Gene: Cre06.g297750

General Information

Structural Information

  • Species Chlamydomonas reinhardtii
  • Gene Identifier Cre06.g297750
  • Transcript Identifier Cre06.g297750.t1.2
  • Gene Type Coding gene
  • Location chromosome_6 : 7168148-7171506 : negative

Gene Family Information

  • ID HOM05D003934
  • #Genes/#Species 177/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Cre06.g297750.v5.5
  • pacid 30779151
  • alias g6887.t1
  • geneName SPL3
  • uniprot A8IP78

Descriptions

  • Description SF3A3 splicing factor 3a, subunit 3. The splicing factor 3a heterotrimer includes subunits 1, 2 and 3 and is necessary for the in vitro conversion of 15S U2 snRNP into an active 17S particle that performs pre-mRNA splicing. Subunit 2 interacts with subun
  • Description SF3A3 splicing factor 3a, subunit 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0045694
ISO
PLAZA Integrative Orthologyregulation of embryo sac egg cell differentiation AT5G06160

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G06160

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G06160

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024598 Splicing factor SF3a60 subunit C-terminal
IPR031774 SF3A3 domain
IPR031776 Splicing factor 3A subunit 3
IPR021966 Splicing factor SF3a60 binding domain
Mapman id Description
16.2.1.2.3.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.component SF3A3