Gene: FAN10G2167
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN10G2167
- Transcript Identifier FAN10G2167.1
- Gene Type Coding gene
- Location Fvb7-1 : 4829289-4833153 : negative
Gene Family Information
- ID HOM05D003934
- #Genes/#Species 177/94
- Phylogenetic origin
- ID ORTHO05D005108
- #Genes/#Species 164/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb7-1-snap-gene-48.47.v1.0.a1
- pacid 50488241
Descriptions
- Description PF11931//PF12108//PF16837 - Domain of unknown function (DUF3449) (DUF3449) // Splicing factor SF3a60 binding domain (SF3a60_bindingd) // Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 (SF3A3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0045694 | ISO | PLAZA Integrative Orthology | regulation of embryo sac egg cell differentiation | AT5G06160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G06160 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005681 | IEA | InterPro | spliceosomal complex | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G06160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.2.3.3 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A3 |