Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5032 Papaver somniferum HOM05D003161 ORTHO05D037274 1.2e-100 369.8 175 100.0
PSO729G0038 Papaver somniferum HOM05D003161 ORTHO05D037274 1.2e-41 173.7 146 63.7
PSO339G0479 Papaver somniferum HOM05D003161 ORTHO05D005173 1.0e-32 144.1 164 54.3
PSO384G1659 Papaver somniferum HOM05D003161 ORTHO05D005173 1.0e-32 144.1 164 54.3
Lj2C361G9 Lonicera japonica HOM05D003161 ORTHO05D005173 3.6e-25 119.0 141 46.8
Aqoxy2G02393 Aquilegia oxysepala HOM05D003161 ORTHO05D005173 1.1e-24 117.5 166 42.8
Ciclev10013867m.g Citrus clementina HOM05D003161 ORTHO05D005173 1.4e-24 117.1 166 46.4
Medtr1g054710 Medicago truncatula HOM05D003161 ORTHO05D005173 1.4e-24 117.1 166 42.8
Lj5g0006535 Lotus japonicus HOM05D003161 ORTHO05D005173 4.0e-24 115.5 166 41.6
QL07p025506 Quercus lobata HOM05D003161 ORTHO05D005173 6.8e-24 114.8 166 42.8
Glyma.02G168900 Glycine max HOM05D003161 ORTHO05D005173 8.9e-24 114.4 165 42.4
Psat6g109960 Pisum sativum HOM05D003161 ORTHO05D005173 8.9e-24 114.4 166 41.6
Prupe.7G085700 Prunus persica HOM05D003161 ORTHO05D005173 8.9e-24 114.4 166 42.8
TPR.G14502 Trifolium pratense HOM05D003161 ORTHO05D005173 8.9e-24 114.4 166 41.6
TAR633G1132 Trochodendron aralioides HOM05D003161 ORTHO05D005173 1.2e-23 114.0 166 42.2
Ca_25942_v3 Cicer arietinum L. HOM05D003161 ORTHO05D005173 1.5e-23 113.6 166 41.6
Haze_20072 Corylus avellana HOM05D003161 ORTHO05D005173 2.6e-23 112.8 166 42.2
GSVIVG01033430001 Vitis vinifera HOM05D003161 ORTHO05D005173 2.6e-23 112.8 166 42.2
MD12G1051100 Malus domestica HOM05D003161 ORTHO05D005173 3.4e-23 112.5 161 43.5
Gohir.A09G130300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 5.8e-23 111.7 161 42.9
Phvul.007G270000 Phaseolus vulgaris HOM05D003161 ORTHO05D005173 2.2e-22 109.8 166 40.4
Glyma.09G104000 Glycine max HOM05D003161 ORTHO05D005173 2.9e-22 109.4 166 42.2
PGR004G2129 Punica granatum HOM05D003161 ORTHO05D005173 2.9e-22 109.4 178 38.8
VMungo0720G1738 Vigna mungo HOM05D003161 ORTHO05D005173 3.7e-22 109.0 166 40.4
DCAR_016871 Daucus carota HOM05D003161 ORTHO05D005173 4.9e-22 108.6 166 40.4
Gohir.D09G126300 Gossypium hirsutum HOM05D003161 ORTHO05D005173 6.4e-22 108.2 161 41.6
Gorai.006G145100 Gossypium raimondii HOM05D003161 ORTHO05D005173 6.4e-22 108.2 161 41.6
EL10Ac7g16694 Beta vulgaris HOM05D003161 ORTHO05D005173 8.3e-22 107.8 136 47.1
COL.COLO4_29434 Corchorus olitorius HOM05D003161 ORTHO05D005173 1.9e-21 106.7 165 40.6
Lalb_Chr21g0316111 Lupinus albus HOM05D003161 ORTHO05D005173 1.9e-21 106.7 166 38.6
Manes.09G040300 Manihot esculenta HOM05D003161 ORTHO05D005173 1.9e-21 106.7 166 40.4
FvH4_6g21470 Fragaria vesca HOM05D003161 ORTHO05D005173 2.4e-21 106.3 161 44.1
FAN05G0820 Fragaria x ananassa HOM05D003161 ORTHO05D005173 2.4e-21 106.3 161 44.1
RcHm_v2.0_Chr3g0478661 Rosa chinensis HOM05D003161 ORTHO05D005173 2.4e-21 106.3 161 44.1
Migut.K00013 Erythranthe guttata HOM05D003161 ORTHO05D005173 3.2e-21 105.9 166 40.4
Aa31sc238G10 Aethionema arabicum HOM05D003161 ORTHO05D005173 4.1e-21 105.5 161 40.4
Duzib128G1871 Durio zibethinus HOM05D003161 ORTHO05D005173 4.1e-21 105.5 161 41.0
Nitab4.5_0001364g0070 Nicotiana tabacum HOM05D003161 ORTHO05D005173 4.1e-21 105.5 161 41.6
TWI53G1521 Tripterygium wilfordii HOM05D003161 ORTHO05D005173 5.4e-21 105.1 166 39.8
Actinidia38605 Actinidia chinensis HOM05D003161 ORTHO05D005173 7.1e-21 104.8 166 39.2
Dinv25021 Davidia involucrata HOM05D003161 ORTHO05D005173 7.1e-21 104.8 161 41.6
AT3G11964 Arabidopsis thaliana HOM05D003161 ORTHO05D005173 9.2e-21 104.4 166 40.4
MSTRG.26730 Avicennia marina HOM05D003161 ORTHO05D005173 9.2e-21 104.4 166 38.6
Rhsim04G0093500 Rhododendron simsii HOM05D003161 ORTHO05D005173 9.2e-21 104.4 166 39.2
Sc19g0006250 Simmondsia chinensis HOM05D003161 ORTHO05D005173 9.2e-21 104.4 161 41.6
BcaB04g21101 Brassica carinata HOM05D003161 ORTHO05D005173 1.2e-20 104.0 161 41.6
Cc06_g23250 Coffea canephora HOM05D003161 ORTHO05D005173 1.2e-20 104.0 166 39.2
FAN09G2861 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.2e-20 104.0 158 43.7
Sp3g10190 Schrenkiella parvula HOM05D003161 ORTHO05D005173 1.2e-20 104.0 161 41.0
A05p37390 Brassica napus HOM05D003161 ORTHO05D005173 1.6e-20 103.6 161 39.8
BraA05t22538Z Brassica rapa HOM05D003161 ORTHO05D005173 1.6e-20 103.6 161 39.8
Oeu046733.1 Olea europaea HOM05D003161 ORTHO05D005173 1.6e-20 103.6 166 39.2
Hund19220 Selenicereus undatus HOM05D003161 ORTHO05D005173 2.1e-20 103.2 165 39.4
THA.LOC104826779 Tarenaya hassleriana HOM05D003161 ORTHO05D005173 2.1e-20 103.2 164 39.0
Carub.0003s1130 Capsella rubella HOM05D003161 ORTHO05D005173 2.7e-20 102.8 166 39.2
CAN.G479.45 Capsicum annuum HOM05D003161 ORTHO05D005173 2.7e-20 102.8 166 39.8
Thhalv10019877m.g Eutrema salsugineum HOM05D003161 ORTHO05D005173 2.7e-20 102.8 161 39.1
Sabra16G0064500 Salix brachista HOM05D003161 ORTHO05D005173 2.7e-20 102.8 161 41.0
Solyc03g051900.4 Solanum lycopersicum HOM05D003161 ORTHO05D005173 3.5e-20 102.4 165 38.8
Sopen03g011350 Solanum pennellii HOM05D003161 ORTHO05D005173 3.5e-20 102.4 165 38.8
Thecc.05G180200 Theobroma cacao HOM05D003161 ORTHO05D005173 3.5e-20 102.4 161 40.4
AL3G23570 Arabidopsis lyrata HOM05D003161 ORTHO05D005173 4.6e-20 102.1 166 39.2
BcaC05g29306 Brassica carinata HOM05D003161 ORTHO05D005173 4.6e-20 102.1 161 39.1
C05p55950 Brassica napus HOM05D003161 ORTHO05D005173 4.6e-20 102.1 161 39.1
BolC5t34262H Brassica oleracea HOM05D003161 ORTHO05D005173 4.6e-20 102.1 161 39.1
CiPaw.08G134900 Carya illinoinensis HOM05D003161 ORTHO05D005173 4.6e-20 102.1 166 39.2
Potri.016G062600 Populus trichocarpa HOM05D003161 ORTHO05D005173 6.0e-20 101.7 166 39.2
CARHR086520 Cardamine hirsuta HOM05D003161 ORTHO05D005173 7.8e-20 101.3 161 39.8
Eucgr.A02507 Eucalyptus grandis HOM05D003161 ORTHO05D005173 1.3e-19 100.5 164 38.4
SalBow1G2678 Salvia bowleyana HOM05D003161 ORTHO05D005173 1.7e-19 100.1 166 41.0
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea HOM05D003161 ORTHO05D005173 2.3e-19 99.8 161 38.5
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea HOM05D003161 ORTHO05D005173 2.3e-19 99.8 161 38.5
BcaC09g48184 Brassica carinata HOM05D003161 ORTHO05D005173 3.0e-19 99.4 161 38.5
AUR62041562 Chenopodium quinoa HOM05D003161 ORTHO05D005173 3.0e-19 99.4 161 40.4
Ah.15g091410 Amaranthus hybridus HOM05D003161 ORTHO05D005173 6.6e-19 98.2 157 40.1
CDE02G0114 Ceratophyllum demersum HOM05D003161 ORTHO05D005173 6.6e-19 98.2 161 37.3
AUR62026957 Chenopodium quinoa HOM05D003161 ORTHO05D005173 6.6e-19 98.2 161 40.4
HanXRQChr14g0457761 Helianthus annuus HOM05D003161 ORTHO05D005173 6.6e-19 98.2 161 39.1
Cfa020115 Carpinus fangiana HOM05D003161 ORTHO05D005173 1.1e-18 97.4 141 41.1
Hund19218 Selenicereus undatus HOM05D003161 ORTHO05D005173 1.5e-18 97.1 163 39.3
CSS0010787 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.5e-18 96.3 156 39.7
ECA238G1915 Erigeron canadensis HOM05D003161 ORTHO05D005173 2.5e-18 96.3 161 37.9
Sed0016761 Sechium edule HOM05D003161 ORTHO05D005173 2.5e-18 96.3 166 35.5
CANSAT64G2741 Cannabis sativa HOM05D003161 ORTHO05D005173 4.3e-18 95.5 161 37.9
CsaV3_4G031200 Cucumis sativus L. HOM05D003161 ORTHO05D005173 4.3e-18 95.5 166 36.1
Lsat_1_v5_gn_2_58000 Lactuca sativa HOM05D003161 ORTHO05D005173 4.3e-18 95.5 165 35.8
ATR0737G016 Amborella trichopoda HOM05D003161 ORTHO05D005173 7.3e-18 94.7 161 37.3
MELO3C008994.2 Cucumis melo HOM05D003161 ORTHO05D005173 7.3e-18 94.7 161 36.0
SGA_v2.0_scaffold274G46506 Striga asiatica HOM05D003161 ORTHO05D005173 1.2e-17 94.0 161 37.9
vmacro22127 Vaccinium macrocarpon HOM05D003161 ORTHO05D005173 1.2e-17 94.0 177 36.2
Atru.chr8.1220 Acer truncatum HOM05D003161 ORTHO05D005173 1.6e-17 93.6 109 47.7
CSS0043330 Camellia sinensis var. sinensis HOM05D003161 ORTHO05D005173 2.1e-17 93.2 148 39.9
BraA01t04149Z Brassica rapa HOM05D003161 ORTHO05D005173 3.6e-17 92.4 109 47.7
SEGI_22431 Sequoiadendron giganteum HOM05D003161 ORTHO05D005173 8.1e-17 91.3 165 33.3
FAN05G2723 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.4e-16 90.5 152 42.8
FAN14G4107 Fragaria x ananassa HOM05D003161 ORTHO05D005173 1.4e-16 90.5 152 42.8
vmacro22130 Vaccinium macrocarpon HOM05D003161 ORTHO05D037274 1.4e-16 90.5 109 45.9
BolC1t05277H Brassica oleracea HOM05D003161 ORTHO05D005173 1.8e-16 90.1 109 46.8
Cpa.g.sc85.20 Carica papaya HOM05D003161 ORTHO05D005173 3.1e-16 89.4 156 41.7
Zm00001eb302830 Zea mays HOM05D003161 ORTHO05D005173 3.4e-15 85.9 165 38.8
HPP92_015879 Vanilla planifolia HOM05D003161 ORTHO05D005173 7.6e-15 84.7 109 42.2
HPP92_027317 Vanilla planifolia HOM05D003161 ORTHO05D005173 7.6e-15 84.7 109 42.2
FAN02G0008 Fragaria x ananassa HOM05D003161 ORTHO05D005173 7.1e-13 78.2 110 46.4
unitig_744.g24086 Utricularia gibba HOM05D003161 ORTHO05D005173 6.6e-11 71.6 146 34.2
Pp3c4_30330 Physcomitrium patens HOM05D003161 ORTHO05D005173 7.3e-10 68.2 163 30.7
Mapoly0019s0051 Marchantia polymorpha HOM05D003161 ORTHO05D005173 1.6e-09 67.0 163 27.6
SMO137G0021 Selaginella moellendorffii HOM05D003161 ORTHO05D005173 2.4e-08 63.2 147 31.3
Peaxi162Scf00045g00223 Petunia axillaris HOM05D003161 ORTHO05D005173 4.4e-07 58.9 121 32.2
PSO384G3517 Papaver somniferum HOM05D003161 ORTHO05D005173 1.7e-06 57.0 87 40.2


User provided reference genes

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