Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG400014069 Solanum tuberosum HOM05D006139 ORTHO05D007681 3.6e-163 578.2 287 100.0
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 1.1e-156 556.6 287 95.8
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 6.1e-155 550.8 287 94.8
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 2.7e-150 535.4 287 91.6
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 1.2e-139 500.0 287 86.4
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 3.8e-133 478.4 297 79.8
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 1.2e-131 473.4 293 80.2
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 6.8e-130 467.6 290 79.7
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 9.8e-129 463.8 292 79.1
Atru.chr2.2053 Acer truncatum HOM05D006139 ORTHO05D007681 1.7e-128 463.0 291 78.0
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 3.7e-128 461.8 292 78.8
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 4.9e-128 461.5 292 77.4
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 4.1e-127 458.4 292 78.1
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.6e-126 456.4 249 90.4
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 2.7e-126 455.7 292 76.7
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 2.7e-126 455.7 293 77.5
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 3.5e-126 455.3 290 77.9
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 4.6e-126 454.9 293 76.8
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 1.3e-125 453.4 290 77.6
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 3.9e-125 451.8 292 77.1
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 3.9e-125 451.8 292 76.4
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 8.6e-125 450.7 293 74.7
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 2.1e-123 446.0 289 74.4
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 1.8e-122 443.0 290 74.5
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 2.3e-122 442.6 290 75.9
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 8.9e-122 440.7 331 68.9
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 2.0e-121 439.5 291 75.3
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 3.4e-121 438.7 324 69.4
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 1.3e-120 436.8 289 71.3
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.7e-120 436.4 292 74.0
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 3.7e-120 435.3 291 73.9
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 4.9e-120 434.9 290 73.8
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 8.3e-120 434.1 291 73.2
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 8.3e-120 434.1 290 73.4
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 1.1e-119 433.7 291 74.2
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 2.4e-119 432.6 289 73.7
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 9.2e-119 430.6 289 73.0
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 1.2e-118 430.3 291 72.9
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-118 430.3 291 72.9
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 2.7e-118 429.1 290 72.4
CDE02G2779 Ceratophyllum demersum HOM05D006139 ORTHO05D007681 3.5e-118 428.7 295 73.9
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 4.6e-118 428.3 265 78.9
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 1.7e-117 426.4 289 72.3
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 2.3e-117 426.0 291 72.2
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 2.3e-117 426.0 292 73.3
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 5.1e-117 424.9 292 72.9
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 8.6e-117 424.1 289 71.6
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 7.3e-116 421.0 291 69.8
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 9.5e-116 420.6 292 70.9
HPP92_015930 Vanilla planifolia HOM05D006139 ORTHO05D007681 6.2e-115 417.9 289 69.6
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 1.1e-114 417.2 403 57.3
TPR.G8879 Trifolium pratense HOM05D006139 ORTHO05D007681 1.8e-114 416.4 292 70.5
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 8.9e-114 414.1 291 70.8
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 3.7e-112 408.7 292 69.5
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 4.1e-111 405.2 291 68.7
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 9.2e-111 404.1 295 67.5
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 2.3e-109 399.4 293 65.2
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 3.9e-109 398.7 288 67.7
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 8.6e-109 397.5 291 66.7
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 3.3e-108 395.6 288 66.7
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 4.3e-108 395.2 288 68.4
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 7.3e-108 394.4 293 66.2
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 7.3e-108 394.4 286 67.5
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 9.5e-108 394.0 288 67.0
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 9.5e-108 394.0 288 67.4
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.2e-107 393.7 288 67.4
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 1.2e-107 393.7 291 68.0
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 6.2e-107 391.3 289 67.1
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 2.4e-106 389.4 299 70.6
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 3.1e-106 389.0 287 69.7
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 4.0e-106 388.7 288 66.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 1.5e-105 386.7 288 66.0
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 2.6e-105 386.0 288 66.7
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 4.4e-105 385.2 291 66.7
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 4.4e-105 385.2 286 66.1
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.9e-103 379.8 254 75.2
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 2.1e-102 376.3 285 66.3
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.1e-98 364.0 290 64.8
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 5.3e-98 361.7 305 62.3
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.8e-97 358.2 290 63.4
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.4e-95 353.6 290 63.4
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 6.0e-94 348.2 291 62.2
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 1.7e-93 346.7 311 59.5
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 5.1e-93 345.1 249 70.3
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 1.1e-92 344.0 287 61.3
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 1.6e-91 340.1 296 57.1
DCAR_005496 Daucus carota HOM05D006139 ORTHO05D007681 8.1e-91 337.8 230 73.9
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.6e-86 323.6 249 64.3
TPR.G8907 Trifolium pratense HOM05D006139 ORTHO05D007681 1.0e-85 320.9 227 70.9
SMO361G0769 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 8.1e-83 311.2 288 52.8
SMO361G0513 Selaginella moellendorffii HOM05D006139 ORTHO05D007681 4.0e-82 308.9 289 53.3
AagrBONN_evm.TU.Sc2ySwM_228.1556 Anthoceros agrestis HOM05D006139 ORTHO05D007681 3.3e-76 289.3 291 51.5
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 3.1e-74 282.7 157 86.0
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 4.6e-70 268.9 292 47.3
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 5.7e-68 261.9 294 45.9
Ah.03g143030 Amaranthus hybridus HOM05D006139 ORTHO05D007681 7.4e-60 235.0 185 66.5
Aa31LG7G1410 Aethionema arabicum HOM05D006139 ORTHO05D007681 4.5e-57 225.7 242 51.7
FAN22G0061 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.0e-56 222.2 167 68.3
unitig_578.g15954 Utricularia gibba HOM05D006139 ORTHO05D004041 3.2e-55 219.5 171 64.9
Ca_11425_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 2.9e-48 196.4 134 74.6
arahy.Tifrunner.gnm1.ann1.6RHH59 Arachis hypogaea HOM05D006139 ORTHO05D007681 1.2e-41 174.5 134 64.9
Cre13.g607500 Chlamydomonas reinhardtii HOM05D006139 ORTHO05D007681 1.4e-37 161.0 304 35.9
Ca_11424_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.8e-34 150.6 105 65.7
CANSAT78G0600 Cannabis sativa HOM05D006139 ORTHO05D007681 9.1e-34 148.3 118 61.0
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 3.0e-29 133.3 91 73.6
Cfa021664 Carpinus fangiana HOM05D006139 ORTHO05D007681 1.3e-24 117.9 303 31.0
MCO14G338 Micromonas commoda HOM05D006139 ORTHO05D007681 5.2e-21 105.9 296 30.7
SEGI_31905 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 5.7e-20 102.4 66 65.2
BolC4t22161H Brassica oleracea HOM05D006139 ORTHO05D007681 7.5e-20 102.1 80 62.5
HanXRQChr13g0406711 Helianthus annuus HOM05D006139 ORTHO05D007681 1.6e-17 94.4 57 75.4
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 8.0e-14 82.0 48 72.9
Potri.006G132501 Populus trichocarpa HOM05D006139 ORTHO05D007681 3.7e-11 73.2 77 54.5
Dinv25612 Davidia involucrata HOM05D000447 ORTHO05D007681 6.4e-11 72.4 86 50.0


User provided reference genes

Program Settings