Gene: Sed0008190

General Information

Structural Information

  • Species Sechium edule
  • Gene Identifier Sed0008190
  • Transcript Identifier Sed0008190.1
  • Gene Type Coding gene
  • Location LG13 : 464762-471466 : negative

Gene Family Information

  • ID HOM05D003934
  • #Genes/#Species 177/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sed0008190.1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0045694
ISO
PLAZA Integrative Orthologyregulation of embryo sac egg cell differentiation AT5G06160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G06160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G06160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031774 SF3A3 domain
IPR024598 Splicing factor SF3a60 subunit C-terminal
IPR021966 Splicing factor SF3a60 binding domain
Mapman id Description
16.2.1.2.3.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A3