Gene: Cfa000824
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa000824
- Transcript Identifier Cfa000824.t1
- Gene Type Coding gene
- Location Cfa01 : 8523098-8530079 : negative
Gene Family Information
- ID HOM05D005565
- #Genes/#Species 138/95
- Phylogenetic origin
- ID ORTHO05D006950
- #Genes/#Species 136/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Cfa000824.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045292 | IEA | InterPro | mRNA cis splicing, via spliceosome | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G30480 |
| GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT1G30480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G30480 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G30480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR000467 | G-patch domain |
| IPR040052 | Splicing factor 45 |
| IPR003954 | RNA recognition motif domain, eukaryote |
| IPR035979 | RNA-binding domain superfamily |
| IPR034653 | SPF45, RNA recognition motif |
| Mapman id | Description |
|---|---|
| 16.2.1.2.8 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SFPS/DRT111) |