 2.1e-26 125.6 65 90.8
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 2.8e-26 125.2 119 51.3
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 8.9e-25 120.2 124 49.2
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 2.2e-23 115.5 130 50.8
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 5.6e-19 100.9 82 68.3
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 2.0e-16 92.4 320 25.0
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 1.1e-11 76.6 56 64.3
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 8.1e-10 70.5 46 63.0
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 8.9e-09 67.0 130 37.7
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 4.4e-08 64.7 42 69.0
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 1.7e-07 62.8 48 56.2


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