Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.003G078601 Populus trichocarpa HOM05D005550 ORTHO05D006679 1.8e-42 175.6 97 100.0
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 2.1e-19 99.0 56 83.9
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 4.8e-19 97.8 56 82.1
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 4.8e-19 97.8 56 82.1
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 6.2e-19 97.4 56 80.4
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 8.2e-19 97.1 56 82.1
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 1.1e-18 96.7 56 76.8
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 1.1e-18 96.7 56 80.4
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 1.1e-18 96.7 56 76.8
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 1.8e-18 95.9 56 80.4
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 1.8e-18 95.9 56 82.1
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 2.4e-18 95.5 53 84.9
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 2.4e-18 95.5 55 83.6
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 3.1e-18 95.1 55 78.2
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 3.1e-18 95.1 56 82.1
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 4.0e-18 94.7 53 81.1
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 5.3e-18 94.4 53 84.9
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 5.3e-18 94.4 56 80.4
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 5.3e-18 94.4 56 80.4
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 5.3e-18 94.4 56 80.4
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 6.9e-18 94.0 56 78.6
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 6.9e-18 94.0 54 85.2
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 6.9e-18 94.0 54 85.2
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 6.9e-18 94.0 56 78.6
MD04G1062200 Malus domestica HOM05D005550 ORTHO05D006679 6.9e-18 94.0 56 78.6
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 6.9e-18 94.0 56 80.4
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 6.9e-18 94.0 53 84.9
DCAR_006840 Daucus carota HOM05D005550 ORTHO05D006679 9.0e-18 93.6 55 80.0
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 9.0e-18 93.6 52 86.5
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 9.0e-18 93.6 56 78.6
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 9.0e-18 93.6 52 86.5
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 1.2e-17 93.2 57 77.2
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 1.2e-17 93.2 56 78.6
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 1.2e-17 93.2 56 78.6
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 1.2e-17 93.2 57 78.9
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 1.2e-17 93.2 53 83.0
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 1.5e-17 92.8 53 83.0
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 1.5e-17 92.8 56 78.6
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 2.0e-17 92.4 56 78.6
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 2.0e-17 92.4 56 78.6
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 2.0e-17 92.4 56 78.6
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 2.0e-17 92.4 56 76.8
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 2.0e-17 92.4 53 81.1
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 2.0e-17 92.4 52 82.7
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 2.6e-17 92.0 53 81.1
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 2.6e-17 92.0 56 76.8
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 2.6e-17 92.0 56 78.6
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 3.4e-17 91.7 53 79.2
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 3.4e-17 91.7 53 81.1
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 3.4e-17 91.7 53 77.4
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 3.4e-17 91.7 56 75.0
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 3.4e-17 91.7 53 81.1
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 3.4e-17 91.7 56 76.8
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 4.5e-17 91.3 56 76.8
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 7.6e-17 90.5 53 81.1
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 7.6e-17 90.5 53 75.5
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 1.0e-16 90.1 56 75.0
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 1.0e-16 90.1 53 75.5
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 1.0e-16 90.1 53 73.6
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 1.3e-16 89.7 53 79.2
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 1.3e-16 89.7 53 77.4
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 1.7e-16 89.4 53 73.6
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 1.7e-16 89.4 56 75.0
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 2.9e-16 88.6 53 79.2
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 2.9e-16 88.6 53 77.4
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 6.5e-16 87.4 53 77.4
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 6.5e-16 87.4 56 75.0
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 1.4e-15 86.3 56 67.9
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 1.4e-15 86.3 56 67.9
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 4.2e-15 84.7 56 67.9
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 9.3e-15 83.6 56 71.4
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 1.2e-14 83.2 56 71.4
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 1.2e-14 83.2 56 71.4
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 1.2e-14 83.2 56 71.4
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 1.2e-14 83.2 56 71.4
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 1.2e-14 83.2 56 71.4
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 1.6e-14 82.8 53 69.8
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 2.7e-14 82.0 56 69.6
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 4.6e-14 81.3 53 73.6
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 7.9e-14 80.5 56 69.6
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 1.0e-13 80.1 53 69.8
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 8.7e-13 77.0 56 62.5
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 4.3e-12 74.7 88 51.1
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 2.8e-11 72.0 39 87.2
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 2.8e-11 72.0 42 81.0
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 4.8e-11 71.2 39 84.6
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 1.1e-10 70.1 49 73.5
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 6.9e-10 67.4 38 86.8
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 1.2e-09 66.6 85 45.9
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 1.5e-09 66.2 38 84.2
MBI15_g30439_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D011024 2.6e-09 65.5 38 81.6
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 1.7e-08 62.8 39 74.4
CDE04G2441 Ceratophyllum demersum HOM05D005550 ORTHO05D006679 2.2e-08 62.4 41 70.7
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 1.1e-07 60.1 56 48.2
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 5.5e-07 57.8 56 46.4
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 9.3e-07 57.0 69 40.6
MBI06_g10737_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D011024 1.6e-06 56.2 38 71.1
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 3.6e-06 55.1 56 41.1


User provided reference genes

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