Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.6G357800 Prunus persica HOM05D000924 ORTHO05D021115 1.5e-62 242.7 120 100.0
Prupe.4G035000 Prunus persica HOM05D000924 ORTHO05D001209 4.5e-27 124.8 75 85.3
Duzib205G0140 Durio zibethinus HOM05D000924 ORTHO05D001209 1.0e-26 123.6 75 82.7
Thecc.03G100600 Theobroma cacao HOM05D000924 ORTHO05D001209 1.3e-26 123.2 75 84.0
Ciclev10018483m.g Citrus clementina HOM05D000924 ORTHO05D001209 2.2e-26 122.5 77 80.5
Dinv17404 Davidia involucrata HOM05D000924 ORTHO05D001209 3.8e-26 121.7 75 82.7
RcHm_v2.0_Chr7g0182981 Rosa chinensis HOM05D000924 ORTHO05D001209 3.8e-26 121.7 72 86.1
Oeu031662.3 Olea europaea HOM05D000924 ORTHO05D001209 5.0e-26 121.3 75 82.7
AL8G37790 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 6.5e-26 120.9 75 80.0
AT5G61140 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 6.5e-26 120.9 75 80.0
Carub.0008s2181 Capsella rubella HOM05D000924 ORTHO05D001209 6.5e-26 120.9 75 80.0
Lj5C103G8 Lonicera japonica HOM05D000924 ORTHO05D001209 6.5e-26 120.9 75 81.3
SGA_v2.0_scaffold7G04039 Striga asiatica HOM05D000924 ORTHO05D001209 1.1e-25 120.2 75 81.3
CARHR274830 Cardamine hirsuta HOM05D000924 ORTHO05D001209 1.5e-25 119.8 75 78.7
CiPaw.11G052300 Carya illinoinensis HOM05D000924 ORTHO05D001209 1.5e-25 119.8 75 80.0
Sp2g24390 Schrenkiella parvula HOM05D000924 ORTHO05D001209 1.5e-25 119.8 75 78.7
GSVIVG01007875001 Vitis vinifera HOM05D000924 ORTHO05D001209 1.5e-25 119.8 75 81.3
Thhalv10003505m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 1.9e-25 119.4 75 78.7
FvH4_5g13990 Fragaria vesca HOM05D000924 ORTHO05D001209 1.9e-25 119.4 72 84.7
FAN18G1430 Fragaria x ananassa HOM05D000924 ORTHO05D001209 1.9e-25 119.4 72 84.7
Gohir.D12G185001 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.9e-25 119.4 75 80.0
Gorai.008G198400 Gossypium raimondii HOM05D000924 ORTHO05D001209 1.9e-25 119.4 75 80.0
vmacro17602 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 1.9e-25 119.4 75 80.0
Aa31LG11G2210 Aethionema arabicum HOM05D000924 ORTHO05D001209 2.5e-25 119.0 75 77.3
MSTRG.4451 Avicennia marina HOM05D000924 ORTHO05D001209 2.5e-25 119.0 75 80.0
Cfa019322 Carpinus fangiana HOM05D000924 ORTHO05D001209 2.5e-25 119.0 75 81.3
Haze_07712 Corylus avellana HOM05D000924 ORTHO05D001209 2.5e-25 119.0 75 81.3
DCAR_011555 Daucus carota HOM05D000924 ORTHO05D001209 2.5e-25 119.0 75 80.0
Potri.015G056501 Populus trichocarpa HOM05D000924 ORTHO05D001209 2.5e-25 119.0 72 83.3
Rhsim08G0146700 Rhododendron simsii HOM05D000924 ORTHO05D001209 2.5e-25 119.0 75 80.0
Cc00_g02560 Coffea canephora HOM05D000924 ORTHO05D001209 3.2e-25 118.6 75 78.7
MD06G1201900 Malus domestica HOM05D000924 ORTHO05D001209 3.2e-25 118.6 75 80.0
C02p61380 Brassica napus HOM05D000924 ORTHO05D001209 4.2e-25 118.2 75 77.3
BolC2t12187H Brassica oleracea HOM05D000924 ORTHO05D001209 4.2e-25 118.2 75 77.3
Manes.06G085400 Manihot esculenta HOM05D000924 ORTHO05D001209 4.2e-25 118.2 75 80.0
Sed0023477 Sechium edule HOM05D000924 ORTHO05D001209 4.2e-25 118.2 72 80.6
QL10p019292 Quercus lobata HOM05D000924 ORTHO05D001209 5.5e-25 117.9 75 80.0
COL.COLO4_06748 Corchorus olitorius HOM05D000924 ORTHO05D001209 7.2e-25 117.5 75 78.7
Lsat_1_v5_gn_5_22540 Lactuca sativa HOM05D000924 ORTHO05D001209 7.2e-25 117.5 75 77.3
PGR083G0994 Punica granatum HOM05D000924 ORTHO05D001209 7.2e-25 117.5 75 77.3
THA.LOC104818343 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 7.2e-25 117.5 75 78.7
A02p41450 Brassica napus HOM05D000924 ORTHO05D001209 9.4e-25 117.1 75 76.0
BraA02t09087Z Brassica rapa HOM05D000924 ORTHO05D001209 9.4e-25 117.1 75 76.0
CANSAT80G0652 Cannabis sativa HOM05D000924 ORTHO05D001209 9.4e-25 117.1 72 81.9
Eucgr.B00583 Eucalyptus grandis HOM05D000924 ORTHO05D001209 9.4e-25 117.1 75 78.7
Migut.D01699 Erythranthe guttata HOM05D000924 ORTHO05D001209 1.2e-24 116.7 75 77.3
SalBow7G1805 Salvia bowleyana HOM05D000924 ORTHO05D001209 1.2e-24 116.7 75 77.3
Hma1.2p1_0060F.1_g033190 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 1.6e-24 116.3 75 78.7
Actinidia25776 Actinidia chinensis HOM05D000924 ORTHO05D001209 2.1e-24 115.9 75 78.7
CSS0010952 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 2.1e-24 115.9 72 80.6
CSS0043185 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 2.1e-24 115.9 72 80.6
ClCG04G011840 Citrullus lanatus HOM05D000924 ORTHO05D001209 2.1e-24 115.9 72 80.6
MELO3C002023.2 Cucumis melo HOM05D000924 ORTHO05D001209 2.1e-24 115.9 72 80.6
CsaV3_1G005930 Cucumis sativus L. HOM05D000924 ORTHO05D001209 2.1e-24 115.9 72 80.6
Glyma.06G202500 Glycine max HOM05D000924 ORTHO05D001209 2.1e-24 115.9 72 79.2
Hund09903 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.1e-24 115.9 75 77.3
Hund27624 Selenicereus undatus HOM05D000924 ORTHO05D001209 2.1e-24 115.9 75 77.3
Solyc06g069480.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 2.1e-24 115.9 118 55.9
Atru.chr9.419 Acer truncatum HOM05D000924 ORTHO05D001209 2.7e-24 115.5 75 76.0
Peaxi162Scf00013g00069 Petunia axillaris HOM05D000924 ORTHO05D001209 2.7e-24 115.5 118 56.8
Phvul.009G192100 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 2.7e-24 115.5 69 82.6
TWI60G0107 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 2.7e-24 115.5 75 77.3
VMungo1309G1347 Vigna mungo HOM05D000924 ORTHO05D001209 2.7e-24 115.5 69 82.6
Sopen06g026770 Solanum pennellii HOM05D000924 ORTHO05D001209 3.6e-24 115.2 118 55.9
Ah.11g047880 Amaranthus hybridus HOM05D000924 ORTHO05D001209 6.1e-24 114.4 75 76.0
EL10Ac5g11118 Beta vulgaris HOM05D000924 ORTHO05D001209 6.1e-24 114.4 75 76.0
Sc03g0008290 Simmondsia chinensis HOM05D000924 ORTHO05D001209 6.1e-24 114.4 75 76.0
Medtr3g025300 Medicago truncatula HOM05D000924 ORTHO05D001209 8.0e-24 114.0 72 79.2
TPR.G12162 Trifolium pratense HOM05D000924 ORTHO05D001209 8.0e-24 114.0 72 79.2
TAR622G0150 Trochodendron aralioides HOM05D000924 ORTHO05D001209 8.0e-24 114.0 72 80.6
HanXRQChr05g0157291 Helianthus annuus HOM05D000924 ORTHO05D001209 1.0e-23 113.6 75 74.7
Lalb_Chr14g0362841 Lupinus albus HOM05D000924 ORTHO05D001209 1.0e-23 113.6 72 79.2
CAN.G587.45 Capsicum annuum HOM05D000924 ORTHO05D001209 1.4e-23 113.2 72 79.2
CDE06G0248 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 1.4e-23 113.2 74 75.7
Nitab4.5_0001328g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.4e-23 113.2 72 79.2
Nitab4.5_0001688g0120 Nicotiana tabacum HOM05D000924 ORTHO05D001209 1.4e-23 113.2 72 79.2
HPP92_009486 Vanilla planifolia HOM05D000924 ORTHO05D001209 1.8e-23 112.8 75 74.7
Lj1g0003461 Lotus japonicus HOM05D000924 ORTHO05D001209 2.3e-23 112.5 69 79.7
SGA_v2.0_scaffold86G26869 Striga asiatica HOM05D000924 ORTHO05D001209 2.3e-23 112.5 75 76.0
AUR62008516 Chenopodium quinoa HOM05D000924 ORTHO05D001209 3.0e-23 112.1 75 73.3
AUR62021574 Chenopodium quinoa HOM05D000924 ORTHO05D001209 5.2e-23 111.3 75 73.3
ATR0064G009 Amborella trichopoda HOM05D000924 ORTHO05D001209 6.7e-23 110.9 72 76.4
arahy.Tifrunner.gnm1.ann1.TAYI6X Arachis hypogaea HOM05D000924 ORTHO05D001209 8.8e-23 110.5 72 76.4
Zm00001eb400270 Zea mays HOM05D000924 ORTHO05D001209 8.8e-23 110.5 72 75.0
arahy.Tifrunner.gnm1.ann1.QJ15ZQ Arachis hypogaea HOM05D000924 ORTHO05D001209 1.2e-22 110.2 72 76.4
MBI16_g05786_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 1.2e-22 110.2 72 77.8
Nn4g23416 Nelumbo nucifera HOM05D000924 ORTHO05D001209 1.2e-22 110.2 72 76.4
Aqoxy3G03623 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 1.5e-22 109.8 75 73.3
Gohir.A12G182100 Gossypium hirsutum HOM05D000924 ORTHO05D001209 3.3e-22 108.6 75 77.3
PSO017G0961 Papaver somniferum HOM05D000924 ORTHO05D001209 4.4e-22 108.2 72 76.4
PSO478G0555 Papaver somniferum HOM05D000924 ORTHO05D001209 4.4e-22 108.2 72 76.4
Aqoxy4G02207 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 1.7e-21 106.3 75 70.7
SGA_v2.0_scaffold86G26868 Striga asiatica HOM05D000924 ORTHO05D021115 2.2e-21 105.9 65 81.5
Actinidia09603 Actinidia chinensis HOM05D000924 ORTHO05D021115 1.1e-20 103.6 61 83.6
Pp3c2_9850 Physcomitrium patens HOM05D000924 ORTHO05D001209 7.0e-20 100.9 75 65.3
Sabra15G0081700 Salix brachista HOM05D000924 ORTHO05D001209 9.1e-20 100.5 72 72.2
AagrBONN_evm.TU.Sc2ySwM_228.4663 Anthoceros agrestis HOM05D000924 ORTHO05D001209 1.0e-18 97.1 75 61.3
Mapoly0046s0099 Marchantia polymorpha HOM05D000924 ORTHO05D001209 1.0e-18 97.1 72 61.1
Actinidia16119 Actinidia chinensis HOM05D000924 ORTHO05D021115 2.2e-18 95.9 60 78.3
SMO116G0141 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 2.9e-18 95.5 74 60.8
SMO195G0012 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 2.9e-18 95.5 74 60.8
CBR_g38192 Chara braunii HOM05D000924 ORTHO05D001209 4.2e-17 91.7 74 55.4
RcHm_v2.0_Chr7g0224331 Rosa chinensis HOM05D000924 ORTHO05D021115 2.3e-15 85.9 48 81.2
Cpa.g.sc94.39 Carica papaya HOM05D000924 ORTHO05D001209 5.2e-15 84.7 50 80.0
PRCOL_00000726 Prasinoderma coloniale HOM05D000924 ORTHO05D001209 7.5e-14 80.9 69 50.7
MCO14G361 Micromonas commoda HOM05D000924 ORTHO05D001209 1.7e-10 69.7 74 51.4
Prupe.3G238700 Prunus persica HOM05D000924 ORTHO05D334959 4.7e-08 61.6 86 48.8
MBI15_g36602_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 4.0e-07 58.5 68 41.2
MCO02G020 Micromonas commoda HOM05D000924 ORTHO05D001209 6.8e-07 57.8 113 31.9
FAN13G2240 Fragaria x ananassa HOM05D000924 ORTHO05D001209 8.9e-07 57.4 68 38.2
Duzib128G1905 Durio zibethinus HOM05D000924 ORTHO05D001209 1.2e-06 57.0 76 39.5
Pp3c1_35880 Physcomitrium patens HOM05D000924 ORTHO05D001209 1.2e-06 57.0 68 41.2
Cre17.g744147 Chlamydomonas reinhardtii HOM05D000924 ORTHO05D001209 1.5e-06 56.6 69 37.7
Gohir.A10G187300 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.5e-06 56.6 76 39.5
Gohir.D10G194400 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.5e-06 56.6 76 39.5
Gorai.011G217300 Gossypium raimondii HOM05D000924 ORTHO05D001209 1.5e-06 56.6 76 39.5
FvH4_6g00860 Fragaria vesca HOM05D000924 ORTHO05D001209 2.0e-06 56.2 68 38.2
FAN14G0455 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.0e-06 56.2 68 38.2
MD12G1257300 Malus domestica HOM05D000924 ORTHO05D001209 2.0e-06 56.2 73 38.4
Prupe.6G358100 Prunus persica HOM05D000924 ORTHO05D001209 2.0e-06 56.2 73 38.4
SMO347G0607 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 2.0e-06 56.2 67 41.8
BcaC01g05308 Brassica carinata HOM05D000924 ORTHO05D001209 2.6e-06 55.8 66 39.4
C03p28130 Brassica napus HOM05D000924 ORTHO05D001209 2.6e-06 55.8 66 39.4
BolC3t15183H Brassica oleracea HOM05D000924 ORTHO05D001209 2.6e-06 55.8 66 39.4
FAN14G3354 Fragaria x ananassa HOM05D000924 ORTHO05D001209 2.6e-06 55.8 69 39.1
Thecc.10G149400 Theobroma cacao HOM05D000924 ORTHO05D001209 2.6e-06 55.8 76 39.5
Ah.01g015930 Amaranthus hybridus HOM05D000924 ORTHO05D001209 3.4e-06 55.5 73 38.4
ECA246G0163 Erigeron canadensis HOM05D000924 ORTHO05D001209 3.4e-06 55.5 67 43.3
HanXRQChr12g0359471 Helianthus annuus HOM05D000924 ORTHO05D001209 3.4e-06 55.5 66 40.9
RcHm_v2.0_Chr7g0209461 Rosa chinensis HOM05D000924 ORTHO05D001209 3.4e-06 55.5 73 38.4
AT2G42270 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 4.4e-06 55.1 66 39.4
CANSAT78G0159 Cannabis sativa HOM05D000924 ORTHO05D001209 4.4e-06 55.1 73 38.4
Cpa.g.sc36.108 Carica papaya HOM05D000924 ORTHO05D001209 4.4e-06 55.1 73 38.4
AUR62024846 Chenopodium quinoa HOM05D000924 ORTHO05D001209 4.4e-06 55.1 73 39.7
AUR62032373 Chenopodium quinoa HOM05D000924 ORTHO05D001209 4.4e-06 55.1 73 39.7
Migut.N01909 Erythranthe guttata HOM05D000924 ORTHO05D001209 4.4e-06 55.1 67 40.3
FvH4_6g47200 Fragaria vesca HOM05D000924 ORTHO05D001209 4.4e-06 55.1 69 37.7
MD04G1240400 Malus domestica HOM05D000924 ORTHO05D001209 4.4e-06 55.1 73 38.4
ATR0605G032 Amborella trichopoda HOM05D000924 ORTHO05D001209 5.7e-06 54.7 67 38.8
AagrBONN_evm.TU.Sc2ySwM_344.783 Anthoceros agrestis HOM05D000924 ORTHO05D001209 5.7e-06 54.7 68 39.7
AL4G40630 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 5.7e-06 54.7 66 39.4
EL10Ac2g02545 Beta vulgaris HOM05D000924 ORTHO05D001209 5.7e-06 54.7 73 39.7
CANSAT80G1721 Cannabis sativa HOM05D000924 ORTHO05D001209 5.7e-06 54.7 73 38.4
FAN09G1765 Fragaria x ananassa HOM05D000924 ORTHO05D001209 5.7e-06 54.7 68 36.8
Lsat_1_v5_gn_3_7441 Lactuca sativa HOM05D000924 ORTHO05D001209 5.7e-06 54.7 68 41.2
Lj3g0017691 Lotus japonicus HOM05D000924 ORTHO05D001209 5.7e-06 54.7 73 38.4
RcHm_v2.0_Chr1g0335081 Rosa chinensis HOM05D000924 ORTHO05D001209 5.7e-06 54.7 66 40.9
SGA_v2.0_scaffold161G37860 Striga asiatica HOM05D000924 ORTHO05D001209 5.7e-06 54.7 67 38.8
TAR381G1514 Trochodendron aralioides HOM05D000924 ORTHO05D001209 5.7e-06 54.7 73 38.4
TAR624G1422 Trochodendron aralioides HOM05D000924 ORTHO05D001209 5.7e-06 54.7 61 41.0
Migut.C00343 Erythranthe guttata HOM05D000924 ORTHO05D001209 7.5e-06 54.3 67 40.3
Eucgr.F01825 Eucalyptus grandis HOM05D000924 ORTHO05D001209 7.5e-06 54.3 73 38.4
Glyma.08G173500 Glycine max HOM05D000924 ORTHO05D001209 7.5e-06 54.3 73 38.4
Glyma.15G253800 Glycine max HOM05D000924 ORTHO05D001209 7.5e-06 54.3 73 38.4
Nitab4.5_0002503g0090 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.5e-06 54.3 72 38.9
Nitab4.5_0003811g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.5e-06 54.3 72 38.9
Nitab4.5_0005694g0030 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.5e-06 54.3 67 38.8
Nitab4.5_0008569g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 7.5e-06 54.3 67 38.8
Psat2g149120 Pisum sativum HOM05D000924 ORTHO05D001209 7.5e-06 54.3 73 38.4
Sc15g0004020 Simmondsia chinensis HOM05D000924 ORTHO05D001209 7.5e-06 54.3 73 37.0
unitig_26.g9847 Utricularia gibba HOM05D000924 ORTHO05D001209 7.5e-06 54.3 65 43.1
MSTRG.1010 Avicennia marina HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
Cfa014157 Carpinus fangiana HOM05D000924 ORTHO05D001209 9.8e-06 53.9 73 38.4
CiPaw.07G131100 Carya illinoinensis HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
CBR_g70690 Chara braunii HOM05D000924 ORTHO05D001209 9.8e-06 53.9 59 42.4
ClCG05G006710 Citrullus lanatus HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
Cc02_g28440 Coffea canephora HOM05D000924 ORTHO05D001209 9.8e-06 53.9 66 39.4
MELO3C006732.2 Cucumis melo HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
MELO3C027093.2 Cucumis melo HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
CsaV3_3G015340 Cucumis sativus L. HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
DCAR_003081 Daucus carota HOM05D000924 ORTHO05D001209 9.8e-06 53.9 72 40.3
FAN05G2437 Fragaria x ananassa HOM05D000924 ORTHO05D001209 9.8e-06 53.9 68 36.8
Hma1.2p1_0914F.1_g236150 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 9.8e-06 53.9 66 39.4
Lj5A314T76 Lonicera japonica HOM05D000924 ORTHO05D001209 9.8e-06 53.9 66 39.4
Lj5C314G2 Lonicera japonica HOM05D000924 ORTHO05D001209 9.8e-06 53.9 66 39.4
Peaxi162Scf00064g01426 Petunia axillaris HOM05D000924 ORTHO05D001209 9.8e-06 53.9 66 39.4
Potri.012G097300 Populus trichocarpa HOM05D000924 ORTHO05D001209 9.8e-06 53.9 73 38.4
Potri.015G095500 Populus trichocarpa HOM05D000924 ORTHO05D001209 9.8e-06 53.9 73 38.4
Rhsim06G0001600 Rhododendron simsii HOM05D000924 ORTHO05D001209 9.8e-06 53.9 66 39.4
RcHm_v2.0_Chr3g0448351 Rosa chinensis HOM05D000924 ORTHO05D001209 9.8e-06 53.9 55 43.6
Sabra15G0116500 Salix brachista HOM05D000924 ORTHO05D001209 9.8e-06 53.9 73 38.4
Sed0004818 Sechium edule HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
THA.LOC104812019 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 9.8e-06 53.9 67 38.8
TWI14G0143 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 9.8e-06 53.9 73 37.0


User provided reference genes

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