Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3517 Papaver somniferum HOM05D003161 ORTHO05D005173 5.8e-197 690.6 337 100.0
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 4.0e-73 279.3 486 42.4
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 4.0e-73 279.3 486 42.4
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 1.9e-54 217.2 487 35.5
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 2.5e-54 216.9 463 36.7
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 4.2e-54 216.1 486 35.6
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 7.1e-54 215.3 485 34.8
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 1.6e-53 214.2 486 35.0
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.6e-53 214.2 486 35.0
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.6e-53 214.2 486 35.0
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 4.6e-53 212.6 486 35.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 7.9e-53 211.8 487 34.5
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 2.3e-52 210.3 482 34.2
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 3.0e-52 209.9 486 34.8
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 6.7e-52 208.8 482 34.2
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 8.7e-52 208.4 486 34.8
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 1.1e-51 208.0 486 34.6
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 1.5e-51 207.6 485 35.1
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 1.5e-51 207.6 485 34.2
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 1.9e-51 207.2 487 34.1
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 2.5e-51 206.8 486 34.2
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 3.3e-51 206.5 486 34.4
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 3.3e-51 206.5 486 33.7
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.3e-51 206.1 483 34.6
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 4.3e-51 206.1 483 34.6
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 1.3e-50 204.5 486 34.6
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 1.3e-50 204.5 486 34.2
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 3.7e-50 203.0 482 34.0
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 3.7e-50 203.0 484 34.3
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 4.8e-50 202.6 486 33.5
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 6.3e-50 202.2 485 34.2
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 6.3e-50 202.2 485 33.2
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 6.3e-50 202.2 417 37.4
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 8.2e-50 201.8 485 34.8
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 8.2e-50 201.8 482 33.4
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 1.1e-49 201.4 487 34.9
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 1.4e-49 201.1 484 34.3
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 1.4e-49 201.1 483 33.5
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 1.8e-49 200.7 487 34.3
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 3.1e-49 199.9 486 33.5
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 4.1e-49 199.5 485 32.6
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 5.3e-49 199.1 484 33.7
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 5.3e-49 199.1 495 33.7
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 6.9e-49 198.7 484 34.3
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 9.0e-49 198.4 492 33.5
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 9.0e-49 198.4 486 32.7
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 9.0e-49 198.4 486 33.1
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 9.0e-49 198.4 486 34.2
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 1.7e-47 194.1 486 33.1
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 2.9e-47 193.4 485 32.4
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 5.0e-47 192.6 487 32.2
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 1.1e-46 191.4 485 32.8
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 1.1e-46 191.4 521 32.1
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 1.9e-46 190.7 460 34.3
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 1.9e-46 190.7 493 32.9
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 4.2e-46 189.5 485 32.8
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 4.2e-46 189.5 488 32.2
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 5.5e-46 189.1 486 32.9
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 5.5e-46 189.1 484 32.2
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 7.2e-46 188.7 485 32.2
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.2e-45 188.0 467 33.2
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 2.1e-45 187.2 508 31.7
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 2.7e-45 186.8 516 32.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 6.1e-45 185.7 486 32.3
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 6.1e-45 185.7 484 32.6
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 7.9e-45 185.3 481 32.4
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 7.9e-45 185.3 484 33.1
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.0e-44 184.9 481 32.4
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 3.0e-44 183.3 478 33.7
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 3.9e-44 183.0 485 32.0
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 5.1e-44 182.6 580 29.5
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 6.7e-44 182.2 482 31.7
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 6.7e-44 182.2 482 31.7
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 8.7e-44 181.8 485 32.4
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 1.5e-43 181.0 484 32.2
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.9e-43 180.6 473 32.8
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 2.5e-43 180.3 486 32.1
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 3.3e-43 179.9 484 32.0
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 4.3e-43 179.5 477 32.3
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 7.4e-43 178.7 486 31.9
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 9.7e-43 178.3 486 31.9
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 3.7e-42 176.4 483 31.9
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 6.3e-42 175.6 483 31.7
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 6.3e-42 175.6 502 31.5
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 1.8e-41 174.1 467 32.5
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 4.1e-41 172.9 500 31.8
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 4.1e-41 172.9 568 28.7
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 1.7e-39 167.5 473 30.7
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 2.2e-39 167.2 483 31.7
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 2.5e-38 163.7 496 29.4
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 7.2e-38 162.2 486 31.7
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 6.1e-37 159.1 488 30.9
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 1.4e-36 157.9 340 36.2
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.3e-36 157.1 452 31.4
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 3.3e-35 153.3 486 30.0
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 2.8e-34 150.2 414 31.4
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 1.4e-30 137.9 410 30.5
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 7.2e-30 135.6 240 39.6
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 7.9e-29 132.1 416 30.3
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.1e-27 128.3 174 45.4
SEGI_22431 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 4.4e-27 126.3 311 31.8
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 5.3e-25 119.4 179 43.6
MD14G1050300 Malus domestica HOM05D003161 ORTHO05D005173 3.5e-24 116.7 439 28.9
vmacro22127 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 4.5e-24 116.3 179 40.2
vmacro22129 Vaccinium macrocarpon HOM05D003161 ORTHO05D015567 1.9e-22 110.9 142 48.6
vmacro22130 Vaccinium macrocarpon HOM05D003161 ORTHO05D037274 4.8e-18 96.3 78 61.5
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 4.1e-17 93.2 530 22.5
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 4.2e-14 83.2 425 24.2
SEGI_32968 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 4.2e-14 83.2 366 25.7
SEGI_29966 Sequoiadendron giganteum HOM05D003161 ORTHO05D015567 9.4e-14 82.0 151 38.4
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 8.0e-13 79.0 525 21.7
Nitab4.5_0000571g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 1.4e-12 78.2 103 47.6
Aa31LG3G5540 Aethionema arabicum HOM05D003161 ORTHO05D005173 6.8e-12 75.9 49 73.5
Nitab4.5_0001364g0080 Nicotiana tabacum HOM05D003161 ORTHO05D015567 6.8e-12 75.9 102 47.1
Cpa.g.sc85.24 Carica papaya HOM05D003161 ORTHO05D015567 2.6e-11 73.9 114 42.1
CAN.G1433.26 Capsicum annuum HOM05D003161 ORTHO05D015567 5.7e-11 72.8 144 37.5
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis HOM05D003161 ORTHO05D005173 2.2e-10 70.9 321 25.5
Hund30424 Selenicereus undatus HOM05D003161 ORTHO05D015567 2.4e-09 67.4 100 44.0
Hund18985 Selenicereus undatus HOM05D003161 ORTHO05D015567 9.1e-09 65.5 121 37.2
Psat7g030280 Pisum sativum HOM05D003161 ORTHO05D005173 1.0e-07 62.0 213 31.0
PSO170G5032 Papaver somniferum HOM05D003161 ORTHO05D037274 7.2e-06 55.8 87 40.2


User provided reference genes

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