Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1765 Papaver somniferum HOM05D003934 ORTHO05D005108 6.1e-247 857.1 443 100.0
PSO063G5737 Papaver somniferum HOM05D003934 ORTHO05D005108 1.5e-155 553.5 526 60.8
PSO170G4033 Papaver somniferum HOM05D003934 ORTHO05D005108 6.1e-154 548.1 526 60.1
Nn3g19008 Nelumbo nucifera HOM05D003934 ORTHO05D005108 4.1e-142 508.8 523 55.6
Actinidia08639 Actinidia chinensis HOM05D003934 ORTHO05D005108 8.6e-140 501.1 523 55.8
Actinidia34211 Actinidia chinensis HOM05D003934 ORTHO05D005108 8.6e-140 501.1 523 55.4
TAR375G0202 Trochodendron aralioides HOM05D003934 ORTHO05D005108 2.1e-138 496.5 523 54.1
Hma1.2p1_1188F.1_g265250 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 2.8e-138 496.1 523 54.1
arahy.Tifrunner.gnm1.ann1.WX46MS Arachis hypogaea HOM05D003934 ORTHO05D005108 3.0e-137 492.7 523 53.7
arahy.Tifrunner.gnm1.ann1.W6P66N Arachis hypogaea HOM05D003934 ORTHO05D005108 2.0e-136 490.0 523 53.5
QL09p009520 Quercus lobata HOM05D003934 ORTHO05D005108 4.4e-136 488.8 524 53.8
CiPaw.05G251900 Carya illinoinensis HOM05D003934 ORTHO05D005108 9.8e-136 487.6 524 54.0
GSVIVG01038711001 Vitis vinifera HOM05D003934 ORTHO05D005108 9.8e-136 487.6 523 53.3
RcHm_v2.0_Chr1g0331941 Rosa chinensis HOM05D003934 ORTHO05D005108 3.7e-135 485.7 523 54.1
Thecc.03G196100 Theobroma cacao HOM05D003934 ORTHO05D005108 4.9e-135 485.3 523 53.7
CSS0014973 Camellia sinensis var. sinensis HOM05D003934 ORTHO05D005108 6.3e-135 485.0 523 53.7
CDE10G0188 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 6.3e-135 485.0 523 52.6
Lsat_1_v5_gn_9_58300 Lactuca sativa HOM05D003934 ORTHO05D005108 6.3e-135 485.0 518 52.9
Hund11672 Selenicereus undatus HOM05D003934 ORTHO05D005108 1.8e-134 483.4 520 53.5
Psat5g078160 Pisum sativum HOM05D003934 ORTHO05D005108 2.4e-134 483.0 527 53.7
Lalb_Chr08g0240341 Lupinus albus HOM05D003934 ORTHO05D005108 3.2e-134 482.6 524 53.8
Potri.015G017200 Populus trichocarpa HOM05D003934 ORTHO05D005108 3.2e-134 482.6 523 52.8
Duzib205G1942 Durio zibethinus HOM05D003934 ORTHO05D005108 4.1e-134 482.3 523 52.6
Medtr3g091250 Medicago truncatula HOM05D003934 ORTHO05D005108 5.4e-134 481.9 522 53.4
HPP92_021551 Vanilla planifolia HOM05D003934 ORTHO05D005108 5.4e-134 481.9 521 53.2
MD07G1290300 Malus domestica HOM05D003934 ORTHO05D005108 1.2e-133 480.7 523 53.7
PGR042G0302 Punica granatum HOM05D003934 ORTHO05D005108 1.2e-133 480.7 523 53.2
MD01G1219700 Malus domestica HOM05D003934 ORTHO05D005108 2.0e-133 479.9 523 53.5
Eucgr.A01467 Eucalyptus grandis HOM05D003934 ORTHO05D005108 2.7e-133 479.6 522 52.9
Prupe.2G311500 Prunus persica HOM05D003934 ORTHO05D005108 3.5e-133 479.2 525 53.0
Phvul.009G053700 Phaseolus vulgaris HOM05D003934 ORTHO05D005108 4.5e-133 478.8 523 52.4
FAN01G0480 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.0e-132 477.6 523 52.8
FAN06G1603 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.0e-132 477.6 523 52.8
MSTRG.8665 Avicennia marina HOM05D003934 ORTHO05D005108 1.3e-132 477.2 521 52.4
CAN.G108.66 Capsicum annuum HOM05D003934 ORTHO05D005108 1.3e-132 477.2 523 52.8
Duzib068G1159 Durio zibethinus HOM05D003934 ORTHO05D005108 1.3e-132 477.2 523 52.8
FAN03G1965 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.3e-132 477.2 523 52.8
Sabra15G0013200 Salix brachista HOM05D003934 ORTHO05D005108 1.3e-132 477.2 523 53.0
Lj1C1015T5 Lonicera japonica HOM05D003934 ORTHO05D005108 1.7e-132 476.9 520 52.9
Manes.06G159600 Manihot esculenta HOM05D003934 ORTHO05D005108 1.7e-132 476.9 523 52.8
HPP92_021541 Vanilla planifolia HOM05D003934 ORTHO05D005108 1.7e-132 476.9 521 53.0
Nitab4.5_0000714g0110 Nicotiana tabacum HOM05D003934 ORTHO05D005108 3.9e-132 475.7 524 51.3
Ciclev10004777m.g Citrus clementina HOM05D003934 ORTHO05D005108 5.0e-132 475.3 524 52.9
CsaV3_3G027880 Cucumis sativus L. HOM05D003934 ORTHO05D005108 6.6e-132 474.9 522 52.7
Lj1g0022752 Lotus japonicus HOM05D003934 ORTHO05D005108 1.5e-131 473.8 523 52.8
COL.COLO4_11261 Corchorus olitorius HOM05D003934 ORTHO05D005108 2.5e-131 473.0 523 52.4
SGA_v2.0_scaffold44G16789 Striga asiatica HOM05D003934 ORTHO05D005108 2.5e-131 473.0 523 52.2
Sopen03g023200 Solanum pennellii HOM05D003934 ORTHO05D005108 4.3e-131 472.2 523 52.0
ECA232G2652 Erigeron canadensis HOM05D003934 ORTHO05D005108 5.6e-131 471.9 530 51.5
Glyma.06G127500 Glycine max HOM05D003934 ORTHO05D005108 5.6e-131 471.9 523 52.0
PGSC0003DMG400009079 Solanum tuberosum HOM05D003934 ORTHO05D005108 7.3e-131 471.5 523 51.6
Gohir.A11G232300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 9.5e-131 471.1 523 52.6
Solyc03g083430.3 Solanum lycopersicum HOM05D003934 ORTHO05D005108 1.2e-130 470.7 523 51.8
Gorai.006G201100 Gossypium raimondii HOM05D003934 ORTHO05D005108 1.6e-130 470.3 523 52.2
CANSAT11G0158 Cannabis sativa HOM05D003934 ORTHO05D005108 2.1e-130 469.9 519 51.8
FAN10G3094 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.1e-130 469.9 464 57.5
Potri.012G012800 Populus trichocarpa HOM05D003934 ORTHO05D005108 2.8e-130 469.5 523 52.6
Sed0008190 Sechium edule HOM05D003934 ORTHO05D005108 4.7e-130 468.8 522 51.7
Glyma.04G236800 Glycine max HOM05D003934 ORTHO05D005108 6.1e-130 468.4 523 52.0
Gohir.D09G179100 Gossypium hirsutum HOM05D003934 ORTHO05D005108 6.1e-130 468.4 523 52.0
Gohir.D11G243500 Gossypium hirsutum HOM05D003934 ORTHO05D005108 1.0e-129 467.6 523 52.0
Gohir.A09G184300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 2.3e-129 466.5 524 52.1
Aa31LG11G7140 Aethionema arabicum HOM05D003934 ORTHO05D005108 6.8e-129 464.9 523 52.6
Ca_16696_v3 Cicer arietinum L. HOM05D003934 ORTHO05D005108 3.4e-128 462.6 539 51.4
Migut.F00226 Erythranthe guttata HOM05D003934 ORTHO05D005108 5.8e-128 461.8 523 51.1
ATR0602G008 Amborella trichopoda HOM05D003934 ORTHO05D005108 7.5e-128 461.5 523 50.7
Cc02_g01680 Coffea canephora HOM05D003934 ORTHO05D005108 7.5e-128 461.5 523 51.1
vmacro06541 Vaccinium macrocarpon HOM05D003934 ORTHO05D005108 2.2e-127 459.9 456 56.6
EL10Ac3g05301 Beta vulgaris HOM05D003934 ORTHO05D005108 2.9e-127 459.5 524 51.5
THA.LOC104820263 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 3.2e-126 456.1 524 51.9
THA.LOC104816810 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 4.1e-126 455.7 523 51.1
AL6G16130 Arabidopsis lyrata HOM05D003934 ORTHO05D005108 7.0e-126 454.9 523 52.0
CDE10G0405 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 2.0e-125 453.4 520 50.8
AUR62006111 Chenopodium quinoa HOM05D003934 ORTHO05D005108 3.5e-125 452.6 529 50.3
FvH4_7g06390 Fragaria vesca HOM05D003934 ORTHO05D005108 4.6e-125 452.2 519 51.4
Sp6g36730 Schrenkiella parvula HOM05D003934 ORTHO05D005108 7.8e-125 451.4 523 50.7
Thhalv10013305m.g Eutrema salsugineum HOM05D003934 ORTHO05D005108 3.9e-124 449.1 522 50.8
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 5.0e-124 448.7 497 52.5
AT5G06160 Arabidopsis thaliana HOM05D003934 ORTHO05D005108 8.6e-124 448.0 519 51.4
Carub.0006s0504 Capsella rubella HOM05D003934 ORTHO05D005108 8.6e-124 448.0 523 50.7
Oeu041045.2 Olea europaea HOM05D003934 ORTHO05D005108 2.8e-122 443.0 567 47.8
Ah.07g205840 Amaranthus hybridus HOM05D003934 ORTHO05D005108 6.2e-122 441.8 470 53.4
Nitab4.5_0007081g0020 Nicotiana tabacum HOM05D003934 ORTHO05D005108 1.8e-121 440.3 453 53.9
Cfa016252 Carpinus fangiana HOM05D003934 ORTHO05D005108 3.1e-121 439.5 452 54.6
AUR62019377 Chenopodium quinoa HOM05D003934 ORTHO05D005108 4.0e-121 439.1 587 45.8
Haze_00188 Corylus avellana HOM05D003934 ORTHO05D005108 2.2e-119 433.3 501 52.9
CARHR206870 Cardamine hirsuta HOM05D003934 ORTHO05D005108 3.7e-119 432.6 525 49.0
Mapoly0116s0041 Marchantia polymorpha HOM05D003934 ORTHO05D005108 4.9e-119 432.2 524 48.7
FAN24G3520 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.4e-118 430.6 530 50.2
BraA02t04872Z Brassica rapa HOM05D003934 ORTHO05D005108 1.3e-116 424.1 521 48.8
BolC2t06227H Brassica oleracea HOM05D003934 ORTHO05D005108 2.3e-116 423.3 521 48.8
ClCG05G008860 Citrullus lanatus HOM05D003934 ORTHO05D005108 3.0e-116 422.9 451 52.5
HanXRQChr09g0252981 Helianthus annuus HOM05D003934 ORTHO05D005108 3.0e-116 422.9 476 51.7
C02p02610 Brassica napus HOM05D003934 ORTHO05D005108 9.5e-115 417.9 522 49.2
C03p02940 Brassica napus HOM05D003934 ORTHO05D005108 6.2e-114 415.2 523 47.6
BcaB01g05979 Brassica carinata HOM05D003934 ORTHO05D005108 1.8e-113 413.7 523 47.2
Os03g0717600 Oryza sativa ssp. japonica HOM05D003934 ORTHO05D005108 6.8e-113 411.8 524 46.9
BolC3t12849H Brassica oleracea HOM05D003934 ORTHO05D005108 3.4e-112 409.5 527 47.2
SMO119G0296 Selaginella moellendorffii HOM05D003934 ORTHO05D005108 4.4e-112 409.1 519 46.1
Cpa.g.sc3.69 Carica papaya HOM05D003934 ORTHO05D005108 2.2e-111 406.8 454 52.4
Oeu041318.2 Olea europaea HOM05D003934 ORTHO05D005108 3.7e-111 406.0 452 53.3
A03p02600 Brassica napus HOM05D003934 ORTHO05D005108 1.1e-110 404.4 525 46.3
Pp3c5_21100 Physcomitrium patens HOM05D003934 ORTHO05D005108 1.4e-110 404.1 527 46.7
TWI14G0523 Tripterygium wilfordii HOM05D003934 ORTHO05D005108 9.2e-110 401.4 523 46.7
BraA03t09621Z Brassica rapa HOM05D003934 ORTHO05D005108 1.2e-109 401.0 525 46.3
SalBow4G2493 Salvia bowleyana HOM05D003934 ORTHO05D005108 1.3e-108 397.5 452 49.6
Peaxi162Scf00550g00530 Petunia axillaris HOM05D003934 ORTHO05D005108 2.3e-108 396.7 524 46.6
SalBow4G2054 Salvia bowleyana HOM05D003934 ORTHO05D005108 3.9e-108 396.0 452 49.8
FAN26G2519 Fragaria x ananassa HOM05D003934 ORTHO05D005108 8.9e-105 384.8 509 46.6
FAN19G2010 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.6e-104 383.3 499 47.7
FvH4_1g22860 Fragaria vesca HOM05D003934 ORTHO05D005108 4.4e-104 382.5 513 46.8
FAN23G2330 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.8e-104 382.1 509 46.4
HanXRQChr09g0252971 Helianthus annuus HOM05D003934 ORTHO05D005108 1.3e-92 344.4 552 41.5
Sabra12G0018300 Salix brachista HOM05D003934 ORTHO05D005108 5.1e-92 342.4 526 43.9
Cre06.g297750 Chlamydomonas reinhardtii HOM05D003934 ORTHO05D005108 1.3e-90 337.8 562 38.8
BcaB05g21680 Brassica carinata HOM05D003934 ORTHO05D005108 2.4e-89 333.6 795 33.5
MBI07_g07099_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 1.3e-87 327.8 322 57.1
FvH4_5g28470 Fragaria vesca HOM05D003934 ORTHO05D005108 2.9e-87 326.6 438 46.6
Zm00001eb156600 Zea mays HOM05D003934 ORTHO05D005108 3.5e-85 319.7 324 57.1
FAN18G2200 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.3e-82 311.2 422 45.5
CBR_g4095 Chara braunii HOM05D003934 ORTHO05D005108 4.8e-82 309.3 452 42.3
Aqoxy1G00997 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 3.3e-75 286.6 441 40.8
MCO08G102 Micromonas commoda HOM05D003934 ORTHO05D005108 1.1e-73 281.6 517 36.8
FAN27G0411 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.8e-72 275.8 425 44.5
Gorai.007G258600 Gossypium raimondii HOM05D003934 ORTHO05D005108 1.9e-70 270.8 378 46.3
FAN28G1126 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.5e-70 269.2 462 39.2
DCAR_026768 Daucus carota HOM05D003934 ORTHO05D005108 1.0e-68 265.0 201 65.2
AUR62034796 Chenopodium quinoa HOM05D003934 ORTHO05D005108 6.7e-68 262.3 318 47.2
AUR62019431 Chenopodium quinoa HOM05D003934 ORTHO05D005108 4.3e-67 259.6 316 46.8
AUR62031013 Chenopodium quinoa HOM05D003934 ORTHO05D005108 3.7e-66 256.5 322 49.7
FvH4_7g05370 Fragaria vesca HOM05D003934 ORTHO05D005108 1.5e-64 251.1 543 38.1
Aqoxy1G00994 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.2e-63 247.3 406 39.4
Sc25g0000870 Simmondsia chinensis HOM05D003934 ORTHO05D005108 1.4e-62 244.6 377 43.5
DCAR_009017 Daucus carota HOM05D003934 ORTHO05D005108 5.5e-62 242.7 184 65.8
PRCOL_00004948 Prasinoderma coloniale HOM05D003934 ORTHO05D005108 2.7e-61 240.4 526 34.4
ATR0602G148 Amborella trichopoda HOM05D003934 ORTHO05D005108 6.1e-61 239.2 186 65.1
FvH4_2g12040 Fragaria vesca HOM05D003934 ORTHO05D005108 6.1e-61 239.2 374 43.9
TPR.G17291 Trifolium pratense HOM05D003934 ORTHO05D005108 6.9e-57 225.7 299 48.2
SEGI_10674 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 6.5e-55 219.2 140 71.4
FAN01G0659 Fragaria x ananassa HOM05D003934 ORTHO05D005108 9.4e-54 215.3 482 37.3
AUR62007347 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.8e-52 211.1 298 45.0
Haze_26996 Corylus avellana HOM05D003934 ORTHO05D005108 1.8e-49 201.1 563 29.3
Prupe.2G260300 Prunus persica HOM05D003934 ORTHO05D005108 4.2e-46 189.9 427 37.7
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 1.6e-45 188.0 537 30.9
AagrBONN_evm.TU.Sc2ySwM_368.1804 Anthoceros agrestis HOM05D003934 ORTHO05D005108 4.4e-43 179.9 301 39.9
FAN10G2167 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.3e-39 168.3 474 34.4
MBI07_g07098_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 1.1e-38 165.2 135 63.0
Aqoxy2G03740 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.5e-38 164.9 123 62.6
FAN10G1096 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.7e-37 160.6 465 34.4
SEGI_10754 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 1.7e-31 141.4 134 55.2
BolC6t37330H Brassica oleracea HOM05D003934 ORTHO05D019879 4.0e-28 130.2 419 29.6
BcaC08g44628 Brassica carinata HOM05D003934 ORTHO05D019879 8.8e-28 129.0 419 29.6
C06p21480 Brassica napus HOM05D003934 ORTHO05D019879 8.8e-28 129.0 419 29.6
SEGI_13646 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 4.9e-26 123.2 100 61.0
AUR62031016 Chenopodium quinoa HOM05D003934 ORTHO05D005108 4.1e-25 120.2 115 53.9
BraA07t29851Z Brassica rapa HOM05D003934 ORTHO05D019879 1.3e-23 115.2 422 27.0
A07p21690 Brassica napus HOM05D003934 ORTHO05D019879 2.0e-16 91.3 213 31.9
BcaB02g07780 Brassica carinata HOM05D003934 ORTHO05D019879 5.9e-16 89.7 85 55.3
Aqoxy1G01000 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 3.0e-15 87.4 70 60.0
Hma1.2p1_1973F.1_g309600 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 1.1e-09 68.9 41 75.6
HanXRQChr09g0252591 Helianthus annuus HOM05D003934 ORTHO05D019879 7.0e-09 66.2 49 63.3
FAN07G2332 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.9e-07 60.5 118 39.8
SEGI_13482 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 5.0e-07 60.1 173 30.1
Sp5g08830 Schrenkiella parvula HOM05D003934 ORTHO05D005108 9.5e-06 55.8 234 27.8


User provided reference genes

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