Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO729G0038 Papaver somniferum HOM05D003161 ORTHO05D037274 1.0e-78 296.6 143 100.0
PSO170G5032 Papaver somniferum HOM05D003161 ORTHO05D037274 7.7e-42 174.1 146 63.7
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 1.4e-27 126.7 75 81.3
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 1.4e-27 126.7 75 81.3
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 4.0e-22 108.6 89 59.6
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 8.9e-22 107.5 89 57.3
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 8.9e-22 107.5 75 70.7
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.2e-21 107.1 75 66.7
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 1.5e-21 106.7 78 65.4
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 2.6e-21 105.9 70 72.9
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.6e-21 105.9 70 72.9
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.6e-21 105.9 70 72.9
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.6e-21 105.9 70 72.9
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.6e-21 105.9 70 72.9
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 2.6e-21 105.9 70 72.9
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 3.4e-21 105.5 78 62.8
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 3.4e-21 105.5 70 71.4
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 3.4e-21 105.5 75 68.0
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 7.5e-21 104.4 78 64.1
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 7.5e-21 104.4 78 64.1
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 7.5e-21 104.4 75 65.3
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 1.3e-20 103.6 78 61.5
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 1.3e-20 103.6 75 62.7
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 1.3e-20 103.6 70 74.3
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 1.7e-20 103.2 75 68.0
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.2e-20 102.8 78 60.3
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 2.2e-20 102.8 89 55.1
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 2.2e-20 102.8 78 64.1
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 2.2e-20 102.8 78 62.8
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 2.9e-20 102.4 89 56.2
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 2.9e-20 102.4 70 70.0
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 3.7e-20 102.1 78 64.1
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 6.4e-20 101.3 89 52.8
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 8.3e-20 100.9 75 64.0
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 8.3e-20 100.9 78 61.5
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 8.3e-20 100.9 78 61.5
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 8.3e-20 100.9 75 65.3
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.4e-19 100.1 70 70.0
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 1.4e-19 100.1 75 61.3
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 1.9e-19 99.8 80 58.8
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 2.4e-19 99.4 75 64.0
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 3.2e-19 99.0 80 58.8
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 4.1e-19 98.6 70 67.1
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 4.1e-19 98.6 75 64.0
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 4.1e-19 98.6 75 64.0
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 5.4e-19 98.2 75 61.3
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 5.4e-19 98.2 75 62.7
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 9.2e-19 97.4 80 53.8
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 9.2e-19 97.4 75 62.7
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 1.2e-18 97.1 75 60.0
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.6e-18 96.7 65 70.8
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 2.1e-18 96.3 75 60.0
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 2.1e-18 96.3 125 43.2
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 2.7e-18 95.9 71 64.8
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 3.5e-18 95.5 75 61.3
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 3.5e-18 95.5 70 62.9
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 3.5e-18 95.5 75 61.3
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 3.5e-18 95.5 75 61.3
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 6.0e-18 94.7 75 61.3
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 7.8e-18 94.4 75 60.0
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 1.0e-17 94.0 89 50.6
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 1.0e-17 94.0 70 65.7
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 1.3e-17 93.6 75 58.7
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 1.7e-17 93.2 75 58.7
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 2.3e-17 92.8 75 57.3
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.0e-17 92.4 75 57.3
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 3.9e-17 92.0 75 57.3
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 3.9e-17 92.0 78 55.1
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 3.9e-17 92.0 75 58.7
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 3.9e-17 92.0 75 58.7
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 3.9e-17 92.0 75 58.7
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 5.0e-17 91.7 75 57.3
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 8.6e-17 90.9 75 56.0
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 8.6e-17 90.9 75 57.3
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.1e-16 90.5 78 52.6
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 1.1e-16 90.5 78 52.6
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 1.5e-16 90.1 75 56.0
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 1.5e-16 90.1 75 54.7
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 1.5e-16 90.1 75 54.7
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 1.5e-16 90.1 89 51.7
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 1.9e-16 89.7 70 60.0
vmacro22127 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 1.9e-16 89.7 102 52.0
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 3.3e-16 89.0 78 51.3
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 3.3e-16 89.0 78 51.3
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 3.3e-16 89.0 78 51.3
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 3.3e-16 89.0 75 56.0
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 3.3e-16 89.0 75 54.7
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 4.3e-16 88.6 75 54.7
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 4.3e-16 88.6 75 56.0
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 5.6e-16 88.2 75 54.7
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 9.5e-16 87.4 75 53.3
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 1.2e-15 87.0 89 48.3
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 1.2e-15 87.0 75 53.3
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.2e-15 87.0 69 56.5
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 1.6e-15 86.7 75 54.7
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 1.6e-15 86.7 69 56.5
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 6.2e-15 84.7 75 52.0
SEGI_22431 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 1.8e-14 83.2 75 49.3
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 3.1e-14 82.4 65 60.0
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 2.0e-13 79.7 75 54.7
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 4.9e-12 75.1 75 52.0
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 1.9e-11 73.2 51 66.7
vmacro22130 Vaccinium macrocarpon HOM05D003161 ORTHO05D037274 2.4e-11 72.8 49 71.4
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 9.2e-11 70.9 51 64.7
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 1.0e-09 67.4 70 44.3
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 6.6e-09 64.7 70 44.3
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 1.5e-08 63.5 53 50.9


User provided reference genes

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