Gene: CSS0010821
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0010821
- Transcript Identifier CSS0010821.1
- Gene Type Coding gene
- Location Chr5 : 9204047-9211282 : positive
Gene Family Information
- ID HOM05D003409
- #Genes/#Species 201/98
- Phylogenetic origin
- ID ORTHO05D004015
- #Genes/#Species 194/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid CSS0010821.1
Descriptions
- Description PREDICTED: probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase isoform X1 [Vitis vinifera]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006396 | IEA | InterPro | RNA processing | |
GO:0001510 | IEA | InterPro | RNA methylation | |
GO:0051301 | ISO | PLAZA Integrative Orthology | cell division | AT5G55920 |
GO:0090069 | ISO | PLAZA Integrative Orthology | regulation of ribosome biogenesis | AT5G55920 |
GO:0009965 | ISO | PLAZA Integrative Orthology | leaf morphogenesis | AT5G55920 |
GO:0042127 | ISO | PLAZA Integrative Orthology | regulation of cell population proliferation | AT5G55920 |
GO:0010015 | ISO | PLAZA Integrative Orthology | root morphogenesis | AT5G55920 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0008757 | IEA | InterPro | S-adenosylmethionine-dependent methyltransferase activity | |
GO:0008168 | IEA | InterPro | methyltransferase activity |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G55920 |
GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G26600 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR011023 | Nop2p |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
IPR023267 | RNA (C5-cytosine) methyltransferase |
IPR001678 | SAM-dependent methyltransferase RsmB/NOP2-type |
IPR023273 | RNA (C5-cytosine) methyltransferase, NOP2 |
IPR031341 | Ribosomal RNA small subunit methyltransferase F, N-terminal |
Mapman id | Description |
---|---|
17.1.2.2.3.6 | Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.60S ribosomal subunit cytoplasmic maturation.maturation factor (OLI2) |