Gene: TPR.G34068
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G34068
- Transcript Identifier TPR.T35215
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG2 : 28491076-28493450 : negative
Gene Family Information
- ID HOM05D005565
- #Genes/#Species 138/95
- Phylogenetic origin
- ID ORTHO05D006950
- #Genes/#Species 136/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA35215.v2
- id Tp57577_TGAC_v2_gene34068.v2
- pacid 35970409
- uniprot A0A2K3KTG6
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045292 | IEA | GOA Database | mRNA cis splicing, via spliceosome | |
| GO:0045292 | IEA | InterPro | mRNA cis splicing, via spliceosome | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G30480 |
| GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT1G30480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D005565 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G30480 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G30480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040052 | Splicing factor 45 |
| Mapman id | Description |
|---|---|
| 16.2.1.2.8 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SFPS/DRT111) |