Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL05p061027 Quercus lobata HOM05D005565 ORTHO05D006950 3.3e-196 688.3 385 100.0
Cfa000824 Carpinus fangiana HOM05D005565 ORTHO05D006950 1.4e-159 566.6 386 84.7
CiPaw.10G085900 Carya illinoinensis HOM05D005565 ORTHO05D006950 6.7e-157 557.8 392 83.4
RcHm_v2.0_Chr5g0015891 Rosa chinensis HOM05D005565 ORTHO05D006950 2.2e-155 552.7 394 82.7
FAN21G3355 Fragaria x ananassa HOM05D005565 ORTHO05D006950 4.5e-153 545.0 392 81.9
FAN11G0475 Fragaria x ananassa HOM05D005565 ORTHO05D006950 1.3e-152 543.5 394 82.0
Prupe.4G089800 Prunus persica HOM05D005565 ORTHO05D006950 1.3e-152 543.5 391 82.4
FvH4_3g10030 Fragaria vesca HOM05D005565 ORTHO05D006950 8.5e-152 540.8 394 81.7
FAN16G1178 Fragaria x ananassa HOM05D005565 ORTHO05D006950 1.9e-151 539.7 398 80.9
CsaV3_6G052300 Cucumis sativus L. HOM05D005565 ORTHO05D006950 8.8e-149 530.8 385 80.3
MD05G1274000 Malus domestica HOM05D005565 ORTHO05D006950 1.5e-148 530.0 389 79.4
CANSAT35G0106 Cannabis sativa HOM05D005565 ORTHO05D006950 8.2e-147 524.2 388 79.6
Duzib192G0128 Durio zibethinus HOM05D005565 ORTHO05D006950 5.9e-145 518.1 394 78.4
VMungo0251G3128 Vigna mungo HOM05D005565 ORTHO05D006950 5.9e-145 518.1 387 79.1
Thecc.06G001100 Theobroma cacao HOM05D005565 ORTHO05D006950 1.0e-144 517.3 392 78.8
Cpa.g.sc17.91 Carica papaya HOM05D005565 ORTHO05D006950 1.3e-144 516.9 392 78.1
THA.LOC104812687 Tarenaya hassleriana HOM05D005565 ORTHO05D006950 1.9e-143 513.1 386 79.3
MELO3C007079.2 Cucumis melo HOM05D005565 ORTHO05D006950 9.4e-143 510.8 405 76.0
TWI53G0754 Tripterygium wilfordii HOM05D005565 ORTHO05D006950 9.4e-143 510.8 391 78.8
Dinv06439 Davidia involucrata HOM05D005565 ORTHO05D006950 2.1e-142 509.6 385 78.2
TAR626G1362 Trochodendron aralioides HOM05D005565 ORTHO05D006950 2.1e-142 509.6 399 78.2
Glyma.07G224200 Glycine max HOM05D005565 ORTHO05D006950 3.6e-142 508.8 395 78.5
CANSAT35G0536 Cannabis sativa HOM05D005565 ORTHO05D006950 6.1e-142 508.1 386 78.2
Gorai.011G004100 Gossypium raimondii HOM05D005565 ORTHO05D006950 1.8e-141 506.5 390 77.9
Medtr4g083380 Medicago truncatula HOM05D005565 ORTHO05D006950 1.8e-141 506.5 396 77.0
Gohir.A10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 2.3e-141 506.1 393 77.6
ClCG01G025100 Citrullus lanatus HOM05D005565 ORTHO05D006950 6.7e-141 504.6 385 77.9
Phvul.002G100900 Phaseolus vulgaris HOM05D005565 ORTHO05D006950 2.2e-139 499.6 387 76.0
Aa31LG6G11740 Aethionema arabicum HOM05D005565 ORTHO05D006950 1.1e-138 497.3 386 77.5
Aqoxy1G01543 Aquilegia oxysepala HOM05D005565 ORTHO05D006950 1.8e-138 496.5 399 73.7
CARHR029890 Cardamine hirsuta HOM05D005565 ORTHO05D006950 1.2e-137 493.8 388 75.8
Nn3g20239 Nelumbo nucifera HOM05D005565 ORTHO05D006950 1.2e-137 493.8 395 75.2
Actinidia13472 Actinidia chinensis HOM05D005565 ORTHO05D006950 2.2e-136 489.6 394 74.6
Psat7g132960 Pisum sativum HOM05D005565 ORTHO05D006950 2.9e-136 489.2 456 67.5
Sp1g26320 Schrenkiella parvula HOM05D005565 ORTHO05D006950 1.1e-135 487.3 388 76.3
MD10G1253700 Malus domestica HOM05D005565 ORTHO05D006950 2.5e-135 486.1 388 75.3
HPP92_019891 Vanilla planifolia HOM05D005565 ORTHO05D006950 5.5e-135 485.0 388 75.5
Atru.chr10.872 Acer truncatum HOM05D005565 ORTHO05D006950 1.2e-134 483.8 390 76.4
Sed0002078 Sechium edule HOM05D005565 ORTHO05D006950 2.7e-134 482.6 385 74.3
Sc17g0004650 Simmondsia chinensis HOM05D005565 ORTHO05D006950 4.7e-134 481.9 401 74.1
Ca_18788_v3 Cicer arietinum L. HOM05D005565 ORTHO05D006950 1.4e-133 480.3 391 68.3
AT1G30480 Arabidopsis thaliana HOM05D005565 ORTHO05D006950 4.0e-133 478.8 393 74.8
Carub.0001s2870 Capsella rubella HOM05D005565 ORTHO05D006950 4.0e-133 478.8 389 74.0
Glyma.20G024100 Glycine max HOM05D005565 ORTHO05D006950 4.0e-133 478.8 398 73.6
Lj1A1162G46 Lonicera japonica HOM05D005565 ORTHO05D006950 6.7e-133 478.0 389 73.8
Lj4g0020694 Lotus japonicus HOM05D005565 ORTHO05D006950 5.7e-132 474.9 399 74.2
SHI20681 Sapria himalayana HOM05D005565 ORTHO05D006950 2.2e-131 473.0 387 73.6
MBI10_g00722_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 6.3e-131 471.5 394 74.4
arahy.Tifrunner.gnm1.ann1.V3UUHR Arachis hypogaea HOM05D005565 ORTHO05D006950 4.1e-130 468.8 401 72.6
arahy.Tifrunner.gnm1.ann1.59WFQY Arachis hypogaea HOM05D005565 ORTHO05D006950 7.0e-130 468.0 401 72.6
Manes.06G055100 Manihot esculenta HOM05D005565 ORTHO05D006950 9.1e-130 467.6 386 73.6
Thhalv10007861m.g Eutrema salsugineum HOM05D005565 ORTHO05D006950 2.7e-129 466.1 392 74.0
C03p76800 Brassica napus HOM05D005565 ORTHO05D006950 3.5e-129 465.7 385 73.2
COL.COLO4_26828 Corchorus olitorius HOM05D005565 ORTHO05D006950 1.7e-128 463.4 388 67.8
CSS0026797 Camellia sinensis var. sinensis HOM05D005565 ORTHO05D006950 8.5e-128 461.1 395 70.9
Potri.001G372600 Populus trichocarpa HOM05D005565 ORTHO05D006950 5.5e-127 458.4 386 73.1
Sabra11G0084800 Salix brachista HOM05D005565 ORTHO05D006950 6.1e-126 454.9 413 67.6
PSO541G0264 Papaver somniferum HOM05D005565 ORTHO05D006950 8.0e-126 454.5 408 71.1
A08p24410 Brassica napus HOM05D005565 ORTHO05D006950 1.4e-125 453.8 385 71.2
Eucgr.D00186 Eucalyptus grandis HOM05D005565 ORTHO05D006950 1.4e-125 453.8 395 69.9
Sabra11G0091000 Salix brachista HOM05D005565 ORTHO05D006950 1.8e-125 453.4 413 67.3
Manes.14G122600 Manihot esculenta HOM05D005565 ORTHO05D006950 2.3e-125 453.0 380 70.3
Zm00001eb315350 Zea mays HOM05D005565 ORTHO05D006950 6.8e-125 451.4 395 69.1
PGR083G1318 Punica granatum HOM05D005565 ORTHO05D006950 1.2e-124 450.7 392 72.4
Lsat_1_v5_gn_1_117781 Lactuca sativa HOM05D005565 ORTHO05D006950 1.5e-124 450.3 402 70.1
PSO675G3222 Papaver somniferum HOM05D005565 ORTHO05D006950 2.6e-124 449.5 408 68.9
Zm00001eb376390 Zea mays HOM05D005565 ORTHO05D006950 7.0e-122 441.4 390 67.4
Potri.011G098100 Populus trichocarpa HOM05D005565 ORTHO05D006950 1.6e-121 440.3 337 76.0
Sabra16G0245100 Salix brachista HOM05D005565 ORTHO05D006950 6.5e-120 434.9 445 63.1
Rhsim13G0120300 Rhododendron simsii HOM05D005565 ORTHO05D006950 1.5e-119 433.7 390 71.5
vmacro03395 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 1.5e-119 433.7 396 69.7
DCAR_027864 Daucus carota HOM05D005565 ORTHO05D006950 1.2e-118 430.6 396 67.9
Hma1.2p1_0333F.1_g128300 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 1.5e-116 423.7 406 67.5
AL1G44510 Arabidopsis lyrata HOM05D005565 ORTHO05D006950 2.6e-116 422.9 395 68.4
EL10Ac8g19576 Beta vulgaris HOM05D005565 ORTHO05D006950 7.5e-116 421.4 406 67.7
BolC3t19934H Brassica oleracea HOM05D005565 ORTHO05D006950 1.4e-114 417.2 384 68.5
BcaNung05264 Brassica carinata HOM05D005565 ORTHO05D006950 2.7e-113 412.9 384 68.0
SEGI_17605 Sequoiadendron giganteum HOM05D005565 ORTHO05D006950 4.5e-113 412.1 412 61.4
BcaNung05265 Brassica carinata HOM05D005565 ORTHO05D006950 5.9e-113 411.8 360 65.3
Cc09_g08070 Coffea canephora HOM05D005565 ORTHO05D006950 1.3e-112 410.6 401 65.8
A09p35980 Brassica napus HOM05D005565 ORTHO05D006950 1.5e-111 407.1 385 67.8
BraA09t39122Z Brassica rapa HOM05D005565 ORTHO05D006950 1.5e-111 407.1 385 67.8
HanXRQChr01g0003371 Helianthus annuus HOM05D005565 ORTHO05D006950 2.8e-110 402.9 405 62.5
Oeu041100.1 Olea europaea HOM05D005565 ORTHO05D006950 1.4e-109 400.6 398 66.1
Mapoly0023s0048 Marchantia polymorpha HOM05D005565 ORTHO05D006950 1.3e-107 394.0 449 58.6
ATR0165G027 Amborella trichopoda HOM05D005565 ORTHO05D006950 2.9e-107 392.9 408 63.0
CAN.G954.26 Capsicum annuum HOM05D005565 ORTHO05D006950 9.2e-106 387.9 395 66.1
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 9.2e-106 387.9 394 64.7
ECA240G3173 Erigeron canadensis HOM05D005565 ORTHO05D006950 1.7e-104 383.6 394 64.7
Haze_05807 Corylus avellana HOM05D005565 ORTHO05D006950 3.0e-104 382.9 295 81.7
Os01g0526100 Oryza sativa ssp. japonica HOM05D005565 ORTHO05D006950 1.1e-103 380.9 299 71.6
MSTRG.14795 Avicennia marina HOM05D005565 ORTHO05D006950 2.8e-102 376.3 402 63.7
Solyc02g069790.3 Solanum lycopersicum HOM05D005565 ORTHO05D006950 8.0e-102 374.8 408 61.5
PGSC0003DMG400021191 Solanum tuberosum HOM05D005565 ORTHO05D006950 8.0e-102 374.8 402 61.9
Sopen02g018950 Solanum pennellii HOM05D005565 ORTHO05D006950 1.1e-101 374.4 406 61.8
Pp3c2_18610 Physcomitrium patens HOM05D005565 ORTHO05D006950 5.2e-101 372.1 430 58.6
Oeu015183.1 Olea europaea HOM05D005565 ORTHO05D006950 1.9e-98 363.6 394 61.9
AUR62042519 Chenopodium quinoa HOM05D005565 ORTHO05D006950 1.6e-97 360.5 393 55.5
SGA_v2.0_scaffold1G00240 Striga asiatica HOM05D005565 ORTHO05D006950 3.5e-97 359.4 395 61.3
SGA_v2.0_scaffold223G42860 Striga asiatica HOM05D005565 ORTHO05D006950 1.1e-95 354.4 397 60.2
Migut.H01333 Erythranthe guttata HOM05D005565 ORTHO05D006950 4.3e-95 352.4 396 61.1
Peaxi162Scf00670g00348 Petunia axillaris HOM05D005565 ORTHO05D006950 4.0e-93 345.9 404 58.7
AagrBONN_evm.TU.Sc2ySwM_228.4814 Anthoceros agrestis HOM05D005565 ORTHO05D006950 8.3e-91 338.2 426 49.3
Gohir.D10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 9.5e-87 324.7 293 74.4
FAN25G2018 Fragaria x ananassa HOM05D005565 ORTHO05D006950 3.1e-85 319.7 187 86.6
GSVIVG01021628001 Vitis vinifera HOM05D005565 ORTHO05D006950 5.8e-84 315.5 170 91.8
BcaB07g32683 Brassica carinata HOM05D005565 ORTHO05D006950 5.4e-82 308.9 384 55.7
BraA08t34396Z Brassica rapa HOM05D005565 ORTHO05D006950 1.2e-81 307.8 383 56.1
CBR_g29718 Chara braunii HOM05D005565 ORTHO05D006950 1.5e-79 300.8 468 48.7
Nitab4.5_0004596g0030 Nicotiana tabacum HOM05D005565 ORTHO05D006950 7.6e-76 288.5 212 70.3
BcaB07g32657 Brassica carinata HOM05D005565 ORTHO05D006950 1.7e-75 287.3 171 84.2
C05p29480 Brassica napus HOM05D005565 ORTHO05D006950 1.7e-75 287.3 171 84.2
BolC5t31678H Brassica oleracea HOM05D005565 ORTHO05D006950 1.7e-75 287.3 171 84.2
MBI18_g10581_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 1.6e-73 280.8 299 58.2
Lalb_Chr05g0219831 Lupinus albus HOM05D005565 ORTHO05D006950 9.6e-71 271.6 388 46.1
SMO351G0200 Selaginella moellendorffii HOM05D005565 ORTHO05D006950 2.2e-67 260.4 303 53.8
CDE10G1151 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 1.1e-66 258.1 397 49.1
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 1.2e-65 254.6 174 79.3
CDE10G1222 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 3.5e-65 253.1 148 82.4
Dinv23083 Davidia involucrata HOM05D005565 ORTHO05D006950 6.0e-65 252.3 295 63.4
BcaC01g00198 Brassica carinata HOM05D005565 ORTHO05D006950 1.8e-61 240.7 143 83.9
Haze_05809 Corylus avellana HOM05D005565 ORTHO05D006950 1.5e-47 194.5 101 91.1
MCO12G324 Micromonas commoda HOM05D005565 ORTHO05D006950 3.7e-46 189.9 428 37.6
AUR62027340 Chenopodium quinoa HOM05D005565 ORTHO05D006950 2.9e-43 180.3 268 47.4
Cre11.g467591 Chlamydomonas reinhardtii HOM05D005565 ORTHO05D006950 2.9e-43 180.3 496 35.9
Hma1.2p1_0333F.1_g128290 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 7.2e-42 175.6 98 83.7
BcaB07g32658 Brassica carinata HOM05D005565 ORTHO05D006950 2.3e-40 170.6 97 80.4
TPR.G34068 Trifolium pratense HOM05D005565 ORTHO05D006950 8.8e-40 168.7 192 68.2
Haze_26712 Corylus avellana HOM05D005565 ORTHO05D006950 4.8e-38 162.9 289 38.1
Nitab4.5_0002719g0090 Nicotiana tabacum HOM05D005565 ORTHO05D006950 4.8e-38 162.9 97 78.4
C07p15100 Brassica napus HOM05D005565 ORTHO05D006950 1.1e-34 151.8 101 74.3
BcaC01g00197 Brassica carinata HOM05D005565 ORTHO05D006950 1.3e-22 111.7 182 55.5
PRCOL_00005056 Prasinoderma coloniale HOM05D005565 ORTHO05D006950 1.3e-22 111.7 197 40.1
Ciclev10018985m.g Citrus clementina HOM05D000565 ORTHO05D003973 7.7e-20 102.4 121 54.5
CDE10G0349 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 3.8e-19 100.1 71 74.6
CBR_g23080 Chara braunii HOM05D005565 ORTHO05D006950 3.2e-18 97.1 97 48.5
SGA_v2.0_scaffold22G09881 Striga asiatica HOM05D005565 ORTHO05D006950 6.1e-17 92.8 97 48.5
SGA_v2.0_scaffold273G46430 Striga asiatica HOM05D005565 ORTHO05D402892 2.7e-12 77.4 119 45.4
SGA_v2.0_scaffold74G24562 Striga asiatica HOM05D005565 ORTHO05D401758 7.7e-12 75.9 118 44.9
CBR_g28574 Chara braunii HOM05D000409 ORTHO05D001956 2.7e-09 67.4 101 35.6
SMO348G0102 Selaginella moellendorffii HOM05D001563 ORTHO05D001956 3.6e-09 67.0 108 32.4
SEGI_22204 Sequoiadendron giganteum HOM05D001563 ORTHO05D001956 3.6e-09 67.0 102 36.3
CBR_g28575 Chara braunii HOM05D001563 ORTHO05D001956 6.1e-09 66.2 103 35.9
CBR_g28571 Chara braunii HOM05D001563 ORTHO05D001956 1.4e-08 65.1 101 35.6
Mapoly0038s0101 Marchantia polymorpha HOM05D001563 ORTHO05D001956 1.8e-08 64.7 108 32.4
Solyc12g008750.3 Solanum lycopersicum HOM05D001563 ORTHO05D001956 6.8e-08 62.8 103 30.1
Sopen12g003680 Solanum pennellii HOM05D001563 ORTHO05D001956 6.8e-08 62.8 103 30.1
PGSC0003DMG400000344 Solanum tuberosum HOM05D001563 ORTHO05D001956 1.2e-07 62.0 103 30.1
Ca_19741_v3 Cicer arietinum L. HOM05D001563 ORTHO05D001956 2.0e-07 61.2 101 34.7
Nitab4.5_0005471g0020 Nicotiana tabacum HOM05D001563 ORTHO05D001956 2.6e-07 60.8 103 30.1
Nitab4.5_0000540g0190 Nicotiana tabacum HOM05D001563 ORTHO05D001956 3.4e-07 60.5 103 30.1
AagrBONN_evm.TU.Sc2ySwM_117.747 Anthoceros agrestis HOM05D001563 ORTHO05D001956 4.4e-07 60.1 104 32.7
ATR0680G241 Amborella trichopoda HOM05D001563 ORTHO05D001956 5.7e-07 59.7 107 30.8
BcaB08g37174 Brassica carinata HOM05D002097 ORTHO05D002248 5.7e-07 59.7 111 28.8
ECA232G2130 Erigeron canadensis HOM05D001563 ORTHO05D001956 7.5e-07 59.3 102 32.4
MCO15G197 Micromonas commoda HOM05D002097 ORTHO05D004937 7.5e-07 59.3 106 33.0
SEGI_35596 Sequoiadendron giganteum HOM05D001563 ORTHO05D001956 7.5e-07 59.3 103 32.0
Dinv26814 Davidia involucrata HOM05D001563 ORTHO05D001956 9.8e-07 58.9 100 34.0
Os11g0636900 Oryza sativa ssp. japonica HOM05D001563 ORTHO05D001956 9.8e-07 58.9 143 27.3
Peaxi162Scf00498g00117 Petunia axillaris HOM05D001563 ORTHO05D001956 9.8e-07 58.9 103 29.1
SMO201G0011 Selaginella moellendorffii HOM05D001563 ORTHO05D001956 1.3e-06 58.5 135 34.8
Lalb_Chr15g0080491 Lupinus albus HOM05D001563 ORTHO05D001956 2.2e-06 57.8 100 31.0
Dinv20611 Davidia involucrata HOM05D001563 ORTHO05D001956 2.8e-06 57.4 100 31.0
Lsat_1_v5_gn_4_153381 Lactuca sativa HOM05D001563 ORTHO05D012319 2.8e-06 57.4 101 29.7
SGA_v2.0_scaffold2G01114 Striga asiatica HOM05D001563 ORTHO05D001956 2.8e-06 57.4 129 27.1
SGA_v2.0_scaffold221G42757 Striga asiatica HOM05D001563 ORTHO05D001956 3.7e-06 57.0 100 29.0
CANSAT35G1515 Cannabis sativa HOM05D001563 ORTHO05D001956 4.8e-06 56.6 116 29.3
Nitab4.5_0004596g0040 Nicotiana tabacum HOM05D005565 ORTHO05D006950 4.8e-06 56.6 58 60.3
Phvul.005G001300 Phaseolus vulgaris HOM05D001563 ORTHO05D001956 4.8e-06 56.6 100 30.0
CDE04G0453 Ceratophyllum demersum HOM05D001563 ORTHO05D001956 6.3e-06 56.2 101 29.7
Aqoxy6G01047 Aquilegia oxysepala HOM05D001563 ORTHO05D001956 8.3e-06 55.8 101 35.6
MELO3C013338.2 Cucumis melo HOM05D002097 ORTHO05D002248 8.3e-06 55.8 95 29.5
Glyma.04G255700 Glycine max HOM05D001563 ORTHO05D001956 8.3e-06 55.8 100 30.0


User provided reference genes

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