Gene: Duzib205G1942

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib205G1942
  • Transcript Identifier Duzib205G1942.01
  • Gene Type Coding gene
  • Location NW_019168381.1 : 7921424-7926354 : positive

Gene Family Information

  • ID HOM05D003934
  • #Genes/#Species 177/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111289340
  • name XM_022880312.1
  • pid XP_022736047.1
  • id gene-LOC111289340
  • uniprot A0A6P5Y6I4

Descriptions

  • product splicing factor SF3a60 homolog
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0045694
ISO
PLAZA Integrative Orthologyregulation of embryo sac egg cell differentiation AT5G06160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G06160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G06160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021966 Splicing factor SF3a60 binding domain
IPR024598 Splicing factor SF3a60 subunit C-terminal
IPR031774 SF3A3 domain
Mapman id Description
16.2.1.2.3.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A3