Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1233 Papaver somniferum HOM05D004842 ORTHO05D005929 5.5e-239 830.9 514 100.0
PSO478G2485 Papaver somniferum HOM05D004842 ORTHO05D005929 7.1e-239 830.5 514 99.8
Nn1g01353 Nelumbo nucifera HOM05D004842 ORTHO05D005929 2.4e-226 788.9 514 93.4
TAR374G0778 Trochodendron aralioides HOM05D004842 ORTHO05D005929 5.3e-226 787.7 514 92.0
CDE03G0432 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 1.0e-224 783.5 514 92.2
Dinv33198 Davidia involucrata HOM05D004842 ORTHO05D005929 1.7e-224 782.7 514 91.4
Aqoxy7G00451 Aquilegia oxysepala HOM05D004842 ORTHO05D005929 2.9e-224 781.9 512 92.6
CDE04G2825 Ceratophyllum demersum HOM05D004842 ORTHO05D005929 3.8e-224 781.6 514 92.2
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 3.8e-224 781.6 514 86.8
CSS0028462 Camellia sinensis var. sinensis HOM05D004842 ORTHO05D005929 9.4e-223 776.9 514 90.5
Lj9C410G7 Lonicera japonica HOM05D004842 ORTHO05D005929 2.7e-222 775.4 514 91.8
GSVIVG01007685001 Vitis vinifera HOM05D004842 ORTHO05D005929 3.6e-222 775.0 513 91.2
Actinidia01552 Actinidia chinensis HOM05D004842 ORTHO05D005929 2.0e-220 769.2 514 90.1
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.2e-219 765.8 514 89.9
Cc10_g16460 Coffea canephora HOM05D004842 ORTHO05D005929 3.7e-219 765.0 513 89.9
ATR0757G167 Amborella trichopoda HOM05D004842 ORTHO05D005929 1.1e-218 763.5 514 91.4
DCAR_005757 Daucus carota HOM05D004842 ORTHO05D005929 1.1e-218 763.5 514 90.3
CANSAT25G2510 Cannabis sativa HOM05D004842 ORTHO05D005929 2.4e-218 762.3 514 88.5
Cpa.g.sc20.22 Carica papaya HOM05D004842 ORTHO05D005929 3.5e-217 758.4 512 88.5
Ca_21945_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 3.5e-217 758.4 514 89.3
Lsat_1_v5_gn_0_10701 Lactuca sativa HOM05D004842 ORTHO05D005929 3.5e-217 758.4 514 89.5
Cfa008117 Carpinus fangiana HOM05D004842 ORTHO05D005929 4.5e-217 758.1 514 88.9
Phvul.002G251300 Phaseolus vulgaris HOM05D004842 ORTHO05D005929 4.5e-217 758.1 514 89.5
Glyma.08G128700 Glycine max HOM05D004842 ORTHO05D005929 1.3e-216 756.5 514 89.5
HanXRQChr04g0123031 Helianthus annuus HOM05D004842 ORTHO05D005929 1.7e-216 756.1 514 87.5
PGSC0003DMG400005186 Solanum tuberosum HOM05D004842 ORTHO05D005929 2.9e-216 755.4 513 87.3
CsaV3_2G033060 Cucumis sativus L. HOM05D004842 ORTHO05D005929 3.8e-216 755.0 514 83.9
ECA232G0634 Erigeron canadensis HOM05D004842 ORTHO05D005929 3.8e-216 755.0 514 87.7
Atru.chr13.2273 Acer truncatum HOM05D004842 ORTHO05D005929 5.0e-216 754.6 512 89.8
MSTRG.1576 Avicennia marina HOM05D004842 ORTHO05D005929 6.5e-216 754.2 513 87.9
CiPaw.03G017600 Carya illinoinensis HOM05D004842 ORTHO05D005929 6.5e-216 754.2 514 89.3
Sopen06g023340 Solanum pennellii HOM05D004842 ORTHO05D005929 1.1e-215 753.4 513 87.1
Lj6g0012354 Lotus japonicus HOM05D004842 ORTHO05D005929 1.9e-215 752.7 514 88.9
Solyc06g064830.3 Solanum lycopersicum HOM05D004842 ORTHO05D005929 3.2e-215 751.9 513 86.9
HanXRQChr15g0492161 Helianthus annuus HOM05D004842 ORTHO05D005929 4.2e-215 751.5 514 86.8
AUR62006879 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.6e-214 749.6 514 82.7
Gohir.D13G122000 Gossypium hirsutum HOM05D004842 ORTHO05D005929 6.1e-214 747.7 510 88.4
Gorai.013G136700 Gossypium raimondii HOM05D004842 ORTHO05D005929 6.1e-214 747.7 510 88.8
Psat5g178560 Pisum sativum HOM05D004842 ORTHO05D005929 6.1e-214 747.7 514 87.9
Eucgr.E01768 Eucalyptus grandis HOM05D004842 ORTHO05D005929 8.0e-214 747.3 511 89.4
Hund07225 Selenicereus undatus HOM05D004842 ORTHO05D005929 8.0e-214 747.3 514 88.1
Potri.011G156900 Populus trichocarpa HOM05D004842 ORTHO05D005929 1.4e-213 746.5 511 87.7
MSTRG.25488 Avicennia marina HOM05D004842 ORTHO05D005929 1.8e-213 746.1 513 88.5
Duzib177G0537 Durio zibethinus HOM05D004842 ORTHO05D005929 1.8e-213 746.1 510 84.5
Migut.C01340 Erythranthe guttata HOM05D004842 ORTHO05D005929 1.8e-213 746.1 513 88.5
Gohir.A13G118200 Gossypium hirsutum HOM05D004842 ORTHO05D005929 1.8e-213 746.1 510 85.3
Lalb_Chr11g0075451 Lupinus albus HOM05D004842 ORTHO05D005929 1.8e-213 746.1 513 88.7
MD08G1215900 Malus domestica HOM05D004842 ORTHO05D005929 1.8e-213 746.1 514 86.8
Thecc.08G195800 Theobroma cacao HOM05D004842 ORTHO05D005929 1.8e-213 746.1 510 84.7
Os01g0322800 Oryza sativa ssp. japonica HOM05D004842 ORTHO05D005929 2.3e-213 745.7 513 86.5
Medtr3g052220 Medicago truncatula HOM05D004842 ORTHO05D005929 3.0e-213 745.3 514 86.8
Sabra11G0143100 Salix brachista HOM05D004842 ORTHO05D005929 3.0e-213 745.3 511 87.7
Prupe.1G547900 Prunus persica HOM05D004842 ORTHO05D005929 5.2e-213 744.6 514 87.7
TWI14G0987 Tripterygium wilfordii HOM05D004842 ORTHO05D005929 5.2e-213 744.6 512 88.1
PGR031G3502 Punica granatum HOM05D004842 ORTHO05D005929 1.5e-212 743.0 511 83.8
Aa31LG7G3010 Aethionema arabicum HOM05D004842 ORTHO05D005929 2.6e-212 742.3 511 88.3
SalBow8G3404 Salvia bowleyana HOM05D004842 ORTHO05D005929 2.6e-212 742.3 536 84.9
Sed0014706 Sechium edule HOM05D004842 ORTHO05D005929 2.6e-212 742.3 514 83.5
VMungo0251G2201 Vigna mungo HOM05D004842 ORTHO05D005929 9.7e-212 740.3 504 89.1
THA.LOC104813908 Tarenaya hassleriana HOM05D004842 ORTHO05D005929 1.3e-211 740.0 512 88.3
Mapoly0044s0021 Marchantia polymorpha HOM05D004842 ORTHO05D005929 2.2e-211 739.2 514 86.8
Nitab4.5_0006477g0030 Nicotiana tabacum HOM05D004842 ORTHO05D005929 2.2e-211 739.2 504 87.9
ClCG11G008790 Citrullus lanatus HOM05D004842 ORTHO05D005929 2.8e-211 738.8 509 82.5
Ciclev10010841m.g Citrus clementina HOM05D004842 ORTHO05D005929 2.8e-211 738.8 512 90.0
MD15G1400300 Malus domestica HOM05D004842 ORTHO05D005929 3.7e-211 738.4 514 89.1
Glyma.05G170500 Glycine max HOM05D004842 ORTHO05D005929 6.3e-211 737.6 514 88.7
MBI04_g37683_MAGBIO Magnolia biondii HOM05D004842 ORTHO05D005929 1.8e-210 736.1 507 88.8
Thhalv10018372m.g Eutrema salsugineum HOM05D004842 ORTHO05D005929 2.6e-209 732.3 511 85.1
SGA_v2.0_scaffold118G32576 Striga asiatica HOM05D004842 ORTHO05D005929 1.0e-208 730.3 504 88.1
Sp5g28910 Schrenkiella parvula HOM05D004842 ORTHO05D005929 2.2e-208 729.2 511 81.4
Rhsim12G0003800 Rhododendron simsii HOM05D004842 ORTHO05D005929 2.9e-208 728.8 504 85.3
SGA_v2.0_scaffold24G10617 Striga asiatica HOM05D004842 ORTHO05D005929 8.5e-208 727.2 527 75.7
COL.COLO4_26800 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.1e-206 722.6 535 80.2
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea HOM05D004842 ORTHO05D005929 3.6e-206 721.8 514 87.0
RcHm_v2.0_Chr7g0230731 Rosa chinensis HOM05D004842 ORTHO05D005929 3.6e-206 721.8 514 81.7
Carub.0002s2047 Capsella rubella HOM05D004842 ORTHO05D005929 6.1e-206 721.1 511 82.4
QL09p004408 Quercus lobata HOM05D004842 ORTHO05D005929 6.1e-206 721.1 513 81.1
FvH4_5g32860 Fragaria vesca HOM05D004842 ORTHO05D005929 3.0e-205 718.8 514 81.3
FAN18G3613 Fragaria x ananassa HOM05D004842 ORTHO05D005929 3.0e-205 718.8 514 81.3
SHI07326 Sapria himalayana HOM05D004842 ORTHO05D005929 3.0e-205 718.8 515 84.7
BcaB03g15725 Brassica carinata HOM05D004842 ORTHO05D005929 5.2e-205 718.0 511 80.0
A07p39580 Brassica napus HOM05D004842 ORTHO05D005929 1.5e-204 716.5 511 84.0
C06p47870 Brassica napus HOM05D004842 ORTHO05D005929 1.3e-203 713.4 509 83.9
BolC6t39822H Brassica oleracea HOM05D004842 ORTHO05D005929 1.3e-203 713.4 509 83.9
CARHR066790 Cardamine hirsuta HOM05D004842 ORTHO05D005929 1.3e-203 713.4 511 78.7
BcaB03g15078 Brassica carinata HOM05D004842 ORTHO05D005929 2.8e-203 712.2 511 83.6
FAN04G0777 Fragaria x ananassa HOM05D004842 ORTHO05D005929 4.1e-202 708.4 542 77.5
AL2G33520 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 2.9e-200 702.2 500 82.6
Dinv07060 Davidia involucrata HOM05D004842 ORTHO05D005929 2.9e-200 702.2 514 74.1
Nitab4.5_0001799g0050 Nicotiana tabacum HOM05D004842 ORTHO05D005929 5.0e-200 701.4 509 85.7
Nitab4.5_0006564g0010 Nicotiana tabacum HOM05D004842 ORTHO05D005929 3.2e-199 698.7 485 87.2
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis HOM05D004842 ORTHO05D005929 1.6e-198 696.4 557 77.6
FAN08G0446 Fragaria x ananassa HOM05D004842 ORTHO05D005929 8.0e-198 694.1 514 80.0
CBR_g5735 Chara braunii HOM05D004842 ORTHO05D005929 8.8e-197 690.6 514 82.7
Pp3c11_23660 Physcomitrium patens HOM05D004842 ORTHO05D005929 1.2e-196 690.3 514 79.6
Pp3c7_2610 Physcomitrium patens HOM05D004842 ORTHO05D005929 3.4e-196 688.7 514 81.5
AT1G73720 Arabidopsis thaliana HOM05D004842 ORTHO05D005929 7.5e-196 687.6 511 83.2
BraA07t31507Z Brassica rapa HOM05D004842 ORTHO05D005929 9.8e-196 687.2 520 81.0
TAR375G0910 Trochodendron aralioides HOM05D004842 ORTHO05D005929 2.2e-195 686.0 464 93.8
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea HOM05D004842 ORTHO05D005929 2.8e-195 685.6 535 78.7
AUR62000532 Chenopodium quinoa HOM05D004842 ORTHO05D005929 1.1e-191 673.7 514 73.0
Peaxi162Scf00688g00227 Petunia axillaris HOM05D004842 ORTHO05D005929 1.0e-189 667.2 484 84.7
CANSAT21G1785 Cannabis sativa HOM05D004842 ORTHO05D005929 3.2e-186 655.6 525 79.4
unitig_748.g7731 Utricularia gibba HOM05D004842 ORTHO05D005929 2.0e-185 652.9 551 67.7
SMO119G0417 Selaginella moellendorffii HOM05D004842 ORTHO05D005929 2.5e-183 646.0 511 71.8
Sc20g0002260 Simmondsia chinensis HOM05D004842 ORTHO05D005929 4.7e-182 641.7 468 85.9
Nitab4.5_0000748g0110 Nicotiana tabacum HOM05D004842 ORTHO05D005929 1.4e-181 640.2 513 81.1
vmacro00929 Vaccinium macrocarpon HOM05D004842 ORTHO05D005929 4.9e-171 605.1 435 83.7
Manes.01G021200 Manihot esculenta HOM05D004842 ORTHO05D005929 4.1e-170 602.1 430 88.8
COL.COLO4_24626 Corchorus olitorius HOM05D004842 ORTHO05D005929 2.3e-168 596.3 428 86.7
SEGI_07677 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 2.4e-154 549.7 414 85.3
BcaC08g46793 Brassica carinata HOM05D004842 ORTHO05D005929 4.2e-154 548.9 511 66.7
Cre01.g020400 Chlamydomonas reinhardtii HOM05D004842 ORTHO05D005929 3.9e-152 542.3 511 67.5
EL10Ac4g09640 Beta vulgaris HOM05D004842 ORTHO05D005929 1.2e-137 494.2 269 89.2
TPR.G33753 Trifolium pratense HOM05D004842 ORTHO05D005929 1.5e-127 460.7 254 90.2
Zm00001eb130810 Zea mays HOM05D004842 ORTHO05D005929 3.9e-120 436.0 308 79.5
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla HOM05D004842 ORTHO05D005929 4.3e-119 432.6 322 82.6
EL10Ac4g09644 Beta vulgaris HOM05D004842 ORTHO05D005929 3.3e-111 406.4 385 59.0
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea HOM05D004842 ORTHO05D005929 5.3e-101 372.5 210 89.5
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea HOM05D004842 ORTHO05D005929 1.2e-100 371.3 210 89.0
Lj9C233G3 Lonicera japonica HOM05D004842 ORTHO05D005929 5.7e-87 325.9 365 72.6
Actinidia15960 Actinidia chinensis HOM05D004842 ORTHO05D005929 8.0e-73 278.9 257 79.0
PRCOL_00002301 Prasinoderma coloniale HOM05D004842 ORTHO05D005929 1.4e-72 278.1 521 48.9
EL10Ac4g09638 Beta vulgaris HOM05D004842 ORTHO05D005929 6.8e-64 249.2 175 84.0
Haze_13915 Corylus avellana HOM05D004842 ORTHO05D005929 3.7e-62 243.4 134 93.3
C06p33880 Brassica napus HOM05D004842 ORTHO05D005929 2.7e-60 237.3 526 34.2
PSO384G0554 Papaver somniferum HOM05D004842 ORTHO05D005929 3.9e-51 206.8 99 96.0
Ca_03946_v3 Cicer arietinum L. HOM05D004842 ORTHO05D005929 1.2e-39 168.7 105 77.1
Haze_27333 Corylus avellana HOM05D004842 ORTHO05D005929 1.2e-39 168.7 254 39.8
Cpa.g.c40110 Carica papaya HOM05D004842 ORTHO05D005929 1.7e-35 154.8 80 87.5
SEGI_19922 Sequoiadendron giganteum HOM05D004842 ORTHO05D005929 2.1e-33 147.9 80 91.2
BolC2t07949H Brassica oleracea HOM05D004842 ORTHO05D005929 5.3e-32 143.3 137 61.3
Sabra16G0312200 Salix brachista HOM05D004842 ORTHO05D005929 5.3e-32 143.3 175 52.6
RcHm_v2.0_Chr6g0269341 Rosa chinensis HOM05D004842 ORTHO05D005929 1.3e-30 138.7 107 69.2
AL6G46370 Arabidopsis lyrata HOM05D004842 ORTHO05D005929 1.6e-28 131.7 344 28.5
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.3e-27 128.6 70 87.1
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 7.4e-26 122.9 69 84.1
C05p58610 Brassica napus HOM05D004842 ORTHO05D009094 8.1e-25 119.4 64 84.4
BolC4t22950H Brassica oleracea HOM05D004842 ORTHO05D005929 8.1e-25 119.4 64 84.4
Duzib211G0352 Durio zibethinus HOM05D004842 ORTHO05D005929 5.5e-21 106.7 56 85.7
BolC6t38501H Brassica oleracea HOM05D004842 ORTHO05D005929 5.1e-19 100.1 56 75.0
Actinidia15959 Actinidia chinensis HOM05D004842 ORTHO05D005929 1.4e-16 92.0 47 97.9
TPR.G15252 Trifolium pratense HOM05D004842 ORTHO05D005929 2.4e-16 91.3 47 85.1
Glyma.04G106300 Glycine max HOM05D004842 ORTHO05D005929 3.4e-15 87.4 70 60.0
Glyma.04G149500 Glycine max HOM05D004842 ORTHO05D005929 3.4e-15 87.4 70 60.0
ECA238G3245 Erigeron canadensis HOM05D000757 ORTHO05D000622 1.9e-13 81.6 41 90.2
ECA248G1356 Erigeron canadensis HOM05D006056 ORTHO05D007136 5.5e-13 80.1 41 87.8
Actinidia15961 Actinidia chinensis HOM05D004842 ORTHO05D005929 7.9e-12 76.3 122 38.5
Sed0018019 Sechium edule HOM05D004842 ORTHO05D005929 1.0e-11 75.9 105 41.9
Cfa012955 Carpinus fangiana HOM05D002874 ORTHO05D003250 3.9e-11 73.9 36 86.1
TPR.G33759 Trifolium pratense HOM05D004842 ORTHO05D005929 1.2e-07 62.4 134 72.4
TPR.G36494 Trifolium pratense HOM05D009291 ORTHO05D010716 5.9e-07 60.1 25 100.0
C04p47590 Brassica napus HOM05D007212 ORTHO05D009094 7.6e-07 59.7 35 74.3


User provided reference genes

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