Gene: SGA_v2.0_scaffold1G00240

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold1G00240
  • Transcript Identifier SGA_v2.0_scaffold1T00240
  • Gene Type Coding gene
  • Location scaffold1 : 1662209-1664649 : positive

Gene Family Information

  • ID HOM05D005565
  • #Genes/#Species 138/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Splicing factor 45
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045292
IEA
InterPromRNA cis splicing, via spliceosome
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G30480
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT1G30480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G30480
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G30480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040052 Splicing factor 45
IPR003954 RNA recognition motif domain, eukaryote
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR034653 SPF45, RNA recognition motif
IPR000467 G-patch domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.1.2.8 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing factor (SFPS/DRT111)