Gene: AUR62017112
General Information
Structural Information
- Species Chenopodium quinoa
- Gene Identifier AUR62017112
- Transcript Identifier AUR62017112-RA
- Gene Type Coding gene
- Location C_Quinoa_Scaffold_3787 : 3233139-3238845 : negative
Gene Family Information
- ID HOM05D001724
- #Genes/#Species 375/100
- Phylogenetic origin
- ID ORTHO05D007284
- #Genes/#Species 132/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id AUR62017112.v1.0
- pacid 36309788
- uniprot A0A803LQ83
Descriptions
- Description rsmB: Ribosomal RNA small subunit methyltransferase B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0001510 | IEA | GOA Database | RNA methylation | |
GO:0001510 | IEA | InterPro | RNA methylation | |
GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0008168 | IEA | GOA Database | methyltransferase activity | |
GO:0008168 | IEA | InterPro | methyltransferase activity | |
GO:0003723 | IEA | GOA Database | RNA binding | |
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001724 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR035926 | NusB-like superfamily |
IPR023268 | RNA (C5-cytosine) methyltransferase, putative Rsm-related, plant |
IPR001678 | SAM-dependent methyltransferase RsmB/NOP2-type |
IPR023267 | RNA (C5-cytosine) methyltransferase |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
IPR006027 | NusB/RsmB/TIM44 |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |