Gene: AT4G39550

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G39550
  • Transcript Identifier AT4G39550.1
  • Gene Type Coding gene
  • Location Chr4 : 18380681-18381859 : negative

Gene Family Information

  • ID HOM05D000249
  • #Genes/#Species 1698/85
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G39550.1
  • uniprot Q9SVA3

Descriptions

  • Description Galactose oxidase/kelch repeat superfamily protein
  • Computational description Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G49000.2); Has 3208 Blast hits to 2568 proteins in 139 species: Archae - 6; Bacteria - 164; Metazoa - 1656; Fungi - 7; Plants - 1275; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR015915 Kelch-type beta propeller
IPR036047 F-box-like domain superfamily
IPR006652 Kelch repeat type 1
Mapman id Description
35.1 not assigned.annotated