Gene: TPR.G17291

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G17291
  • Transcript Identifier TPR.T17896
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG2 : 9441301-9444476 : positive

Gene Family Information

  • ID HOM05D003934
  • #Genes/#Species 177/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA17896.v2
  • id Tp57577_TGAC_v2_gene17291.v2
  • pacid 35973280
  • uniprot A0A2K3NDS7

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045694
IEA
GOA Databaseregulation of embryo sac egg cell differentiation
GO:0000398
ISO
PLAZA Homology (enrichment)mRNA splicing, via spliceosome HOM05D003934

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G06160
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D003934

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IEA
GOA Databasecytosol
GO:0005681
ISO
PLAZA Homology (enrichment)spliceosomal complex HOM05D003934

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021966 Splicing factor SF3a60 binding domain
IPR031774 SF3A3 domain
Mapman id Description
16.2.1.2.3.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A3