Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL11p026821 Quercus lobata HOM05D061260 ORTHO05D009743 0.0e+00 1164.1 572 100.0
QL11p026859 Quercus lobata HOM05D061260 ORTHO05D009743 1.2e-194 683.7 389 85.9
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 7.6e-72 275.8 423 40.7
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 5.6e-43 179.9 411 34.1
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 9.0e-41 172.6 365 32.6
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-39 167.9 355 32.4
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 1.2e-37 162.2 345 35.1
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 1.6e-37 161.8 295 34.2
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 6.0e-37 159.8 387 32.6
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 3.1e-33 147.5 361 31.3
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 3.9e-28 130.6 364 31.3
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 3.9e-28 130.6 360 30.6
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 7.4e-27 126.3 332 31.6
QL11p003115 Quercus lobata HOM05D010066 ORTHO05D009743 2.2e-26 124.8 360 28.3
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 8.2e-26 122.9 413 27.6
QL12p038612 Quercus lobata HOM05D002048 ORTHO05D002146 4.1e-25 120.6 234 39.7
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 5.3e-25 120.2 414 27.3
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.6e-24 117.9 314 31.2
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 5.0e-23 113.6 336 29.2
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 2.1e-21 108.2 318 30.5
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 1.5e-19 102.1 363 27.0
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-19 101.3 343 28.0
Dinv44932 Davidia involucrata HOM05D002048 ORTHO05D002146 2.8e-18 97.8 183 41.5
MD08G1078500 Malus domestica HOM05D002048 ORTHO05D002146 3.1e-17 94.4 217 35.5
Duzib116G0418 Durio zibethinus HOM05D002048 ORTHO05D002146 5.3e-17 93.6 229 33.6
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 6.9e-17 93.2 313 27.8
Prupe.1G419400 Prunus persica HOM05D002048 ORTHO05D002146 2.0e-16 91.7 226 34.5
Cfa013740 Carpinus fangiana HOM05D002048 ORTHO05D002146 2.6e-16 91.3 190 38.9
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 7.7e-16 89.7 275 29.1
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-15 89.0 289 25.6
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 3.8e-15 87.4 166 31.9
MD15G1065300 Malus domestica HOM05D002048 ORTHO05D002146 8.5e-15 86.3 219 33.8
Haze_22392 Corylus avellana HOM05D002048 ORTHO05D002146 1.1e-14 85.9 192 37.5
Haze_22400 Corylus avellana HOM05D002048 ORTHO05D002146 1.1e-14 85.9 192 37.5
FAN20G2176 Fragaria x ananassa HOM05D002048 ORTHO05D002146 3.2e-14 84.3 209 31.6
RcHm_v2.0_Chr6g0309991 Rosa chinensis HOM05D002048 ORTHO05D002146 3.2e-14 84.3 210 31.9
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 9.4e-14 82.8 212 29.7
Atru.chr13.868 Acer truncatum HOM05D002048 ORTHO05D002146 1.2e-13 82.4 214 33.6
FAN15G3319 Fragaria x ananassa HOM05D002048 ORTHO05D002146 1.2e-13 82.4 210 31.0
FAN27G3457 Fragaria x ananassa HOM05D002048 ORTHO05D002146 1.2e-13 82.4 210 31.0
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 1.6e-13 82.0 134 36.6
vmacro21418 Vaccinium macrocarpon HOM05D002048 ORTHO05D002146 2.1e-13 81.6 214 35.0
CiPaw.08G052200 Carya illinoinensis HOM05D002048 ORTHO05D002146 2.7e-13 81.3 159 39.0
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 7.9e-13 79.7 231 27.7
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 1.0e-12 79.3 290 24.5
Potri.014G013100 Populus trichocarpa HOM05D002048 ORTHO05D002146 1.4e-12 79.0 224 32.1
Sabra14G0007900 Salix brachista HOM05D002048 ORTHO05D002146 1.4e-12 79.0 220 32.3
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 1.8e-12 78.6 198 29.8
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 1.8e-12 78.6 274 27.0
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 2.3e-12 78.2 224 28.1
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 3.0e-12 77.8 251 25.5
arahy.Tifrunner.gnm1.ann1.QJHX3I Arachis hypogaea HOM05D002048 ORTHO05D002146 3.9e-12 77.4 129 47.3
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 3.9e-12 77.4 110 40.0
FvH4_2g32680 Fragaria vesca HOM05D002048 ORTHO05D002146 3.9e-12 77.4 209 30.1
FAN24G0734 Fragaria x ananassa HOM05D002048 ORTHO05D002146 3.9e-12 77.4 209 30.1
Manes.18G049300 Manihot esculenta HOM05D002048 ORTHO05D002146 3.9e-12 77.4 113 48.7
CANSAT25G3132 Cannabis sativa HOM05D002048 ORTHO05D002146 5.1e-12 77.0 233 32.2
Eucgr.F02226 Eucalyptus grandis HOM05D002048 ORTHO05D002146 5.1e-12 77.0 216 30.6
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 6.7e-12 76.6 212 27.8
arahy.Tifrunner.gnm1.ann1.S90AI0 Arachis hypogaea HOM05D002048 ORTHO05D002146 1.1e-11 75.9 128 46.9
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.5e-11 75.5 227 26.9
Thecc.08G084800 Theobroma cacao HOM05D002048 ORTHO05D002146 1.5e-11 75.5 126 39.7
CARHR036140 Cardamine hirsuta HOM05D002048 ORTHO05D002146 2.0e-11 75.1 174 35.1
Nn6g34523 Nelumbo nucifera HOM05D002048 ORTHO05D002146 2.0e-11 75.1 159 39.6
COL.COLO4_28463 Corchorus olitorius HOM05D002048 ORTHO05D002146 3.3e-11 74.3 126 39.7
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 3.3e-11 74.3 358 22.6
arahy.Tifrunner.gnm1.ann1.ZAPI4Q Arachis hypogaea HOM05D002048 ORTHO05D002146 5.7e-11 73.6 128 42.2
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 9.7e-11 72.8 318 26.1
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 9.7e-11 72.8 227 27.8
Dinv25051 Davidia involucrata HOM05D011324 ORTHO05D013448 9.7e-11 72.8 221 24.9
Sc26g0004230 Simmondsia chinensis HOM05D002048 ORTHO05D002146 9.7e-11 72.8 233 27.9
ECA247G1183 Erigeron canadensis HOM05D002048 ORTHO05D002146 1.3e-10 72.4 189 32.8
Sed0026244 Sechium edule HOM05D002048 ORTHO05D002146 2.2e-10 71.6 206 30.6
GSVIVG01009302001 Vitis vinifera HOM05D002048 ORTHO05D002146 2.2e-10 71.6 229 29.3
CSS0050419 Camellia sinensis var. sinensis HOM05D002048 ORTHO05D002146 2.8e-10 71.2 222 32.9
Lj5g0025981 Lotus japonicus HOM05D002048 ORTHO05D002146 3.7e-10 70.9 155 37.4
AT1G44910 Arabidopsis thaliana HOM05D002048 ORTHO05D002146 4.8e-10 70.5 123 41.5
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 6.3e-10 70.1 227 27.3
Actinidia10220 Actinidia chinensis HOM05D002048 ORTHO05D002146 1.1e-09 69.3 113 42.5
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-09 68.9 206 31.6
AT4G39756 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 3.1e-09 67.8 122 30.3
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.1e-09 67.8 121 32.2
AL1G52580 Arabidopsis lyrata HOM05D002048 ORTHO05D002146 4.1e-09 67.4 123 40.7
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 4.1e-09 67.4 54 50.0
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 4.1e-09 67.4 53 50.9
HanXRQChr10g0295361 Helianthus annuus HOM05D002048 ORTHO05D002146 4.1e-09 67.4 152 34.2
MELO3C016837.2 Cucumis melo HOM05D002048 ORTHO05D002146 5.3e-09 67.0 209 31.1
Glyma.14G089078 Glycine max HOM05D002048 ORTHO05D002146 5.3e-09 67.0 227 30.0
Gohir.A06G025500 Gossypium hirsutum HOM05D002048 ORTHO05D002146 7.0e-09 66.6 202 33.2
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 7.0e-09 66.6 147 36.1
TWI56G0554 Tripterygium wilfordii HOM05D002048 ORTHO05D002146 7.0e-09 66.6 113 41.6
AL7G11590 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 9.1e-09 66.2 100 34.0
Carub.0001s3541 Capsella rubella HOM05D002048 ORTHO05D002146 1.2e-08 65.9 123 39.0
Lsat_1_v5_gn_1_581 Lactuca sativa HOM05D002048 ORTHO05D002146 1.6e-08 65.5 191 31.4
COL.COLO4_31615 Corchorus olitorius HOM05D052704 ORTHO05D044704 2.0e-08 65.1 110 30.9
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 2.0e-08 65.1 54 48.1
DCAR_020063 Daucus carota HOM05D002048 ORTHO05D002146 2.6e-08 64.7 135 36.3
Rhsim10G0137100 Rhododendron simsii HOM05D000374 ORTHO05D013046 3.5e-08 64.3 284 24.3
TAR381G0254 Trochodendron aralioides HOM05D002048 ORTHO05D002146 3.5e-08 64.3 129 39.5
ClCG05G026560 Citrullus lanatus HOM05D002048 ORTHO05D002146 4.5e-08 63.9 208 29.8
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 4.5e-08 63.9 54 48.1
Gorai.010G027200 Gossypium raimondii HOM05D002048 ORTHO05D002146 4.5e-08 63.9 153 37.9
Sp1g33780 Schrenkiella parvula HOM05D002048 ORTHO05D002146 4.5e-08 63.9 136 37.5
A10p07170 Brassica napus HOM05D002048 ORTHO05D002146 5.9e-08 63.5 174 31.6
BraA01t00052Z Brassica rapa HOM05D000249 ORTHO05D000206 5.9e-08 63.5 216 24.5
AUR62022344 Chenopodium quinoa HOM05D002048 ORTHO05D002146 5.9e-08 63.5 158 32.9
Ca_06979_v3 Cicer arietinum L. HOM05D002048 ORTHO05D002146 5.9e-08 63.5 117 41.0
Glyma.17G233000 Glycine max HOM05D002048 ORTHO05D002146 5.9e-08 63.5 229 30.1
Aa31LG7G10080 Aethionema arabicum HOM05D002048 ORTHO05D002146 7.7e-08 63.2 168 34.5
C01p00590 Brassica napus HOM05D000249 ORTHO05D000206 7.7e-08 63.2 57 43.9
Thhalv10011212m.g Eutrema salsugineum HOM05D002048 ORTHO05D002146 7.7e-08 63.2 123 39.0
QL11p055520 Quercus lobata HOM05D025344 ORTHO05D009743 7.7e-08 63.2 275 26.9
CARHR247150 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.0e-07 62.8 57 43.9
EL10Ac1g01692 Beta vulgaris HOM05D002048 ORTHO05D002146 1.3e-07 62.4 145 33.1
Phvul.001G029800 Phaseolus vulgaris HOM05D002048 ORTHO05D002146 1.3e-07 62.4 140 36.4
EL10Ac9g22179 Beta vulgaris HOM05D002048 ORTHO05D002146 1.7e-07 62.0 80 47.5
BcaB07g33906 Brassica carinata HOM05D002048 ORTHO05D002146 1.7e-07 62.0 181 30.9
AUR62034362 Chenopodium quinoa HOM05D002048 ORTHO05D002146 1.7e-07 62.0 158 32.3
Gohir.D06G022600 Gossypium hirsutum HOM05D002048 ORTHO05D002146 1.7e-07 62.0 153 37.3
Lalb_Chr22g0355781 Lupinus albus HOM05D002048 ORTHO05D002146 1.7e-07 62.0 123 40.7
Rhsim06G0064500 Rhododendron simsii HOM05D002048 ORTHO05D002146 1.7e-07 62.0 53 58.5
A01p00450 Brassica napus HOM05D000249 ORTHO05D000206 2.2e-07 61.6 182 24.7
BraA10t42967Z Brassica rapa HOM05D002048 ORTHO05D002146 2.2e-07 61.6 172 31.4
Lsat_1_v5_gn_6_108420 Lactuca sativa HOM05D002048 ORTHO05D002146 2.9e-07 61.2 78 43.6
Manes.10G086900 Manihot esculenta HOM05D002048 ORTHO05D002146 2.9e-07 61.2 126 37.3
Rhsim12G0158900 Rhododendron simsii HOM05D000374 ORTHO05D000238 2.9e-07 61.2 284 22.9
BraA01t01074Z Brassica rapa HOM05D000249 ORTHO05D000206 3.8e-07 60.8 146 30.1
Nn5g30660 Nelumbo nucifera HOM05D002048 ORTHO05D002146 3.8e-07 60.8 107 40.2
Thecc.02G119900 Theobroma cacao HOM05D002048 ORTHO05D002146 3.8e-07 60.8 180 33.9
A01p11270 Brassica napus HOM05D000249 ORTHO05D000206 5.0e-07 60.5 146 30.1
ATR0564G474 Amborella trichopoda HOM05D002048 ORTHO05D002146 6.5e-07 60.1 116 39.7
Aqoxy6G02485 Aquilegia oxysepala HOM05D002048 ORTHO05D002146 6.5e-07 60.1 139 40.3
AL7G11960 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.5e-07 60.1 91 33.0
AT4G35120 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 6.5e-07 60.1 70 41.4
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 6.5e-07 60.1 206 25.7
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.5e-07 59.7 112 34.8
Carub.0007s0144 Capsella rubella HOM05D000249 ORTHO05D000206 8.5e-07 59.7 123 30.9
CARHR225340 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.1e-06 59.3 67 38.8
Oeu047227.1 Olea europaea HOM05D002048 ORTHO05D002146 1.1e-06 59.3 110 36.4
BcaNung05811 Brassica carinata HOM05D000249 ORTHO05D000206 1.5e-06 58.9 85 34.1
BolC1t00060H Brassica oleracea HOM05D000249 ORTHO05D000206 1.5e-06 58.9 85 34.1
A01p11300 Brassica napus HOM05D000249 ORTHO05D000206 1.9e-06 58.5 144 27.1
BraA01t01072Z Brassica rapa HOM05D000249 ORTHO05D000206 1.9e-06 58.5 64 39.1
Carub.0007s0257 Capsella rubella HOM05D000249 ORTHO05D000206 1.9e-06 58.5 92 33.7
AUR62027023 Chenopodium quinoa HOM05D002048 ORTHO05D002146 1.9e-06 58.5 72 45.8
Cc07_g16260 Coffea canephora HOM05D000249 ORTHO05D000206 1.9e-06 58.5 100 34.0
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 1.9e-06 58.5 191 27.7
Sp7g36330 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.9e-06 58.5 88 35.2
AT4G39550 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 2.5e-06 58.2 93 34.4
C01p27570 Brassica napus HOM05D000249 ORTHO05D000206 2.5e-06 58.2 98 37.8
Carub.0007s0165 Capsella rubella HOM05D000249 ORTHO05D000206 2.5e-06 58.2 91 33.0
Thhalv10029143m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.5e-06 58.2 112 29.5
THA.LOC104807020 Tarenaya hassleriana HOM05D002048 ORTHO05D002146 2.5e-06 58.2 65 49.2
HPP92_002487 Vanilla planifolia HOM05D002048 ORTHO05D002146 2.5e-06 58.2 141 32.6
AT4G39753 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 3.2e-06 57.8 58 43.1
BcaNung00278 Brassica carinata HOM05D000249 ORTHO05D000206 3.2e-06 57.8 86 38.4
BcaNung05812 Brassica carinata HOM05D000249 ORTHO05D000206 3.2e-06 57.8 113 30.1
C01p27690 Brassica napus HOM05D000249 ORTHO05D000206 3.2e-06 57.8 98 36.7
BolC1t00061H Brassica oleracea HOM05D000249 ORTHO05D000206 3.2e-06 57.8 113 30.1
CsaV3_4G035260 Cucumis sativus L. HOM05D002048 ORTHO05D002146 3.2e-06 57.8 92 38.0
AT5G39560 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 4.2e-06 57.4 84 38.1
BcaNung01786 Brassica carinata HOM05D000249 ORTHO05D000206 4.2e-06 57.4 145 26.9
C03p78270 Brassica napus HOM05D000249 ORTHO05D000206 4.2e-06 57.4 59 45.8
BolC3t20085H Brassica oleracea HOM05D000249 ORTHO05D000206 4.2e-06 57.4 59 45.8
CARHR285960 Cardamine hirsuta HOM05D000249 ORTHO05D000206 4.2e-06 57.4 100 32.0
BcaC09g50224 Brassica carinata HOM05D000249 ORTHO05D000206 5.5e-06 57.0 64 45.3
A08p14570 Brassica napus HOM05D000249 ORTHO05D000206 5.5e-06 57.0 59 40.7
C03p82270 Brassica napus HOM05D000249 ORTHO05D000206 5.5e-06 57.0 59 40.7
BolC3t20525H Brassica oleracea HOM05D000249 ORTHO05D000206 5.5e-06 57.0 59 40.7
BraA08t33443Z Brassica rapa HOM05D000249 ORTHO05D000206 5.5e-06 57.0 59 40.7
QL11p051993 Quercus lobata HOM05D004115 ORTHO05D005004 5.5e-06 57.0 111 40.5
QL11p055703 Quercus lobata HOM05D033527 ORTHO05D009743 5.5e-06 57.0 106 34.9
AT2G44630 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 7.2e-06 56.6 137 29.9
A08p23370 Brassica napus HOM05D000249 ORTHO05D000206 7.2e-06 56.6 91 31.9
BraA08t34291Z Brassica rapa HOM05D000249 ORTHO05D000206 7.2e-06 56.6 91 31.9
TAR625G1475 Trochodendron aralioides HOM05D002048 ORTHO05D002146 7.2e-06 56.6 128 36.7
VMungo0647G0326 Vigna mungo HOM05D002048 ORTHO05D002146 7.2e-06 56.6 94 40.4
CARHR247160 Cardamine hirsuta HOM05D000249 ORTHO05D000206 9.4e-06 56.2 90 37.8
Thhalv10025415m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 9.4e-06 56.2 107 34.6
Zm00001eb162920 Zea mays HOM05D002048 ORTHO05D002146 9.4e-06 56.2 133 33.8


User provided reference genes

Program Settings