Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p038477 Quercus lobata HOM05D006129 ORTHO05D007446 2.2e-199 698.7 353 100.0
QL11p038411 Quercus lobata HOM05D006129 ORTHO05D007446 1.6e-80 303.9 212 76.9
CiPaw.05G055300 Carya illinoinensis HOM05D006129 ORTHO05D007446 2.3e-42 177.2 205 53.2
Cfa005424 Carpinus fangiana HOM05D006129 ORTHO05D007446 2.8e-40 170.2 202 52.0
Haze_01881 Corylus avellana HOM05D006129 ORTHO05D007446 3.0e-39 166.8 201 52.7
MD10G1089000 Malus domestica HOM05D006129 ORTHO05D007446 6.0e-35 152.5 208 49.5
Manes.17G094600 Manihot esculenta HOM05D006129 ORTHO05D007446 2.3e-31 140.6 222 43.7
Prupe.8G116000 Prunus persica HOM05D006129 ORTHO05D007446 5.2e-31 139.4 166 51.2
Cpa.g.sc62.53 Carica papaya HOM05D006129 ORTHO05D007446 8.9e-31 138.7 229 43.7
CSS0025307 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 9.8e-30 135.2 215 43.3
CSS0048591 Camellia sinensis var. sinensis HOM05D006129 ORTHO05D007446 9.8e-30 135.2 215 43.3
Thecc.02G095400 Theobroma cacao HOM05D006129 ORTHO05D007446 1.7e-29 134.4 205 46.8
PGR042G1055 Punica granatum HOM05D006129 ORTHO05D007446 6.4e-29 132.5 181 44.2
CANSAT25G2181 Cannabis sativa HOM05D006129 ORTHO05D007446 1.1e-28 131.7 213 44.6
RcHm_v2.0_Chr6g0259211 Rosa chinensis HOM05D006129 ORTHO05D007446 1.4e-28 131.3 73 78.1
GSVIVG01031785001 Vitis vinifera HOM05D006129 ORTHO05D007446 1.4e-28 131.3 170 47.6
TWI79G0519 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 2.4e-28 130.6 173 46.2
Atru.BG.82.p Acer truncatum HOM05D006129 ORTHO05D007446 3.2e-28 130.2 73 79.5
FvH4_2g06900 Fragaria vesca HOM05D006129 ORTHO05D007446 4.1e-28 129.8 73 76.7
FAN15G2181 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.1e-28 129.8 73 76.7
FAN24G2628 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.1e-28 129.8 73 76.7
FAN27G0179 Fragaria x ananassa HOM05D006129 ORTHO05D007446 4.1e-28 129.8 73 76.7
Actinidia12976 Actinidia chinensis HOM05D006129 ORTHO05D007446 5.4e-28 129.4 209 40.7
Glyma.20G009700 Glycine max HOM05D006129 ORTHO05D007446 2.7e-27 127.1 140 50.7
Lalb_Chr10g0095451 Lupinus albus HOM05D006129 ORTHO05D007446 2.7e-27 127.1 165 46.7
Gohir.A01G005900 Gossypium hirsutum HOM05D006129 ORTHO05D007446 4.6e-27 126.3 73 74.0
Gohir.D01G006000 Gossypium hirsutum HOM05D006129 ORTHO05D007446 4.6e-27 126.3 73 74.0
Gorai.002G007000 Gossypium raimondii HOM05D006129 ORTHO05D007446 4.6e-27 126.3 73 74.0
COL.COLO4_11724 Corchorus olitorius HOM05D006129 ORTHO05D007446 1.7e-26 124.4 80 67.5
DCAR_003623 Daucus carota HOM05D006129 ORTHO05D007446 3.0e-26 123.6 70 77.1
Dinv23594 Davidia involucrata HOM05D006129 ORTHO05D007446 8.6e-26 122.1 72 75.0
Lsat_1_v5_gn_5_113460 Lactuca sativa HOM05D006129 ORTHO05D007446 8.6e-26 122.1 204 43.1
Psat6g001360 Pisum sativum HOM05D006129 ORTHO05D007446 1.5e-25 121.3 181 44.8
Lj5P206T15 Lonicera japonica HOM05D006129 ORTHO05D007446 1.9e-25 120.9 70 75.7
Duzib248G0151 Durio zibethinus HOM05D006129 ORTHO05D007446 3.3e-25 120.2 203 43.8
TWI31G0609 Tripterygium wilfordii HOM05D006129 ORTHO05D007446 3.3e-25 120.2 203 40.9
TAR371G0476 Trochodendron aralioides HOM05D006129 ORTHO05D007446 3.3e-25 120.2 220 41.8
Ciclev10027854m.g Citrus clementina HOM05D006129 ORTHO05D007446 4.3e-25 119.8 73 71.2
MELO3C026699.2 Cucumis melo HOM05D006129 ORTHO05D007446 4.3e-25 119.8 170 42.4
Phvul.002G308800 Phaseolus vulgaris HOM05D006129 ORTHO05D007446 4.3e-25 119.8 165 47.3
Eucgr.L01320 Eucalyptus grandis HOM05D006129 ORTHO05D007446 5.6e-25 119.4 182 44.0
Glyma.07G178800 Glycine max HOM05D006129 ORTHO05D007446 5.6e-25 119.4 141 51.1
Dinv42121 Davidia involucrata HOM05D006129 ORTHO05D007446 7.3e-25 119.0 182 42.9
TPR.G26422 Trifolium pratense HOM05D006129 ORTHO05D007446 7.3e-25 119.0 153 45.1
Potri.009G106800 Populus trichocarpa HOM05D006129 ORTHO05D007446 9.5e-25 118.6 168 46.4
Sabra09G0081600 Salix brachista HOM05D006129 ORTHO05D007446 9.5e-25 118.6 139 50.4
SGA_v2.0_scaffold58G20604 Striga asiatica HOM05D006129 ORTHO05D007446 9.5e-25 118.6 70 70.0
Peaxi162Scf00789g00530 Petunia axillaris HOM05D006129 ORTHO05D007446 1.6e-24 117.9 177 42.4
ECA234G4125 Erigeron canadensis HOM05D006129 ORTHO05D007446 2.8e-24 117.1 73 71.2
Eucgr.L00820 Eucalyptus grandis HOM05D006129 ORTHO05D007446 2.8e-24 117.1 179 43.6
vmacro02172 Vaccinium macrocarpon HOM05D006129 ORTHO05D007446 3.6e-24 116.7 189 42.9
Sc08g0000140 Simmondsia chinensis HOM05D006129 ORTHO05D007446 6.2e-24 115.9 163 46.0
AL3G47590 Arabidopsis lyrata HOM05D006129 ORTHO05D007446 8.1e-24 115.5 204 40.2
Cc02_g18430 Coffea canephora HOM05D006129 ORTHO05D007446 8.1e-24 115.5 70 71.4
Nn4g23272 Nelumbo nucifera HOM05D006129 ORTHO05D007446 8.1e-24 115.5 220 39.1
Thhalv10022548m.g Eutrema salsugineum HOM05D006129 ORTHO05D007446 1.1e-23 115.2 67 70.1
HPP92_022045 Vanilla planifolia HOM05D006129 ORTHO05D007446 1.1e-23 115.2 80 63.8
AT2G15820 Arabidopsis thaliana HOM05D006129 ORTHO05D007446 1.8e-23 114.4 210 39.0
CsaV3_3G028800 Cucumis sativus L. HOM05D006129 ORTHO05D007446 1.8e-23 114.4 171 44.4
Migut.B00306 Erythranthe guttata HOM05D006129 ORTHO05D007446 1.8e-23 114.4 70 65.7
Eucgr.G01504 Eucalyptus grandis HOM05D006129 ORTHO05D007446 1.8e-23 114.4 180 43.3
Sp3g29130 Schrenkiella parvula HOM05D006129 ORTHO05D007446 1.8e-23 114.4 67 70.1
Aqoxy3G03484 Aquilegia oxysepala HOM05D006129 ORTHO05D007446 2.3e-23 114.0 174 43.7
CDE04G1903 Ceratophyllum demersum HOM05D006129 ORTHO05D007446 2.3e-23 114.0 82 63.4
Oeu057674.1 Olea europaea HOM05D006129 ORTHO05D007446 2.3e-23 114.0 162 42.6
Carub.0003s2972 Capsella rubella HOM05D006129 ORTHO05D007446 4.0e-23 113.2 205 40.5
HanXRQChr10g0303221 Helianthus annuus HOM05D006129 ORTHO05D007446 4.0e-23 113.2 205 42.0
unitig_744.g24241 Utricularia gibba HOM05D006129 ORTHO05D007446 4.0e-23 113.2 72 63.9
Ca_13480_v3 Cicer arietinum L. HOM05D006129 ORTHO05D007446 5.2e-23 112.8 149 45.6
Medtr1g026035 Medicago truncatula HOM05D006129 ORTHO05D007446 5.2e-23 112.8 154 45.5
Nitab4.5_0001453g0090 Nicotiana tabacum HOM05D006129 ORTHO05D007446 5.2e-23 112.8 168 43.5
Hund00318 Selenicereus undatus HOM05D006129 ORTHO05D007446 5.2e-23 112.8 66 71.2
CAN.G644.34 Capsicum annuum HOM05D006129 ORTHO05D007446 6.8e-23 112.5 70 64.3
Lj2g0010354 Lotus japonicus HOM05D006129 ORTHO05D007446 1.2e-22 111.7 150 45.3
Rhsim11G0169300 Rhododendron simsii HOM05D006129 ORTHO05D007446 1.5e-22 111.3 185 43.2
Nitab4.5_0007303g0010 Nicotiana tabacum HOM05D006129 ORTHO05D007446 2.6e-22 110.5 162 40.7
Solyc11g066850.3 Solanum lycopersicum HOM05D006129 ORTHO05D007446 5.8e-22 109.4 68 63.2
CARHR106180 Cardamine hirsuta HOM05D006129 ORTHO05D007446 7.5e-22 109.0 206 37.4
Aa31LG8G13380 Aethionema arabicum HOM05D006129 ORTHO05D007446 9.9e-22 108.6 182 40.1
Sed0004701 Sechium edule HOM05D006129 ORTHO05D007446 1.7e-21 107.8 170 41.2
THA.LOC104807348 Tarenaya hassleriana HOM05D006129 ORTHO05D007446 1.7e-21 107.8 228 35.1
TAR629G1760 Trochodendron aralioides HOM05D006129 ORTHO05D007446 2.2e-21 107.5 63 69.8
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 2.9e-21 107.1 221 38.0
VMungo0464G0688 Vigna mungo HOM05D006129 ORTHO05D007446 3.7e-21 106.7 164 42.7
MSTRG.20134 Avicennia marina HOM05D006129 ORTHO05D007446 4.9e-21 106.3 70 64.3
BraA07t28289Z Brassica rapa HOM05D006129 ORTHO05D007446 4.9e-21 106.3 191 40.8
BcaB03g16332 Brassica carinata HOM05D006129 ORTHO05D007446 8.3e-21 105.5 191 37.7
Os02g0702000 Oryza sativa ssp. japonica HOM05D006129 ORTHO05D007446 8.3e-21 105.5 70 67.1
Zm00001eb251880 Zea mays HOM05D006129 ORTHO05D007446 8.3e-21 105.5 70 65.7
arahy.Tifrunner.gnm1.ann1.SUMB0F Arachis hypogaea HOM05D006129 ORTHO05D007446 1.1e-20 105.1 134 44.8
BcaC06g36090 Brassica carinata HOM05D006129 ORTHO05D007446 1.1e-20 105.1 198 37.4
C07p07940 Brassica napus HOM05D006129 ORTHO05D007446 1.1e-20 105.1 198 37.4
BolC7t41212H Brassica oleracea HOM05D006129 ORTHO05D007446 1.1e-20 105.1 198 37.4
A07p04960 Brassica napus HOM05D006129 ORTHO05D007446 1.9e-20 104.4 191 39.8
TAR371G0058 Trochodendron aralioides HOM05D006129 ORTHO05D007446 7.8e-19 99.0 208 40.4
AUR62011424 Chenopodium quinoa HOM05D006129 ORTHO05D007446 8.6e-18 95.5 66 63.6
AUR62016636 Chenopodium quinoa HOM05D006129 ORTHO05D007446 1.1e-17 95.1 66 62.1
ATR0665G475 Amborella trichopoda HOM05D006129 ORTHO05D007446 2.5e-17 94.0 107 43.9
Ah.01g006750 Amaranthus hybridus HOM05D006129 ORTHO05D007446 3.3e-17 93.6 66 59.1
EL10Ac9g21818 Beta vulgaris HOM05D006129 ORTHO05D007446 2.1e-16 90.9 174 38.5
Atru.chr5.2820 Acer truncatum HOM05D006129 ORTHO05D007446 2.4e-15 87.4 167 38.9
RcHm_v2.0_Chr6g0302241 Rosa chinensis HOM05D006129 ORTHO05D007446 6.8e-15 85.9 60 60.0
Atru.chr5.2887 Acer truncatum HOM05D006129 ORTHO05D007446 2.6e-14 84.0 78 51.3
arahy.Tifrunner.gnm1.ann1.769PPM Arachis hypogaea HOM05D006129 ORTHO05D007446 2.6e-14 84.0 122 41.8
SEGI_31419 Sequoiadendron giganteum HOM05D006129 ORTHO05D007446 2.6e-14 84.0 114 38.6
Atru.chr5.2881 Acer truncatum HOM05D006129 ORTHO05D007446 9.9e-14 82.0 90 47.8
RcHm_v2.0_Chr1g0376021 Rosa chinensis HOM05D006129 ORTHO05D007446 2.4e-12 77.4 53 64.2
RcHm_v2.0_Chr2g0152801 Rosa chinensis HOM05D006129 ORTHO05D007446 1.6e-11 74.7 55 63.6
Atru.chr5.2826 Acer truncatum HOM05D006129 ORTHO05D007446 6.0e-11 72.8 176 36.9
Atru.chr5.2823 Acer truncatum HOM05D006129 ORTHO05D007446 6.6e-10 69.3 87 46.0
AagrBONN_evm.TU.Sc2ySwM_344.5085 Anthoceros agrestis HOM05D006129 ORTHO05D007446 5.2e-07 59.7 81 39.5
PGSC0003DMG400026525 Solanum tuberosum HOM05D006129 ORTHO05D007446 5.2e-07 59.7 35 68.6
Sopen11g026560 Solanum pennellii HOM05D006129 ORTHO05D007446 4.4e-06 56.6 35 65.7


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