Gene: Sabra11G0084800

General Information

Structural Information

Species Salix brachista
Gene Identifier Sabra11G0084800
Transcript Identifier Sabra11G0084800.1
Gene Type Coding gene
Location GWHAAZH00000011 : 11316374-11319272 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005565
#Genes/#Species 138/95
Phylogenetic origin

ID ORTHO05D006950
#Genes/#Species 136/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Sabra11G0084800.1
Accession GWHGAAZH018454
Accession GWHTAAZH018454

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045292	IEA	InterPro	mRNA cis splicing, via spliceosome
GO:0006281	ISO	PLAZA Integrative Orthology	DNA repair	AT1G30480
GO:0043484	ISO	PLAZA Integrative Orthology	regulation of RNA splicing	AT1G30480

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G30480
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G30480

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000467	G-patch domain
IPR034653	SPF45, RNA recognition motif
IPR003954	RNA recognition motif domain, eukaryote
IPR040052	Splicing factor 45
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
IPR035979	RNA-binding domain superfamily

Mapman id	Description
16.2.1.2.8	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SFPS/DRT111)