Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.012G063201 Populus trichocarpa HOM05D005460 ORTHO05D008059 4.2e-92 341.3 166 100.0
Manes.06G081200 Manihot esculenta HOM05D005460 ORTHO05D008059 1.5e-60 236.5 164 71.3
Actinidia04798 Actinidia chinensis HOM05D005460 ORTHO05D008059 9.6e-60 233.8 150 74.7
TAR629G3051 Trochodendron aralioides HOM05D005460 ORTHO05D008059 2.8e-59 232.3 161 69.6
SHI17428 Sapria himalayana HOM05D005460 ORTHO05D008059 4.7e-59 231.5 144 78.5
TWI60G0358 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.4e-58 229.9 151 70.9
TWI60G1488 Tripterygium wilfordii HOM05D005460 ORTHO05D008059 1.4e-58 229.9 151 70.9
MBI16_g07042_MAGBIO Magnolia biondii HOM05D005460 ORTHO05D008059 1.8e-58 229.6 163 66.9
Cfa017734 Carpinus fangiana HOM05D005460 ORTHO05D008059 2.4e-58 229.2 150 71.3
Dinv07972 Davidia involucrata HOM05D005460 ORTHO05D008059 2.4e-58 229.2 161 69.6
Nn3g17530 Nelumbo nucifera HOM05D005460 ORTHO05D008059 3.1e-58 228.8 163 67.5
CSS0025897 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.2e-57 226.9 161 68.3
CSS0043223 Camellia sinensis var. sinensis HOM05D005460 ORTHO05D008059 1.2e-57 226.9 161 68.3
MELO3C017248.2 Cucumis melo HOM05D005460 ORTHO05D008059 2.0e-57 226.1 159 67.3
CsaV3_1G003350 Cucumis sativus L. HOM05D005460 ORTHO05D008059 2.0e-57 226.1 159 66.7
Hund09954 Selenicereus undatus HOM05D005460 ORTHO05D008059 2.0e-57 226.1 150 71.3
CiPaw.15G113700 Carya illinoinensis HOM05D005460 ORTHO05D008059 2.6e-57 225.7 161 65.8
ClCG06G015450 Citrullus lanatus HOM05D005460 ORTHO05D008059 5.8e-57 224.6 152 68.4
ECA232G2972 Erigeron canadensis HOM05D005460 ORTHO05D008059 7.6e-57 224.2 163 65.6
Hma1.2p1_2037F.1_g311990 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 7.6e-57 224.2 163 68.1
GSVIVG01008151001 Vitis vinifera HOM05D005460 ORTHO05D008059 7.6e-57 224.2 163 65.6
Gorai.007G040200 Gossypium raimondii HOM05D005460 ORTHO05D008059 9.9e-57 223.8 151 68.9
EL10Ac5g11188 Beta vulgaris HOM05D005460 ORTHO05D008059 1.3e-56 223.4 150 68.7
Oeu005512.2 Olea europaea HOM05D005460 ORTHO05D008059 2.2e-56 222.6 161 67.1
QL10p020708 Quercus lobata HOM05D005460 ORTHO05D008059 2.2e-56 222.6 163 65.0
Thecc.03G107700 Theobroma cacao HOM05D005460 ORTHO05D008059 3.8e-56 221.9 151 69.5
Lj1g0006842 Lotus japonicus HOM05D005460 ORTHO05D008059 6.4e-56 221.1 150 68.0
Duzib068G0250 Durio zibethinus HOM05D005460 ORTHO05D008059 8.4e-56 220.7 150 69.3
Gohir.D11G037400 Gossypium hirsutum HOM05D005460 ORTHO05D008059 1.1e-55 220.3 150 68.0
HanXRQChr09g0270461 Helianthus annuus HOM05D005460 ORTHO05D008059 1.4e-55 219.9 163 65.0
Gohir.A11G034000 Gossypium hirsutum HOM05D005460 ORTHO05D008059 2.4e-55 219.2 150 68.0
Sed0020336 Sechium edule HOM05D005460 ORTHO05D008059 2.4e-55 219.2 159 64.8
Sc04g0003880 Simmondsia chinensis HOM05D005460 ORTHO05D008059 2.4e-55 219.2 150 70.0
Glyma.06G206000 Glycine max HOM05D005460 ORTHO05D008059 3.2e-55 218.8 161 62.7
Ciclev10018555m.g Citrus clementina HOM05D005460 ORTHO05D008059 9.3e-55 217.2 162 64.8
Rhsim08G0141800 Rhododendron simsii HOM05D005460 ORTHO05D008059 9.3e-55 217.2 150 68.7
AUR62032136 Chenopodium quinoa HOM05D005460 ORTHO05D008059 1.2e-54 216.9 150 67.3
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea HOM05D005460 ORTHO05D008059 2.7e-54 215.7 150 68.7
DCAR_011574 Daucus carota HOM05D005460 ORTHO05D008059 2.7e-54 215.7 161 65.8
Phvul.009G203700 Phaseolus vulgaris HOM05D005460 ORTHO05D008059 4.6e-54 214.9 161 62.7
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea HOM05D005460 ORTHO05D008059 6.0e-54 214.5 150 68.0
AUR62039669 Chenopodium quinoa HOM05D005460 ORTHO05D008059 6.0e-54 214.5 150 68.0
MSTRG.22948 Avicennia marina HOM05D005460 ORTHO05D008059 1.0e-53 213.8 163 62.6
COL.COLO4_27492 Corchorus olitorius HOM05D005460 ORTHO05D008059 3.0e-53 212.2 151 65.6
Cc04_g08300 Coffea canephora HOM05D005460 ORTHO05D008059 8.7e-53 210.7 150 66.7
Eucgr.K02548 Eucalyptus grandis HOM05D005460 ORTHO05D008059 8.7e-53 210.7 167 64.1
PSO478G1652 Papaver somniferum HOM05D005460 ORTHO05D008059 8.7e-53 210.7 162 61.7
Solyc03g114780.3 Solanum lycopersicum HOM05D005460 ORTHO05D008059 8.7e-53 210.7 163 61.3
Sopen03g033860 Solanum pennellii HOM05D005460 ORTHO05D008059 8.7e-53 210.7 163 61.3
VMungo1309G0936 Vigna mungo HOM05D005460 ORTHO05D008059 8.7e-53 210.7 163 60.7
Lsat_1_v5_gn_4_113721 Lactuca sativa HOM05D005460 ORTHO05D008059 1.1e-52 210.3 161 62.1
Lalb_Chr11g0071861 Lupinus albus HOM05D005460 ORTHO05D008059 1.5e-52 209.9 161 61.5
PGSC0003DMG400024525 Solanum tuberosum HOM05D005460 ORTHO05D008059 1.5e-52 209.9 163 61.3
Peaxi162Scf00017g03272 Petunia axillaris HOM05D005460 ORTHO05D008059 2.5e-52 209.1 163 61.3
Migut.I00363 Erythranthe guttata HOM05D005460 ORTHO05D008059 7.3e-52 207.6 161 64.0
TPR.G14357 Trifolium pratense HOM05D005460 ORTHO05D008059 7.3e-52 207.6 161 60.2
Psat1g126760 Pisum sativum HOM05D005460 ORTHO05D008059 3.6e-51 205.3 161 59.6
HPP92_007735 Vanilla planifolia HOM05D005460 ORTHO05D008059 4.8e-51 204.9 162 61.1
RcHm_v2.0_Chr7g0183711 Rosa chinensis HOM05D005460 ORTHO05D008059 8.1e-51 204.1 162 59.3
Medtr2g461560 Medicago truncatula HOM05D005460 ORTHO05D008059 1.8e-50 203.0 161 59.6
Nitab4.5_0005994g0060 Nicotiana tabacum HOM05D005460 ORTHO05D008059 1.8e-50 203.0 161 60.9
Aa31LG3G18430 Aethionema arabicum HOM05D005460 ORTHO05D008059 2.4e-50 202.6 151 63.6
FvH4_5g13410 Fragaria vesca HOM05D005460 ORTHO05D008059 2.4e-50 202.6 149 63.8
Nitab4.5_0002467g0140 Nicotiana tabacum HOM05D005460 ORTHO05D008059 2.4e-50 202.6 161 60.2
Potri.012G063500 Populus trichocarpa HOM05D005460 ORTHO05D008059 3.1e-50 202.2 97 99.0
FAN08G0483 Fragaria x ananassa HOM05D005460 ORTHO05D008059 4.0e-50 201.8 149 63.8
THA.LOC104818356 Tarenaya hassleriana HOM05D005460 ORTHO05D008059 6.9e-50 201.1 151 64.2
CANSAT80G0202 Cannabis sativa HOM05D005460 ORTHO05D008059 9.0e-50 200.7 161 60.2
SGA_v2.0_scaffold25G10948 Striga asiatica HOM05D005460 ORTHO05D008059 1.5e-49 199.9 170 57.1
Prupe.5G209800 Prunus persica HOM05D005460 ORTHO05D008059 2.6e-49 199.1 148 62.8
SEGI_08899 Sequoiadendron giganteum HOM05D005460 ORTHO05D008059 3.4e-49 198.7 150 62.0
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala HOM05D005460 ORTHO05D008059 4.4e-49 198.4 163 59.5
Zm00001eb327130 Zea mays HOM05D005460 ORTHO05D008059 5.8e-49 198.0 164 55.5
CARHR205080 Cardamine hirsuta HOM05D005460 ORTHO05D008059 2.2e-48 196.1 151 61.6
Sp6g34850 Schrenkiella parvula HOM05D005460 ORTHO05D008059 3.2e-47 192.2 162 56.8
Thhalv10012480m.g Eutrema salsugineum HOM05D005460 ORTHO05D008059 1.2e-46 190.3 162 57.4
FAN18G2313 Fragaria x ananassa HOM05D005460 ORTHO05D008059 6.0e-46 188.0 168 55.4
Pp3c5_22230 Physcomitrium patens HOM05D005460 ORTHO05D008059 6.0e-46 188.0 150 56.7
A10p28560 Brassica napus HOM05D005460 ORTHO05D008059 6.6e-45 184.5 162 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis HOM05D005460 ORTHO05D008059 1.1e-44 183.7 150 55.3
AT5G08110 Arabidopsis thaliana HOM05D005460 ORTHO05D008059 1.1e-44 183.7 147 58.5
C09p68840 Brassica napus HOM05D005460 ORTHO05D008059 1.1e-44 183.7 162 56.2
BolC9t59631H Brassica oleracea HOM05D005460 ORTHO05D008059 1.1e-44 183.7 162 56.2
AL6G18480 Arabidopsis lyrata HOM05D005460 ORTHO05D008059 2.5e-44 182.6 148 57.4
Carub.0006s0699 Capsella rubella HOM05D005460 ORTHO05D008059 2.5e-44 182.6 151 56.3
BraA10t44905Z Brassica rapa HOM05D005460 ORTHO05D008059 7.3e-44 181.0 162 55.6
FAN13G2142 Fragaria x ananassa HOM05D005460 ORTHO05D008059 2.1e-43 179.5 135 62.2
BcaB08g37287 Brassica carinata HOM05D005460 ORTHO05D008059 1.4e-42 176.8 162 53.7
MD14G1216300 Malus domestica HOM05D005460 ORTHO05D008059 4.0e-42 175.3 161 51.6
SMO203G0199 Selaginella moellendorffii HOM05D005460 ORTHO05D008059 7.6e-41 171.0 150 51.3
Os02g0111900 Oryza sativa ssp. japonica HOM05D005460 ORTHO05D008059 1.3e-37 160.2 165 44.8
Haze_18509 Corylus avellana HOM05D005460 ORTHO05D008059 2.3e-37 159.5 150 55.3
ATR0827G052 Amborella trichopoda HOM05D005460 ORTHO05D008059 2.5e-36 156.0 110 66.4
CBR_g50975 Chara braunii HOM05D005460 ORTHO05D008059 4.3e-36 155.2 151 48.3
Prupe.5G209300 Prunus persica HOM05D005460 ORTHO05D008059 6.2e-35 151.4 186 46.2
vmacro17637 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 2.2e-32 142.9 97 71.1
vmacro23112 Vaccinium macrocarpon HOM05D005460 ORTHO05D008059 4.2e-31 138.7 96 70.8
Cpa.g.sc3.237 Carica papaya HOM05D005460 ORTHO05D008059 1.8e-29 133.3 164 50.0
PGR031G2062 Punica granatum HOM05D005460 ORTHO05D008059 7.4e-28 127.9 81 74.1
Ca_02785_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 1.6e-27 126.7 82 69.5
Lj9A438G54 Lonicera japonica HOM05D005460 ORTHO05D008059 2.8e-27 125.9 161 44.7
MCO09G659 Micromonas commoda HOM05D005460 ORTHO05D008059 3.8e-24 115.5 157 35.7
Cre03.g187700 Chlamydomonas reinhardtii HOM05D005460 ORTHO05D008059 2.3e-21 106.3 163 33.7
Hma1.2p1_3034F.1_g331890 Hydrangea macrophylla HOM05D005460 ORTHO05D008059 9.0e-18 94.4 67 67.2
Cfa022214 Carpinus fangiana HOM05D005460 ORTHO05D124255 3.8e-16 89.0 151 29.1
Ca_02784_v3 Cicer arietinum L. HOM05D005460 ORTHO05D008059 1.4e-13 80.5 68 54.4
PRCOL_00000536 Prasinoderma coloniale HOM05D005460 ORTHO05D008059 6.3e-11 71.6 194 28.9


User provided reference genes

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