Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049377.1 Olea europaea HOM05D001724 ORTHO05D007284 2.5e-98 362.1 175 100.0
Oeu049406.1 Olea europaea HOM05D001724 ORTHO05D007284 5.9e-52 208.0 274 47.4
Atru.chr2.2823 Acer truncatum HOM05D001724 ORTHO05D007284 1.9e-50 203.0 178 60.7
GSVIVG01014695001 Vitis vinifera HOM05D001724 ORTHO05D007284 8.0e-41 171.0 274 41.6
CSS0036592 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D007284 1.0e-40 170.6 257 42.0
TAR629G2623 Trochodendron aralioides HOM05D001724 ORTHO05D007284 4.0e-40 168.7 274 41.2
Sabra16G0241600 Salix brachista HOM05D001724 ORTHO05D007284 5.2e-40 168.3 274 41.2
Haze_09831 Corylus avellana HOM05D001724 ORTHO05D007284 6.8e-40 167.9 279 40.1
HanXRQChr15g0492631 Helianthus annuus HOM05D001724 ORTHO05D007284 8.9e-40 167.5 273 39.9
Lj8C179G13 Lonicera japonica HOM05D001724 ORTHO05D007284 1.2e-39 167.2 274 42.0
MD03G1027000 Malus domestica HOM05D001724 ORTHO05D007284 7.5e-39 164.5 274 40.1
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 2.9e-38 162.5 274 40.5
SalBow8G2422 Salvia bowleyana HOM05D001724 ORTHO05D007284 2.9e-38 162.5 273 39.2
Migut.M01648 Erythranthe guttata HOM05D001724 ORTHO05D007284 4.9e-38 161.8 248 42.3
Prupe.6G024300 Prunus persica HOM05D001724 ORTHO05D007284 4.9e-38 161.8 274 39.8
Ciclev10010260m.g Citrus clementina HOM05D001724 ORTHO05D007284 8.3e-38 161.0 274 40.1
Rhsim06G0230500 Rhododendron simsii HOM05D001724 ORTHO05D007284 1.4e-37 160.2 274 39.1
Aqoxy4G02217 Aquilegia oxysepala HOM05D001724 ORTHO05D007284 2.4e-37 159.5 274 39.1
Duzib268G0190 Durio zibethinus HOM05D001724 ORTHO05D007284 2.4e-37 159.5 274 39.8
RcHm_v2.0_Chr5g0077011 Rosa chinensis HOM05D001724 ORTHO05D007284 2.4e-37 159.5 274 39.8
PSO541G6316 Papaver somniferum HOM05D001724 ORTHO05D007284 3.2e-37 159.1 274 40.9
ECA236G1337 Erigeron canadensis HOM05D001724 ORTHO05D007284 4.1e-37 158.7 273 39.2
FvH4_3g42960 Fragaria vesca HOM05D001724 ORTHO05D007284 9.2e-37 157.5 274 39.1
FAN16G2293 Fragaria x ananassa HOM05D001724 ORTHO05D007284 9.2e-37 157.5 274 39.1
Gohir.A01G092000 Gossypium hirsutum HOM05D001724 ORTHO05D007284 9.2e-37 157.5 274 40.1
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla HOM05D001724 ORTHO05D007284 1.2e-36 157.1 273 39.2
vmacro11596 Vaccinium macrocarpon HOM05D001724 ORTHO05D007284 1.2e-36 157.1 274 40.1
QL08p003952 Quercus lobata HOM05D001724 ORTHO05D007284 1.6e-36 156.8 274 39.1
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 2.7e-36 156.0 274 39.4
Solyc12g015710.2 Solanum lycopersicum HOM05D001724 ORTHO05D007284 2.7e-36 156.0 274 39.1
PGSC0003DMG402029795 Solanum tuberosum HOM05D001724 ORTHO05D007284 2.7e-36 156.0 274 39.4
Thecc.07G012400 Theobroma cacao HOM05D001724 ORTHO05D007284 2.7e-36 156.0 274 39.1
Lsat_1_v5_gn_7_114320 Lactuca sativa HOM05D001724 ORTHO05D007284 3.5e-36 155.6 273 38.8
MSTRG.15797 Avicennia marina HOM05D001724 ORTHO05D007284 5.9e-36 154.8 274 38.3
FAN25G0452 Fragaria x ananassa HOM05D001724 ORTHO05D007284 5.9e-36 154.8 274 38.3
Peaxi162Scf00006g00319 Petunia axillaris HOM05D001724 ORTHO05D007284 5.9e-36 154.8 274 38.3
TWI56G0926 Tripterygium wilfordii HOM05D001724 ORTHO05D007284 7.8e-36 154.5 274 39.4
Sopen12g007630 Solanum pennellii HOM05D001724 ORTHO05D007284 1.0e-35 154.1 274 38.7
COL.COLO4_09842 Corchorus olitorius HOM05D001724 ORTHO05D007284 1.3e-35 153.7 274 38.3
DCAR_022608 Daucus carota HOM05D001724 ORTHO05D007284 1.3e-35 153.7 272 38.6
Gohir.D01G062200 Gossypium hirsutum HOM05D001724 ORTHO05D007284 1.7e-35 153.3 274 39.1
Gorai.002G100800 Gossypium raimondii HOM05D001724 ORTHO05D007284 1.7e-35 153.3 274 39.1
CiPaw.12G138600 Carya illinoinensis HOM05D001724 ORTHO05D007284 3.9e-35 152.1 274 38.7
PGR031G2084 Punica granatum HOM05D001724 ORTHO05D007284 5.0e-35 151.8 274 39.4
ATR0751G043 Amborella trichopoda HOM05D001724 ORTHO05D007284 6.6e-35 151.4 279 36.9
Ca_06399_v3 Cicer arietinum L. HOM05D001724 ORTHO05D007284 6.6e-35 151.4 274 38.7
Manes.15G059300 Manihot esculenta HOM05D001724 ORTHO05D007284 6.6e-35 151.4 274 39.4
Cpa.g.sc12.118 Carica papaya HOM05D001724 ORTHO05D007284 8.6e-35 151.0 274 38.7
Eucgr.F03687 Eucalyptus grandis HOM05D001724 ORTHO05D007284 8.6e-35 151.0 274 37.2
SGA_v2.0_scaffold168G38565 Striga asiatica HOM05D001724 ORTHO05D007284 1.1e-34 150.6 273 37.7
Glyma.02G301000 Glycine max HOM05D001724 ORTHO05D007284 1.5e-34 150.2 273 38.5
Cc05_g15000 Coffea canephora HOM05D001724 ORTHO05D007284 1.9e-34 149.8 274 38.3
FAN11G2991 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.9e-34 149.8 283 37.8
FAN21G0812 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.9e-34 149.8 283 37.8
VMungo0647G0703 Vigna mungo HOM05D001724 ORTHO05D007284 1.9e-34 149.8 274 39.1
LjContig00081g0019548 Lotus japonicus HOM05D001724 ORTHO05D007284 4.3e-34 148.7 275 38.2
Hund01886 Selenicereus undatus HOM05D001724 ORTHO05D007284 4.3e-34 148.7 274 36.9
Nitab4.5_0000163g0170 Nicotiana tabacum HOM05D001724 ORTHO05D007284 7.3e-34 147.9 284 37.0
Nitab4.5_0010137g0010 Nicotiana tabacum HOM05D001724 ORTHO05D007284 7.3e-34 147.9 274 38.0
unitig_746.g26709 Utricularia gibba HOM05D001724 ORTHO05D007284 7.3e-34 147.9 274 37.6
Lalb_Chr10g0107431 Lupinus albus HOM05D001724 ORTHO05D007284 1.2e-33 147.1 274 38.0
CANSAT11G0717 Cannabis sativa HOM05D001724 ORTHO05D007284 1.6e-33 146.7 274 37.6
Phvul.008G279400 Phaseolus vulgaris HOM05D001724 ORTHO05D007284 1.6e-33 146.7 274 38.3
Medtr5g096020 Medicago truncatula HOM05D001724 ORTHO05D007284 2.1e-33 146.4 273 37.7
Ah.04g166610 Amaranthus hybridus HOM05D001724 ORTHO05D007284 2.8e-33 146.0 274 37.2
TPR.G8601 Trifolium pratense HOM05D001724 ORTHO05D007284 3.6e-33 145.6 274 38.3
Psat2g007080 Pisum sativum HOM05D001724 ORTHO05D007284 4.7e-33 145.2 273 38.1
FvH4_3g43190 Fragaria vesca HOM05D001724 ORTHO05D007284 1.4e-32 143.7 275 36.4
AL3G24930 Arabidopsis lyrata HOM05D001724 ORTHO05D007284 3.1e-32 142.5 274 36.9
HPP92_018204 Vanilla planifolia HOM05D001724 ORTHO05D007284 3.1e-32 142.5 277 35.7
AT3G13180 Arabidopsis thaliana HOM05D001724 ORTHO05D007284 4.0e-32 142.1 277 37.2
C01p51890 Brassica napus HOM05D001724 ORTHO05D007284 4.0e-32 142.1 275 37.5
BolC1t05137H Brassica oleracea HOM05D001724 ORTHO05D007284 4.0e-32 142.1 275 37.5
Carub.0003s1253 Capsella rubella HOM05D001724 ORTHO05D007284 4.0e-32 142.1 274 37.6
THA.LOC104815694 Tarenaya hassleriana HOM05D001724 ORTHO05D007284 5.2e-32 141.7 274 35.8
Sp3g11360 Schrenkiella parvula HOM05D001724 ORTHO05D007284 8.9e-32 141.0 274 36.5
PSO675G5997 Papaver somniferum HOM05D001724 ORTHO05D007284 2.0e-31 139.8 264 39.0
CARHR087770 Cardamine hirsuta HOM05D001724 ORTHO05D007284 2.6e-31 139.4 274 36.9
A01p40360 Brassica napus HOM05D001724 ORTHO05D007284 4.4e-31 138.7 275 36.7
BraA01t04071Z Brassica rapa HOM05D001724 ORTHO05D007284 4.4e-31 138.7 275 36.7
Thhalv10020504m.g Eutrema salsugineum HOM05D001724 ORTHO05D007284 6.4e-30 134.8 274 36.1
Os09g0477900 Oryza sativa ssp. japonica HOM05D001724 ORTHO05D007284 1.4e-29 133.7 274 34.3
Aa31LG8G390 Aethionema arabicum HOM05D001724 ORTHO05D007284 1.0e-27 127.5 315 32.1
EL10Ac4g07557 Beta vulgaris HOM05D001724 ORTHO05D007284 6.6e-27 124.8 300 33.3
SEGI_07558 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 1.5e-26 123.6 274 32.8
Actinidia30393 Actinidia chinensis HOM05D001724 ORTHO05D007284 1.6e-25 120.2 267 34.5
Atru.BG.138.p Acer truncatum HOM05D001724 ORTHO05D007284 2.3e-24 116.3 83 71.1
Sc03g0011450 Simmondsia chinensis HOM05D001724 ORTHO05D007284 2.3e-24 116.3 242 35.1
AUR62036465 Chenopodium quinoa HOM05D001724 ORTHO05D007284 1.7e-22 110.2 222 36.0
MBI14_g06712_MAGBIO Magnolia biondii HOM05D000053 ORTHO05D000035 6.0e-20 101.7 80 66.2
Zm00001eb101440 Zea mays HOM05D001724 ORTHO05D007284 7.8e-20 101.3 242 31.8
Mapoly0080s0050 Marchantia polymorpha HOM05D001724 ORTHO05D007284 6.6e-19 98.2 274 28.8
Glyma.14G013102 Glycine max HOM05D001724 ORTHO05D007284 2.5e-18 96.3 80 63.8
Pp3c27_2290 Physcomitrium patens HOM05D001724 ORTHO05D007284 2.5e-18 96.3 273 27.8
SMO133G0033 Selaginella moellendorffii HOM05D001724 ORTHO05D007284 3.3e-18 95.9 273 28.2
AagrBONN_evm.TU.Sc2ySwM_344.5083 Anthoceros agrestis HOM05D001724 ORTHO05D007284 4.3e-18 95.5 273 28.9
AUR62017112 Chenopodium quinoa HOM05D001724 ORTHO05D007284 7.3e-18 94.7 74 67.6
BcaC02g09300 Brassica carinata HOM05D001724 ORTHO05D007284 1.1e-16 90.9 67 65.7
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 5.2e-16 88.6 96 46.9
A02p30970 Brassica napus HOM05D001724 ORTHO05D007284 6.8e-16 88.2 90 55.6
Potri.001G368500 Populus trichocarpa HOM05D001724 ORTHO05D007284 1.2e-15 87.4 93 51.6
Cre50.g761447 Chlamydomonas reinhardtii HOM05D001724 ORTHO05D007284 1.5e-15 87.0 78 59.0
arahy.Tifrunner.gnm1.ann1.HGG2PG Arachis hypogaea HOM05D001724 ORTHO05D007284 4.4e-15 85.5 93 47.3
CAN.G325.2 Capsicum annuum HOM05D001724 ORTHO05D007284 1.7e-14 83.6 93 50.5
arahy.Tifrunner.gnm1.ann1.AFR4D1 Arachis hypogaea HOM05D001724 ORTHO05D007284 8.4e-14 81.3 93 46.2
FvH4_3g43140 Fragaria vesca HOM05D001724 ORTHO05D007284 1.9e-13 80.1 50 76.0
MBI14_g25881_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D007284 2.4e-13 79.7 68 58.8
MBI14_g40314_MAGBIO Magnolia biondii HOM05D001724 ORTHO05D007284 3.5e-12 75.9 68 57.4
BcaB04g21001 Brassica carinata HOM05D001724 ORTHO05D007284 4.6e-12 75.5 93 44.1
Sc03g0011370 Simmondsia chinensis HOM05D001724 ORTHO05D007284 8.6e-11 71.2 93 44.1
Pp3s46_10 Physcomitrium patens HOM05D001724 ORTHO05D007284 1.2e-09 67.4 78 38.5
PRCOL_00005632 Prasinoderma coloniale HOM05D001724 ORTHO05D007284 6.2e-09 65.1 76 43.4
CDE02G1840 Ceratophyllum demersum HOM05D001724 ORTHO05D007284 1.2e-07 60.8 77 39.0
CAN.G325.3 Capsicum annuum HOM05D001724 ORTHO05D007284 2.6e-07 59.7 49 61.2
C06p32310 Brassica napus HOM05D001724 ORTHO05D007284 3.4e-07 59.3 74 43.2
BolC6t38353H Brassica oleracea HOM05D001724 ORTHO05D007284 3.4e-07 59.3 74 43.2
Medtr3g460700 Medicago truncatula HOM05D003409 ORTHO05D004015 4.4e-07 58.9 83 42.2
BcaC08g45550 Brassica carinata HOM05D001724 ORTHO05D007284 5.8e-07 58.5 36 72.2
RcHm_v2.0_Chr4g0425531 Rosa chinensis HOM05D001724 ORTHO05D007284 1.3e-06 57.4 50 64.0
TPR.G17957 Trifolium pratense HOM05D003409 ORTHO05D004015 1.7e-06 57.0 83 41.0
CSS0010821 Camellia sinensis var. sinensis HOM05D003409 ORTHO05D004015 3.8e-06 55.8 90 40.0
Lj1A892G90 Lonicera japonica HOM05D003409 ORTHO05D004015 3.8e-06 55.8 90 38.9
Psat5g165320 Pisum sativum HOM05D003409 ORTHO05D004015 3.8e-06 55.8 83 39.8
Actinidia35412 Actinidia chinensis HOM05D003409 ORTHO05D004015 4.9e-06 55.5 90 38.9
DCAR_017071 Daucus carota HOM05D003409 ORTHO05D004015 4.9e-06 55.5 90 38.9
RcHm_v2.0_Chr4g0406341 Rosa chinensis HOM05D001724 ORTHO05D007284 4.9e-06 55.5 50 62.0
BcaB05g22238 Brassica carinata HOM05D003409 ORTHO05D004015 6.4e-06 55.1 83 39.8
A02p09450 Brassica napus HOM05D003409 ORTHO05D004015 6.4e-06 55.1 83 39.8
C02p15740 Brassica napus HOM05D003409 ORTHO05D004015 6.4e-06 55.1 83 39.8
BolC2t07681H Brassica oleracea HOM05D003409 ORTHO05D004015 6.4e-06 55.1 83 39.8
BraA02t06009Z Brassica rapa HOM05D003409 ORTHO05D004015 6.4e-06 55.1 83 39.8
Glyma.08G332000 Glycine max HOM05D003409 ORTHO05D004015 6.4e-06 55.1 83 38.6
Glyma.18G075000 Glycine max HOM05D003409 ORTHO05D004015 8.4e-06 54.7 83 38.6


User provided reference genes

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