Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G4333 Papaver somniferum HOM05D003850 ORTHO05D004515 8.4e-194 680.2 362 100.0
PSO339G5270 Papaver somniferum HOM05D003850 ORTHO05D004515 2.7e-123 446.0 367 75.5
PSO210G4264 Papaver somniferum HOM05D003850 ORTHO05D004515 7.0e-39 165.6 172 65.7
Nn1g03331 Nelumbo nucifera HOM05D003850 ORTHO05D004515 1.8e-34 151.0 223 51.1
MBI16_g42266_MAGBIO Magnolia biondii HOM05D003850 ORTHO05D004515 1.8e-31 141.0 171 56.1
Lj8A171G42 Lonicera japonica HOM05D003850 ORTHO05D004515 2.4e-31 140.6 189 53.4
Atru.chr1.2461 Acer truncatum HOM05D003850 ORTHO05D004515 1.6e-30 137.9 176 53.4
Cfa000110 Carpinus fangiana HOM05D003850 ORTHO05D004515 1.7e-29 134.4 175 53.7
Duzib160G0220 Durio zibethinus HOM05D003850 ORTHO05D004515 3.8e-29 133.3 190 53.7
Nn1g07354 Nelumbo nucifera HOM05D003850 ORTHO05D004515 8.5e-29 132.1 175 54.9
QL05p069776 Quercus lobata HOM05D003850 ORTHO05D004515 8.5e-29 132.1 175 52.0
QL09p006300 Quercus lobata HOM05D003850 ORTHO05D004515 8.5e-29 132.1 175 52.0
Eucgr.E03951 Eucalyptus grandis HOM05D003850 ORTHO05D004515 1.1e-28 131.7 176 51.7
PSO339G3925 Papaver somniferum HOM05D003850 ORTHO05D004515 1.5e-28 131.3 174 54.6
GSVIVG01003352001 Vitis vinifera HOM05D003850 ORTHO05D004515 1.5e-28 131.3 173 54.9
CSS0032808 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 2.5e-28 130.6 171 55.6
Potri.006G009100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.5e-28 130.6 170 55.9
Sabra06G0006900 Salix brachista HOM05D003850 ORTHO05D004515 1.2e-27 128.3 178 53.4
Duzib235G1223 Durio zibethinus HOM05D003850 ORTHO05D004515 2.7e-27 127.1 191 52.4
CSS0007684 Camellia sinensis var. sinensis HOM05D003850 ORTHO05D004515 4.7e-27 126.3 176 52.8
Ciclev10014841m.g Citrus clementina HOM05D003850 ORTHO05D004515 6.1e-27 125.9 175 49.7
TAR624G0821 Trochodendron aralioides HOM05D003850 ORTHO05D004515 6.1e-27 125.9 176 50.6
ATR0751G086 Amborella trichopoda HOM05D003850 ORTHO05D004515 3.0e-26 123.6 226 44.2
RhsimUnG0025700 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.2e-26 122.9 192 51.0
RhsimUnG0028500 Rhododendron simsii HOM05D003850 ORTHO05D004515 5.2e-26 122.9 192 51.0
Peaxi162Scf00558g00516 Petunia axillaris HOM05D003850 ORTHO05D004515 8.8e-26 122.1 188 48.9
TAR629G2665 Trochodendron aralioides HOM05D003850 ORTHO05D004515 1.2e-25 121.7 171 49.7
CANSAT56G0590 Cannabis sativa HOM05D003850 ORTHO05D004515 4.4e-25 119.8 172 52.9
SalBow8G5272 Salvia bowleyana HOM05D003850 ORTHO05D004515 5.7e-25 119.4 179 50.3
Thecc.06G232700 Theobroma cacao HOM05D003850 ORTHO05D004515 3.7e-24 116.7 186 50.5
COL.COLO4_31876 Corchorus olitorius HOM05D003850 ORTHO05D004515 6.3e-24 115.9 234 41.9
Nitab4.5_0001198g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 6.3e-24 115.9 142 55.6
Aqoxy1G04110 Aquilegia oxysepala HOM05D003850 ORTHO05D004515 1.1e-23 115.2 221 43.0
CAN.G1186.28 Capsicum annuum HOM05D003850 ORTHO05D004515 1.8e-23 114.4 156 48.1
PGSC0003DMG400013344 Solanum tuberosum HOM05D003850 ORTHO05D004515 1.8e-23 114.4 149 52.3
AUR62021872 Chenopodium quinoa HOM05D003850 ORTHO05D004515 4.1e-23 113.2 214 45.8
Oeu002760.2 Olea europaea HOM05D003850 ORTHO05D004515 4.1e-23 113.2 171 51.5
VMungo0540G1287 Vigna mungo HOM05D003850 ORTHO05D004515 7.0e-23 112.5 174 47.7
AUR62012783 Chenopodium quinoa HOM05D003850 ORTHO05D004515 9.1e-23 112.1 216 44.9
Zm00001eb224360 Zea mays HOM05D003850 ORTHO05D004515 1.2e-22 111.7 218 43.6
Sabra16G0000900 Salix brachista HOM05D003850 ORTHO05D004515 1.6e-22 111.3 182 48.9
CDE04G2591 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 2.0e-22 110.9 146 53.4
Solyc11g012150.3 Solanum lycopersicum HOM05D003850 ORTHO05D004515 2.0e-22 110.9 149 51.7
THA.LOC104812992 Tarenaya hassleriana HOM05D003850 ORTHO05D004515 3.5e-22 110.2 176 49.4
Sopen11g006940 Solanum pennellii HOM05D003850 ORTHO05D004515 4.5e-22 109.8 149 51.7
Actinidia11880 Actinidia chinensis HOM05D003850 ORTHO05D004515 1.0e-21 108.6 178 48.9
EL10Ac8g20176 Beta vulgaris HOM05D003850 ORTHO05D004515 1.0e-21 108.6 169 50.3
Migut.M01390 Erythranthe guttata HOM05D003850 ORTHO05D004515 1.0e-21 108.6 151 53.6
MD10G1331000 Malus domestica HOM05D003850 ORTHO05D004515 1.3e-21 108.2 174 47.7
RcHm_v2.0_Chr5g0001581 Rosa chinensis HOM05D003850 ORTHO05D004515 1.3e-21 108.2 177 49.2
MSTRG.7170 Avicennia marina HOM05D003850 ORTHO05D004515 2.3e-21 107.5 159 51.6
Haze_08659 Corylus avellana HOM05D003850 ORTHO05D004515 3.8e-21 106.7 211 43.1
CiPaw.10G077600 Carya illinoinensis HOM05D003850 ORTHO05D004515 5.0e-21 106.3 175 45.7
Cc09_g00920 Coffea canephora HOM05D003850 ORTHO05D004515 5.0e-21 106.3 176 47.2
HPP92_001629 Vanilla planifolia HOM05D003850 ORTHO05D004515 5.0e-21 106.3 219 44.3
CARHR253560 Cardamine hirsuta HOM05D003850 ORTHO05D004515 1.1e-20 105.1 174 44.3
CiPaw.09G102000 Carya illinoinensis HOM05D003850 ORTHO05D004515 1.1e-20 105.1 174 47.1
Medtr2g025590 Medicago truncatula HOM05D003850 ORTHO05D004515 1.1e-20 105.1 166 49.4
Phvul.003G083500 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 1.5e-20 104.8 176 46.0
Prupe.4G011300 Prunus persica HOM05D003850 ORTHO05D004515 1.9e-20 104.4 175 49.1
PGR102G0753 Punica granatum HOM05D003850 ORTHO05D004515 3.3e-20 103.6 176 44.9
arahy.Tifrunner.gnm1.ann1.C17RPB Arachis hypogaea HOM05D003850 ORTHO05D004515 5.5e-20 102.8 174 46.0
Hund23984 Selenicereus undatus HOM05D003850 ORTHO05D004515 7.2e-20 102.4 173 48.6
Sabra16G0017100 Salix brachista HOM05D003850 ORTHO05D004515 9.5e-20 102.1 203 42.9
AL6G47570 Arabidopsis lyrata HOM05D003850 ORTHO05D004515 1.2e-19 101.7 175 46.3
PSO302G0165 Papaver somniferum HOM05D003850 ORTHO05D004515 1.6e-19 101.3 77 77.9
CsaV3_3G028740 Cucumis sativus L. HOM05D003850 ORTHO05D004515 2.8e-19 100.5 173 46.8
arahy.Tifrunner.gnm1.ann1.0C9QHL Arachis hypogaea HOM05D003850 ORTHO05D004515 3.6e-19 100.1 180 41.7
MD05G1357300 Malus domestica HOM05D003850 ORTHO05D004515 3.6e-19 100.1 175 45.7
VMungo1215G3075 Vigna mungo HOM05D003850 ORTHO05D004515 4.7e-19 99.8 174 46.0
SHI24464 Sapria himalayana HOM05D003850 ORTHO05D004515 6.1e-19 99.4 232 38.8
arahy.Tifrunner.gnm1.ann1.IIR6TV Arachis hypogaea HOM05D003850 ORTHO05D004515 8.0e-19 99.0 172 44.2
vmacro15772 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 8.0e-19 99.0 169 47.3
FAN25G3770 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.0e-18 98.6 176 44.3
TPR.G13041 Trifolium pratense HOM05D003850 ORTHO05D004515 1.0e-18 98.6 166 48.2
ClCG07G001740 Citrullus lanatus HOM05D003850 ORTHO05D004515 1.4e-18 98.2 168 47.6
DCAR_025996 Daucus carota HOM05D003850 ORTHO05D004515 1.8e-18 97.8 181 46.4
MELO3C012788.2 Cucumis melo HOM05D003850 ORTHO05D004515 2.3e-18 97.4 173 46.2
Carub.0006s3188 Capsella rubella HOM05D003850 ORTHO05D004515 3.0e-18 97.1 172 46.5
Ca_00718_v3 Cicer arietinum L. HOM05D003850 ORTHO05D004515 3.0e-18 97.1 172 46.5
Manes.07G088900 Manihot esculenta HOM05D003850 ORTHO05D004515 3.0e-18 97.1 159 49.7
arahy.Tifrunner.gnm1.ann1.97WSNQ Arachis hypogaea HOM05D003850 ORTHO05D004515 6.8e-18 95.9 178 41.6
Sed0003006 Sechium edule HOM05D003850 ORTHO05D004515 6.8e-18 95.9 170 47.6
Lj4g0025543 Lotus japonicus HOM05D003850 ORTHO05D004515 8.9e-18 95.5 194 43.8
Thhalv10028564m.g Eutrema salsugineum HOM05D003850 ORTHO05D004515 1.5e-17 94.7 174 45.4
Psat1g176560 Pisum sativum HOM05D003850 ORTHO05D004515 2.0e-17 94.4 169 45.6
Gohir.D06G159600 Gossypium hirsutum HOM05D003850 ORTHO05D004515 4.4e-17 93.2 134 49.3
FvH4_3g01042 Fragaria vesca HOM05D003850 ORTHO05D004515 7.5e-17 92.4 144 47.9
Oeu044421.3 Olea europaea HOM05D003850 ORTHO05D004515 7.5e-17 92.4 222 40.5
FAN21G1422 Fragaria x ananassa HOM05D003850 ORTHO05D004515 1.3e-16 91.7 144 47.2
SGA_v2.0_scaffold4G01878 Striga asiatica HOM05D003850 ORTHO05D004515 1.3e-16 91.7 158 46.2
HanXRQChr15g0470091 Helianthus annuus HOM05D003850 ORTHO05D004515 2.2e-16 90.9 117 45.3
Phvul.006G143600 Phaseolus vulgaris HOM05D003850 ORTHO05D004515 2.2e-16 90.9 175 44.6
AT4G12610 Arabidopsis thaliana HOM05D003850 ORTHO05D004515 8.3e-16 89.0 164 47.0
Cpa.g.sc75.120 Carica papaya HOM05D003850 ORTHO05D004515 1.1e-15 88.6 172 47.1
CDE06G0619 Ceratophyllum demersum HOM05D003850 ORTHO05D004515 1.1e-15 88.6 84 56.0
Gorai.010G186300 Gossypium raimondii HOM05D003850 ORTHO05D004515 1.1e-15 88.6 172 44.8
BcaB01g01757 Brassica carinata HOM05D003850 ORTHO05D004515 1.4e-15 88.2 189 39.7
Gohir.A06G153120 Gossypium hirsutum HOM05D003850 ORTHO05D004515 5.4e-15 86.3 172 43.6
C03p36090 Brassica napus HOM05D003850 ORTHO05D004515 7.0e-15 85.9 173 42.8
Lsat_1_v5_gn_7_13561 Lactuca sativa HOM05D003850 ORTHO05D004515 1.6e-14 84.7 78 59.0
Potri.016G015100 Populus trichocarpa HOM05D003850 ORTHO05D004515 2.0e-14 84.3 66 66.7
HPP92_001647 Vanilla planifolia HOM05D003850 ORTHO05D004515 2.0e-14 84.3 75 61.3
A03p29830 Brassica napus HOM05D003850 ORTHO05D004515 2.7e-14 84.0 174 43.7
ECA233G3046 Erigeron canadensis HOM05D003850 ORTHO05D004515 2.7e-14 84.0 147 38.8
Nitab4.5_0000143g0310 Nicotiana tabacum HOM05D003850 ORTHO05D004515 3.5e-14 83.6 94 56.4
BraA03t12173Z Brassica rapa HOM05D003850 ORTHO05D004515 4.5e-14 83.2 176 43.2
Sp6g04900 Schrenkiella parvula HOM05D003850 ORTHO05D004515 4.5e-14 83.2 170 41.8
BcaC01g04577 Brassica carinata HOM05D003850 ORTHO05D004515 1.0e-13 82.0 176 42.6
BolC3t15918H Brassica oleracea HOM05D003850 ORTHO05D004515 1.0e-13 82.0 176 42.6
Glyma.09G009900 Glycine max HOM05D003850 ORTHO05D004515 1.3e-13 81.6 171 40.9
Sc17g0007710 Simmondsia chinensis HOM05D003850 ORTHO05D004515 1.5e-12 78.2 138 44.9
BcaB01g02623 Brassica carinata HOM05D003850 ORTHO05D004515 1.9e-12 77.8 65 67.7
TPR.G3343 Trifolium pratense HOM05D003850 ORTHO05D004515 2.5e-12 77.4 86 47.7
Lj6g0013016 Lotus japonicus HOM05D003850 ORTHO05D004515 5.6e-12 76.3 74 58.1
SEGI_18521 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 5.6e-12 76.3 66 56.1
BraA09t38246Z Brassica rapa HOM05D003850 ORTHO05D004515 9.5e-12 75.5 85 52.9
Aa31LG9G10040 Aethionema arabicum HOM05D003850 ORTHO05D004515 1.6e-11 74.7 171 39.2
A09p26740 Brassica napus HOM05D003850 ORTHO05D004515 3.6e-11 73.6 65 64.6
Glyma.15G114200 Glycine max HOM05D003850 ORTHO05D004515 4.7e-11 73.2 75 58.7
arahy.Tifrunner.gnm1.ann1.5H9H8Z Arachis hypogaea HOM05D003850 ORTHO05D004515 6.1e-11 72.8 109 48.6
Pp3c3_2280 Physcomitrium patens HOM05D003850 ORTHO05D004515 6.1e-11 72.8 213 34.7
BcaC04g21251 Brassica carinata HOM05D003850 ORTHO05D004515 2.3e-10 70.9 54 68.5
C09p33830 Brassica napus HOM05D003850 ORTHO05D004515 2.3e-10 70.9 54 68.5
arahy.Tifrunner.gnm1.ann1.4A53N1 Arachis hypogaea HOM05D003850 ORTHO05D004515 4.0e-10 70.1 112 46.4
arahy.Tifrunner.gnm1.ann1.N7GRQP Arachis hypogaea HOM05D003850 ORTHO05D004515 1.2e-09 68.6 68 55.9
arahy.Tifrunner.gnm1.ann1.UE8YUV Arachis hypogaea HOM05D003850 ORTHO05D004515 1.2e-09 68.6 68 55.9
Nitab4.5_0006771g0010 Nicotiana tabacum HOM05D003850 ORTHO05D004515 1.5e-09 68.2 94 43.6
Nitab4.5_0013082g0020 Nicotiana tabacum HOM05D003850 ORTHO05D004515 2.0e-09 67.8 105 39.0
vmacro03646 Vaccinium macrocarpon HOM05D003850 ORTHO05D004515 7.5e-09 65.9 182 39.0
RcHm_v2.0_Chr5g0007791 Rosa chinensis HOM05D003850 ORTHO05D004515 1.3e-08 65.1 219 33.8
unitig_748.g7103 Utricularia gibba HOM05D003850 ORTHO05D004515 1.3e-08 65.1 121 43.0
FAN24G0125 Fragaria x ananassa HOM05D003850 ORTHO05D008045 1.7e-08 64.7 75 52.0
Lalb_Chr20g0119201 Lupinus albus HOM05D003850 ORTHO05D004515 2.9e-08 63.9 179 37.4
FvH4_2g22070 Fragaria vesca HOM05D003850 ORTHO05D004515 4.9e-08 63.2 75 48.0
TWI63G0294 Tripterygium wilfordii HOM05D003850 ORTHO05D004515 6.4e-08 62.8 147 42.9
SEGI_29277 Sequoiadendron giganteum HOM05D003850 ORTHO05D004515 8.3e-08 62.4 109 35.8
BolC9t56221H Brassica oleracea HOM05D003850 ORTHO05D004515 1.4e-07 61.6 145 35.2
CBR_g38329 Chara braunii HOM05D003850 ORTHO05D004515 2.4e-07 60.8 119 34.5
CARHR253550 Cardamine hirsuta HOM05D003850 ORTHO05D004515 7.0e-07 59.3 70 48.6
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 1.2e-06 58.5 76 42.1
Dinv07398 Davidia involucrata HOM05D003850 ORTHO05D004515 2.0e-06 57.8 91 48.4
Lj2A262G45 Lonicera japonica HOM05D003850 ORTHO05D004515 3.5e-06 57.0 141 37.6
PSO339G0182 Papaver somniferum HOM05D009217 ORTHO05D009626 6.0e-06 56.2 174 32.2
Mapoly0105s0015 Marchantia polymorpha HOM05D003850 ORTHO05D004515 7.8e-06 55.8 173 34.7


User provided reference genes

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