Gene: Os09g0477900
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os09g0477900
- Transcript Identifier Os09t0477900-01
- Gene Type Coding gene
- Location chr09 : 18293085-18300273 : positive
Gene Family Information
- ID HOM05D001724
- #Genes/#Species 375/100
- Phylogenetic origin
- ID ORTHO05D007284
- #Genes/#Species 132/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os09t0477900-01
- MSU-ID LOC_Os09g30100.2
- MSU-ID LOC_Os09g30100.1
- uniprot Q0J0Y4
Descriptions
- Description NusB/RsmB/TIM44 domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006364 | IEA | GOA Database | rRNA processing | |
| GO:0006364 | IEA | InterPro | rRNA processing | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0001510 | IEA | GOA Database | RNA methylation | |
| GO:0001510 | IEA | InterPro | RNA methylation | |
| GO:0031167 | IEA | GOA Database | rRNA methylation | |
| GO:0032259 | IEA | GOA Database | methylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008649 | IEA | GOA Database | rRNA methyltransferase activity | |
| GO:0008649 | IEA | InterPro | rRNA methyltransferase activity | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D001724 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0008168 | IEA | GOA Database | methyltransferase activity | |
| GO:0008168 | IEA | InterPro | methyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001678 | SAM-dependent methyltransferase RsmB/NOP2-type |
| IPR035926 | NusB-like superfamily |
| IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
| IPR023267 | RNA (C5-cytosine) methyltransferase |
| IPR006027 | NusB/RsmB/TIM44 |
| IPR004573 | rRNA small subunit methyltransferase B |
| IPR023268 | RNA (C5-cytosine) methyltransferase, putative Rsm-related, plant |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |