Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
QL04p095957 Quercus lobata HOM05D001072 ORTHO05D006807 9.4e-95 350.1 171 100.0
QL01p025823 Quercus lobata HOM05D001072 ORTHO05D006807 1.0e-88 330.1 165 97.0
Haze_24430 Corylus avellana HOM05D001072 ORTHO05D006807 4.7e-70 268.1 164 78.7
CiPaw.13G067600 Carya illinoinensis HOM05D001072 ORTHO05D006807 4.0e-61 238.4 164 73.2
Dinv09685 Davidia involucrata HOM05D001072 ORTHO05D006807 7.6e-52 207.6 163 62.0
Dinv12245 Davidia involucrata HOM05D001072 ORTHO05D006807 7.6e-52 207.6 163 62.0
MD03G1058100 Malus domestica HOM05D001072 ORTHO05D006807 1.7e-51 206.5 165 63.0
RcHm_v2.0_Chr5g0071961 Rosa chinensis HOM05D001072 ORTHO05D006807 2.4e-50 202.6 164 61.0
Prupe.6G045900 Prunus persica HOM05D001072 ORTHO05D006807 7.1e-50 201.1 164 61.0
Atru.chr1.2576 Acer truncatum HOM05D001072 ORTHO05D006807 3.9e-48 195.3 164 56.7
FAN21G1089 Fragaria x ananassa HOM05D001072 ORTHO05D006807 3.9e-48 195.3 166 57.2
vmacro02906 Vaccinium macrocarpon HOM05D001072 ORTHO05D006807 6.6e-48 194.5 164 57.3
FAN25G0381 Fragaria x ananassa HOM05D001072 ORTHO05D006807 8.6e-48 194.1 163 58.3
FAN11G0037 Fragaria x ananassa HOM05D001072 ORTHO05D006807 2.5e-47 192.6 163 57.1
FAN16G0450 Fragaria x ananassa HOM05D001072 ORTHO05D006807 2.5e-47 192.6 163 57.1
FvH4_3g39950 Fragaria vesca HOM05D001072 ORTHO05D006807 5.6e-47 191.4 163 56.4
Potri.019G126000 Populus trichocarpa HOM05D001072 ORTHO05D006807 2.1e-46 189.5 166 56.0
CSS0014731 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 2.8e-46 189.1 166 56.6
CSS0035690 Camellia sinensis var. sinensis HOM05D001072 ORTHO05D006807 2.8e-46 189.1 166 56.6
Ca_05680_v3 Cicer arietinum L. HOM05D001072 ORTHO05D006807 1.8e-45 186.4 166 54.2
Rhsim13G0062700 Rhododendron simsii HOM05D001072 ORTHO05D006807 3.1e-45 185.7 163 55.8
Actinidia32600 Actinidia chinensis HOM05D001072 ORTHO05D006807 3.4e-44 182.2 159 58.5
Ciclev10000015m.g Citrus clementina HOM05D001072 ORTHO05D006807 3.4e-44 182.2 163 52.1
Lj2A1095G44 Lonicera japonica HOM05D001072 ORTHO05D006807 3.4e-44 182.2 163 54.6
Sabra19G0124000 Salix brachista HOM05D001072 ORTHO05D006807 1.3e-43 180.3 166 54.2
Sabra19G0130600 Salix brachista HOM05D001072 ORTHO05D006807 1.3e-43 180.3 166 54.2
TAR623G0321 Trochodendron aralioides HOM05D001072 ORTHO05D006807 4.2e-42 175.3 172 51.7
Phvul.008G250900 Phaseolus vulgaris HOM05D001072 ORTHO05D006807 5.4e-42 174.9 164 53.0
TWI31G1315 Tripterygium wilfordii HOM05D001072 ORTHO05D006807 7.1e-42 174.5 159 52.8
VMungo0647G0153 Vigna mungo HOM05D001072 ORTHO05D006807 7.1e-42 174.5 168 53.0
TAR623G1063 Trochodendron aralioides HOM05D001072 ORTHO05D006807 1.2e-41 173.7 172 51.2
Gorai.003G151000 Gossypium raimondii HOM05D001072 ORTHO05D006807 1.6e-41 173.3 168 51.8
Thecc.09G359500 Theobroma cacao HOM05D001072 ORTHO05D006807 1.6e-41 173.3 166 54.8
Psat2g054080 Pisum sativum HOM05D001072 ORTHO05D006807 2.1e-41 172.9 166 48.8
Gohir.D03G143700 Gossypium hirsutum HOM05D001072 ORTHO05D006807 2.7e-41 172.6 168 51.8
TPR.G25340 Trifolium pratense HOM05D001072 ORTHO05D006807 2.7e-41 172.6 162 52.5
Manes.18G136800 Manihot esculenta HOM05D001072 ORTHO05D006807 4.6e-41 171.8 163 54.6
Gohir.A03G024800 Gossypium hirsutum HOM05D001072 ORTHO05D006807 1.3e-40 170.2 168 51.8
Oeu050029.1 Olea europaea HOM05D001072 ORTHO05D006807 1.3e-40 170.2 167 49.7
Cpa.g.sc2.338 Carica papaya HOM05D001072 ORTHO05D006807 3.9e-40 168.7 164 48.8
arahy.Tifrunner.gnm1.ann1.QD7CJP Arachis hypogaea HOM05D001072 ORTHO05D006807 5.1e-40 168.3 166 51.2
Duzib168G2177 Durio zibethinus HOM05D001072 ORTHO05D006807 1.5e-39 166.8 164 52.4
arahy.Tifrunner.gnm1.ann1.XX59BG Arachis hypogaea HOM05D001072 ORTHO05D006807 1.9e-39 166.4 166 50.6
Glyma.02G232900 Glycine max HOM05D001072 ORTHO05D006807 4.3e-39 165.2 166 49.4
CANSAT54G0981 Cannabis sativa HOM05D001072 ORTHO05D006807 4.8e-38 161.8 165 50.3
Nn2g11057 Nelumbo nucifera HOM05D001072 ORTHO05D006807 4.8e-38 161.8 170 47.6
COL.COLO4_11172 Corchorus olitorius HOM05D001072 ORTHO05D006807 8.1e-38 161.0 168 52.4
MSTRG.21246 Avicennia marina HOM05D001072 ORTHO05D006807 2.6e-36 156.0 164 45.1
Migut.D00839 Erythranthe guttata HOM05D001072 ORTHO05D006807 2.6e-36 156.0 166 46.4
Lalb_Chr04g0251881 Lupinus albus HOM05D001072 ORTHO05D006807 2.6e-36 156.0 166 48.8
CsaV3_1G036730 Cucumis sativus L. HOM05D001072 ORTHO05D006807 8.4e-35 151.0 160 50.0
LjContig00141g0020287 Lotus japonicus HOM05D001072 ORTHO05D006807 8.4e-35 151.0 166 45.8
Cc01_g15000 Coffea canephora HOM05D001072 ORTHO05D006807 1.4e-34 150.2 163 49.7
MELO3C020494.2 Cucumis melo HOM05D001072 ORTHO05D006807 1.9e-34 149.8 160 49.4
Medtr5g074510 Medicago truncatula HOM05D001072 ORTHO05D006807 5.4e-34 148.3 165 46.7
SGA_v2.0_scaffold20G09297 Striga asiatica HOM05D001072 ORTHO05D006807 5.4e-34 148.3 164 43.3
Peaxi162Scf00055g00202 Petunia axillaris HOM05D001072 ORTHO05D006807 1.2e-33 147.1 161 47.8
Eucgr.J01850 Eucalyptus grandis HOM05D001072 ORTHO05D006807 1.6e-33 146.7 154 49.4
Sopen09g017350 Solanum pennellii HOM05D001072 ORTHO05D006807 3.5e-33 145.6 161 46.0
PGSC0003DMG402017675 Solanum tuberosum HOM05D001072 ORTHO05D006807 7.8e-33 144.4 161 44.7
ClCG03G000170 Citrullus lanatus HOM05D001072 ORTHO05D006807 2.3e-32 142.9 160 47.5
PGR119G0697 Punica granatum HOM05D001072 ORTHO05D006807 3.0e-32 142.5 161 46.0
Solyc09g055260.4 Solanum lycopersicum HOM05D001072 ORTHO05D006807 3.9e-32 142.1 161 44.7
Lsat_1_v5_gn_8_108741 Lactuca sativa HOM05D001072 ORTHO05D006807 8.7e-32 141.0 157 44.6
MBI03_g13043_MAGBIO Magnolia biondii HOM05D001072 ORTHO05D006807 1.9e-31 139.8 175 44.0
Sc06g0008120 Simmondsia chinensis HOM05D001072 ORTHO05D006807 1.9e-31 139.8 166 41.0
AUR62028316 Chenopodium quinoa HOM05D001072 ORTHO05D006807 2.5e-31 139.4 169 42.0
Sed0011357 Sechium edule HOM05D001072 ORTHO05D006807 3.3e-31 139.0 160 47.5
Nitab4.5_0000046g0010 Nicotiana tabacum HOM05D001072 ORTHO05D006807 5.6e-31 138.3 168 42.9
AUR62025311 Chenopodium quinoa HOM05D001072 ORTHO05D006807 9.6e-31 137.5 163 42.9
PSO170G6524 Papaver somniferum HOM05D001072 ORTHO05D006807 9.6e-31 137.5 166 41.6
PSO017G5353 Papaver somniferum HOM05D001072 ORTHO05D006807 1.3e-30 137.1 166 41.6
EL10Ac8g18974 Beta vulgaris HOM05D001072 ORTHO05D006807 2.1e-30 136.3 170 41.2
DCAR_018643 Daucus carota HOM05D001072 ORTHO05D006807 1.1e-29 134.0 163 42.3
Hund08884 Selenicereus undatus HOM05D001072 ORTHO05D006807 5.3e-29 131.7 161 41.6
Nitab4.5_0000684g0150 Nicotiana tabacum HOM05D001072 ORTHO05D006807 6.9e-29 131.3 168 39.9
ECA236G3191 Erigeron canadensis HOM05D001072 ORTHO05D006807 9.0e-29 131.0 160 43.1
Ca_27012_v3 Cicer arietinum L. HOM05D000103 ORTHO05D006807 1.2e-28 130.6 166 41.6
HanXRQChr10g0312111 Helianthus annuus HOM05D001072 ORTHO05D006807 5.8e-28 128.3 164 44.5
ATR0681G329 Amborella trichopoda HOM05D001072 ORTHO05D006807 5.4e-26 121.7 176 39.8
Aqoxy4G02167 Aquilegia oxysepala HOM05D001072 ORTHO05D006807 5.4e-26 121.7 168 42.3
THA.LOC104810689 Tarenaya hassleriana HOM05D001072 ORTHO05D006807 3.5e-25 119.0 163 41.1
Thhalv10012416m.g Eutrema salsugineum HOM05D001072 ORTHO05D006807 1.1e-23 114.0 164 39.6
HPP92_012011 Vanilla planifolia HOM05D001072 ORTHO05D006807 1.1e-23 114.0 180 38.3
BcaB08g36177 Brassica carinata HOM05D001072 ORTHO05D006807 1.9e-23 113.2 163 39.9
A03p12250 Brassica napus HOM05D001072 ORTHO05D006807 2.5e-23 112.8 163 37.4
A10p15850 Brassica napus HOM05D001072 ORTHO05D006807 4.3e-23 112.1 163 39.9
BraA10t43640Z Brassica rapa HOM05D001072 ORTHO05D006807 4.3e-23 112.1 163 39.9
BcaC04g19869 Brassica carinata HOM05D001072 ORTHO05D006807 5.6e-23 111.7 163 39.9
C09p50300 Brassica napus HOM05D001072 ORTHO05D006807 5.6e-23 111.7 163 39.9
Carub.0008s1900 Capsella rubella HOM05D001072 ORTHO05D006807 9.6e-23 110.9 163 38.0
unitig_0.g201 Utricularia gibba HOM05D001072 ORTHO05D006807 1.6e-22 110.2 157 40.1
Aa31LG11G200 Aethionema arabicum HOM05D001072 ORTHO05D006807 2.1e-22 109.8 164 39.6
C03p14380 Brassica napus HOM05D001072 ORTHO05D006807 2.1e-22 109.8 163 37.4
BolC3t13881H Brassica oleracea HOM05D001072 ORTHO05D006807 2.1e-22 109.8 163 37.4
BraA03t10536Z Brassica rapa HOM05D001072 ORTHO05D006807 2.1e-22 109.8 163 37.4
Sp6g20090 Schrenkiella parvula HOM05D001072 ORTHO05D006807 2.8e-22 109.4 163 38.7
AL8G34570 Arabidopsis lyrata HOM05D001072 ORTHO05D006807 3.7e-22 109.0 163 39.3
BcaB01g04524 Brassica carinata HOM05D001072 ORTHO05D006807 3.7e-22 109.0 147 40.8
BolC9t57885H Brassica oleracea HOM05D001072 ORTHO05D006807 8.1e-22 107.8 163 38.7
AT5G58410 Arabidopsis thaliana HOM05D001072 ORTHO05D006807 1.1e-21 107.5 160 38.1
CARHR272240 Cardamine hirsuta HOM05D001072 ORTHO05D006807 1.1e-21 107.5 163 39.3
Cpa.g.sc2.314 Carica papaya HOM05D001072 ORTHO05D006807 3.1e-21 105.9 125 41.6
Oeu050026.1 Olea europaea HOM05D001072 ORTHO05D006807 3.8e-19 99.0 163 37.4
CDE04G3416 Ceratophyllum demersum HOM05D001072 ORTHO05D006807 2.1e-17 93.2 177 31.6
Zm00001eb093280 Zea mays HOM05D001072 ORTHO05D006807 2.1e-17 93.2 184 32.6
Os01g0977600 Oryza sativa ssp. japonica HOM05D001072 ORTHO05D006807 3.0e-16 89.4 173 31.8
AagrBONN_evm.TU.Sc2ySwM_344.918 Anthoceros agrestis HOM05D001072 ORTHO05D006807 3.0e-08 62.8 94 31.9
Mapoly0076s0060 Marchantia polymorpha HOM05D001072 ORTHO05D006807 9.7e-07 57.8 111 30.6


User provided reference genes

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