Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu025366.1 Olea europaea HOM05D000688 ORTHO05D004737 5.0e-69 264.2 126 100.0
Oeu019307.1 Olea europaea HOM05D000688 ORTHO05D004737 1.5e-36 156.4 93 81.7
MSTRG.1633 Avicennia marina HOM05D000688 ORTHO05D004737 1.2e-27 126.7 93 60.2
Manes.03G009000 Manihot esculenta HOM05D000688 ORTHO05D004737 3.6e-27 125.2 93 61.3
FAN28G1036 Fragaria x ananassa HOM05D000688 ORTHO05D004737 1.8e-26 122.9 100 57.0
Ciclev10018562m.g Citrus clementina HOM05D000688 ORTHO05D004737 4.0e-26 121.7 90 62.2
Migut.E01463 Erythranthe guttata HOM05D000688 ORTHO05D004737 4.0e-26 121.7 91 60.4
FAN23G1159 Fragaria x ananassa HOM05D000688 ORTHO05D004737 4.0e-26 121.7 100 56.0
FAN26G2550 Fragaria x ananassa HOM05D000688 ORTHO05D004737 4.0e-26 121.7 100 56.0
FAN26G3128 Fragaria x ananassa HOM05D000688 ORTHO05D004737 4.0e-26 121.7 100 56.0
Hund19557 Selenicereus undatus HOM05D000688 ORTHO05D004737 6.8e-26 120.9 97 55.7
Actinidia10520 Actinidia chinensis HOM05D000688 ORTHO05D004737 8.9e-26 120.6 88 59.1
Dinv03974 Davidia involucrata HOM05D000688 ORTHO05D004737 1.2e-25 120.2 88 59.1
RcHm_v2.0_Chr2g0092681 Rosa chinensis HOM05D000688 ORTHO05D004737 1.5e-25 119.8 97 55.7
EL10Ac2g04112 Beta vulgaris HOM05D000688 ORTHO05D004737 2.0e-25 119.4 97 53.6
Dinv40966 Davidia involucrata HOM05D000688 ORTHO05D004737 2.0e-25 119.4 88 58.0
SHI21063 Sapria himalayana HOM05D000688 ORTHO05D004737 4.4e-25 118.2 90 61.1
Sc09g0010620 Simmondsia chinensis HOM05D000688 ORTHO05D004737 4.4e-25 118.2 93 57.0
Lj8A737G24 Lonicera japonica HOM05D000688 ORTHO05D004737 5.8e-25 117.9 88 59.1
Potri.018G019100 Populus trichocarpa HOM05D000688 ORTHO05D004737 5.8e-25 117.9 88 59.1
Manes.16G129400 Manihot esculenta HOM05D000688 ORTHO05D004737 7.6e-25 117.5 93 57.0
Hma1.2p1_2081F.1_g313530 Hydrangea macrophylla HOM05D000688 ORTHO05D004737 9.9e-25 117.1 88 59.1
Ah.16g104830 Amaranthus hybridus HOM05D000688 ORTHO05D004737 1.3e-24 116.7 80 61.2
AUR62009365 Chenopodium quinoa HOM05D000688 ORTHO05D004737 1.3e-24 116.7 97 50.5
AUR62023046 Chenopodium quinoa HOM05D000688 ORTHO05D004737 1.3e-24 116.7 97 50.5
DCAR_009948 Daucus carota HOM05D000688 ORTHO05D004737 1.7e-24 116.3 91 58.2
AUR62020625 Chenopodium quinoa HOM05D000688 ORTHO05D004737 2.2e-24 115.9 97 51.5
FvH4_1g06870 Fragaria vesca HOM05D000688 ORTHO05D004737 2.2e-24 115.9 100 54.0
FAN19G0885 Fragaria x ananassa HOM05D000688 ORTHO05D004737 2.2e-24 115.9 100 54.0
SalBow6G4737 Salvia bowleyana HOM05D000688 ORTHO05D004737 2.9e-24 115.5 98 55.1
CSS0050165 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D004737 3.8e-24 115.2 88 55.7
AUR62038757 Chenopodium quinoa HOM05D000688 ORTHO05D004737 4.9e-24 114.8 97 51.5
vmacro13779 Vaccinium macrocarpon HOM05D000688 ORTHO05D004737 4.9e-24 114.8 91 56.0
CSS0012771 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D004737 8.4e-24 114.0 88 55.7
CSS0012935 Camellia sinensis var. sinensis HOM05D000688 ORTHO05D004737 8.4e-24 114.0 88 55.7
DCAR_022858 Daucus carota HOM05D000688 ORTHO05D004737 8.4e-24 114.0 88 58.0
vmacro11243 Vaccinium macrocarpon HOM05D000688 ORTHO05D004737 1.1e-23 113.6 91 54.9
GSVIVG01035963001 Vitis vinifera HOM05D000688 ORTHO05D004737 1.1e-23 113.6 97 53.6
Eucgr.C00069 Eucalyptus grandis HOM05D000688 ORTHO05D004737 1.4e-23 113.2 92 53.3
SalBow6G0619 Salvia bowleyana HOM05D000688 ORTHO05D004737 1.4e-23 113.2 98 55.1
THA.LOC104812243 Tarenaya hassleriana HOM05D000688 ORTHO05D004737 1.4e-23 113.2 92 59.8
CANSAT25G1723 Cannabis sativa HOM05D000688 ORTHO05D004737 1.9e-23 112.8 88 54.5
TWI63G0903 Tripterygium wilfordii HOM05D000688 ORTHO05D004737 1.9e-23 112.8 88 56.8
Atru.chr2.841 Acer truncatum HOM05D000688 ORTHO05D004737 2.4e-23 112.5 93 52.7
arahy.Tifrunner.gnm1.ann1.35ZHP3 Arachis hypogaea HOM05D000688 ORTHO05D004737 4.2e-23 111.7 86 59.3
arahy.Tifrunner.gnm1.ann1.QT4Q57 Arachis hypogaea HOM05D000688 ORTHO05D004737 4.2e-23 111.7 86 59.3
Sed0003356 Sechium edule HOM05D000688 ORTHO05D004737 7.1e-23 110.9 88 55.7
Sopen08g024590 Solanum pennellii HOM05D000688 ORTHO05D004737 7.1e-23 110.9 95 52.6
Nitab4.5_0001033g0090 Nicotiana tabacum HOM05D000688 ORTHO05D004737 9.3e-23 110.5 92 54.3
QL02p018902 Quercus lobata HOM05D000688 ORTHO05D004737 9.3e-23 110.5 91 53.8
Thecc.09G016000 Theobroma cacao HOM05D000688 ORTHO05D004737 9.3e-23 110.5 93 53.8
CAN.G352.64 Capsicum annuum HOM05D000688 ORTHO05D004737 1.6e-22 109.8 92 54.3
Ca_15777_v3 Cicer arietinum L. HOM05D000688 ORTHO05D004737 1.6e-22 109.8 93 53.8
MD15G1040100 Malus domestica HOM05D000688 ORTHO05D004737 1.6e-22 109.8 97 51.5
Prupe.1G393500 Prunus persica HOM05D000688 ORTHO05D004737 1.6e-22 109.8 97 51.5
TAR624G0960 Trochodendron aralioides HOM05D000688 ORTHO05D004737 1.6e-22 109.8 91 50.5
COL.COLO4_35449 Corchorus olitorius HOM05D000688 ORTHO05D004737 2.1e-22 109.4 88 54.5
MD08G1057300 Malus domestica HOM05D000688 ORTHO05D004737 2.7e-22 109.0 97 50.5
PGSC0003DMG400030880 Solanum tuberosum HOM05D000688 ORTHO05D004737 2.7e-22 109.0 91 51.6
SGA_v2.0_scaffold4G02180 Striga asiatica HOM05D000688 ORTHO05D004737 2.7e-22 109.0 95 55.8
COL.COLO4_18947 Corchorus olitorius HOM05D000688 ORTHO05D004737 3.5e-22 108.6 88 55.7
Gohir.A07G032700 Gossypium hirsutum HOM05D000688 ORTHO05D004737 4.6e-22 108.2 88 54.5
Gohir.D07G036000 Gossypium hirsutum HOM05D000688 ORTHO05D004737 4.6e-22 108.2 88 54.5
Gorai.001G037900 Gossypium raimondii HOM05D000688 ORTHO05D004737 4.6e-22 108.2 88 54.5
Lj7C733G5 Lonicera japonica HOM05D000688 ORTHO05D004737 4.6e-22 108.2 91 57.1
CAN.G1269.4 Capsicum annuum HOM05D000688 ORTHO05D004737 6.0e-22 107.8 92 52.2
Sopen03g030070 Solanum pennellii HOM05D000688 ORTHO05D004737 6.0e-22 107.8 92 53.3
Lalb_Chr23g0268231 Lupinus albus HOM05D000688 ORTHO05D004737 7.8e-22 107.5 86 59.3
Solyc08g075940.4 Solanum lycopersicum HOM05D000688 ORTHO05D004737 7.8e-22 107.5 92 52.2
ClCG05G016300 Citrullus lanatus HOM05D000688 ORTHO05D004737 1.0e-21 107.1 92 55.4
Cc08_g05510 Coffea canephora HOM05D000688 ORTHO05D004737 1.0e-21 107.1 91 56.0
Lj1g0018077 Lotus japonicus HOM05D000688 ORTHO05D004737 1.0e-21 107.1 88 53.4
Solyc03g110880.4 Solanum lycopersicum HOM05D000688 ORTHO05D004737 1.0e-21 107.1 92 53.3
MELO3C016960.2 Cucumis melo HOM05D000688 ORTHO05D004737 1.3e-21 106.7 95 51.6
Medtr0189s0050 Medicago truncatula HOM05D000688 ORTHO05D004737 1.3e-21 106.7 88 55.7
CsaV3_4G036560 Cucumis sativus L. HOM05D000688 ORTHO05D004737 1.7e-21 106.3 95 51.6
Lalb_Chr08g0244431 Lupinus albus HOM05D000688 ORTHO05D004737 1.7e-21 106.3 91 56.0
SGA_v2.0_scaffold169G38607 Striga asiatica HOM05D000688 ORTHO05D004737 1.7e-21 106.3 87 59.8
TPR.G1854 Trifolium pratense HOM05D000688 ORTHO05D004737 1.7e-21 106.3 88 54.5
Cc01_g06880 Coffea canephora HOM05D000688 ORTHO05D004737 2.3e-21 105.9 92 56.5
Duzib168G0339 Durio zibethinus HOM05D000688 ORTHO05D004737 3.0e-21 105.5 93 50.5
PSO017G0269 Papaver somniferum HOM05D000688 ORTHO05D004737 3.0e-21 105.5 86 50.0
PSO478G0475 Papaver somniferum HOM05D000688 ORTHO05D004737 3.0e-21 105.5 86 50.0
Psat5g032960 Pisum sativum HOM05D000688 ORTHO05D004737 3.0e-21 105.5 93 52.7
Medtr3g105990 Medicago truncatula HOM05D000688 ORTHO05D004737 6.6e-21 104.4 88 55.7
Lsat_1_v5_gn_2_114740 Lactuca sativa HOM05D000688 ORTHO05D004737 8.7e-21 104.0 88 55.7
Glyma.04G061000 Glycine max HOM05D000688 ORTHO05D004737 1.5e-20 103.2 86 57.0
MBI05_g00401_MAGBIO Magnolia biondii HOM05D000688 ORTHO05D004737 1.5e-20 103.2 91 52.7
Nn1g00540 Nelumbo nucifera HOM05D000688 ORTHO05D004737 1.9e-20 102.8 99 45.5
RcHm_v2.0_Chr5g0042251 Rosa chinensis HOM05D000688 ORTHO05D004737 1.9e-20 102.8 93 54.8
DCAR_003109 Daucus carota HOM05D000688 ORTHO05D004737 3.3e-20 102.1 94 53.2
Hma1.2p1_2362F.1_g320630 Hydrangea macrophylla HOM05D000688 ORTHO05D004737 3.3e-20 102.1 71 60.6
Glyma.06G061600 Glycine max HOM05D000688 ORTHO05D004737 4.3e-20 101.7 86 57.0
HanXRQChr11g0320381 Helianthus annuus HOM05D000688 ORTHO05D004737 4.3e-20 101.7 88 50.0
PGR142G3000 Punica granatum HOM05D000688 ORTHO05D004737 4.3e-20 101.7 97 47.4
Peaxi162Scf00408g00711 Petunia axillaris HOM05D000688 ORTHO05D004737 9.6e-20 100.5 95 46.3
Rhsim02G0213200 Rhododendron simsii HOM05D000688 ORTHO05D004737 1.3e-19 100.1 71 57.7
VMungo1309G2219 Vigna mungo HOM05D000688 ORTHO05D004737 1.3e-19 100.1 86 57.0
Phvul.009G087100 Phaseolus vulgaris HOM05D000688 ORTHO05D004737 2.1e-19 99.4 86 55.8
COL.COLO4_29107 Corchorus olitorius HOM05D000688 ORTHO05D004737 6.2e-19 97.8 74 56.8
Aqoxy5G02323 Aquilegia oxysepala HOM05D000688 ORTHO05D004737 8.1e-19 97.4 95 50.5
CARHR094240 Cardamine hirsuta HOM05D000688 ORTHO05D004737 8.1e-19 97.4 98 49.0
ECA232G0687 Erigeron canadensis HOM05D000688 ORTHO05D004737 8.1e-19 97.4 88 50.0
PGR142G2531 Punica granatum HOM05D000688 ORTHO05D004737 1.4e-18 96.7 91 48.4
Aa31LG8G4940 Aethionema arabicum HOM05D000688 ORTHO05D004737 1.8e-18 96.3 97 53.6
AL3G31250 Arabidopsis lyrata HOM05D000688 ORTHO05D004737 1.8e-18 96.3 98 48.0
AL3G38680 Arabidopsis lyrata HOM05D000688 ORTHO05D004737 1.8e-18 96.3 98 49.0
Lsat_1_v5_gn_9_69261 Lactuca sativa HOM05D000688 ORTHO05D004737 1.8e-18 96.3 88 46.6
HanXRQChr01g0011481 Helianthus annuus HOM05D000688 ORTHO05D004737 2.4e-18 95.9 70 60.0
AT3G23780 Arabidopsis thaliana HOM05D000688 ORTHO05D004737 4.0e-18 95.1 98 48.0
Sp3g16210 Schrenkiella parvula HOM05D000688 ORTHO05D004737 5.3e-18 94.7 100 48.0
A05p31700 Brassica napus HOM05D000688 ORTHO05D004737 6.9e-18 94.4 100 47.0
BraA05t22003Z Brassica rapa HOM05D000688 ORTHO05D004737 6.9e-18 94.4 100 47.0
HanXRQChr15g0484591 Helianthus annuus HOM05D000688 ORTHO05D004737 6.9e-18 94.4 95 43.2
ECA238G1344 Erigeron canadensis HOM05D000688 ORTHO05D004737 1.2e-17 93.6 94 47.9
AT3G18090 Arabidopsis thaliana HOM05D000688 ORTHO05D004737 1.5e-17 93.2 112 42.9
C05p48100 Brassica napus HOM05D000688 ORTHO05D004737 2.0e-17 92.8 100 47.0
BolC5t33520H Brassica oleracea HOM05D000688 ORTHO05D004737 3.4e-17 92.0 95 48.4
BolC5t33551H Brassica oleracea HOM05D000688 ORTHO05D004737 3.4e-17 92.0 95 48.4
Thhalv10019931m.g Eutrema salsugineum HOM05D000688 ORTHO05D004737 4.4e-17 91.7 103 45.6
HPP92_002312 Vanilla planifolia HOM05D000688 ORTHO05D004737 1.3e-16 90.1 77 53.2
CDE08G0441 Ceratophyllum demersum HOM05D000688 ORTHO05D004737 2.9e-16 89.0 89 47.2
Haze_21420 Corylus avellana HOM05D000688 ORTHO05D004737 4.9e-16 88.2 70 50.0
ATR0564G243 Amborella trichopoda HOM05D000688 ORTHO05D004737 8.4e-16 87.4 98 42.9
BolC5t33527H Brassica oleracea HOM05D000688 ORTHO05D004737 1.1e-15 87.0 82 51.2
Zm00001eb415030 Zea mays HOM05D000688 ORTHO05D004737 5.4e-15 84.7 92 44.6
Os04g0641000 Oryza sativa ssp. japonica HOM05D000688 ORTHO05D004737 1.6e-14 83.2 88 47.7
Zm00001eb068960 Zea mays HOM05D000688 ORTHO05D004737 3.0e-13 79.0 87 47.1
Zm00001eb431870 Zea mays HOM05D000688 ORTHO05D004737 1.1e-12 77.0 95 43.2
SGA_v2.0_scaffold205G41799 Striga asiatica HOM05D000688 ORTHO05D051376 2.1e-11 72.8 55 61.8
CiPaw.07G230000 Carya illinoinensis HOM05D000688 ORTHO05D004737 5.3e-10 68.2 47 66.0
SEGI_06643 Sequoiadendron giganteum HOM05D000688 ORTHO05D004737 4.5e-09 65.1 102 37.3
SGA_v2.0_scaffold108G30932 Striga asiatica HOM05D000688 ORTHO05D051376 1.3e-08 63.5 50 60.0
unitig_8.g3065 Utricularia gibba HOM05D000688 ORTHO05D004737 3.8e-08 62.0 54 48.1
Mapoly0058s0108 Marchantia polymorpha HOM05D000688 ORTHO05D004737 4.9e-08 61.6 112 37.5
RcHm_v2.0_Chr5g0042281 Rosa chinensis HOM05D000688 ORTHO05D004737 8.4e-08 60.8 32 84.4
Pp3c4_16140 Physcomitrium patens HOM05D000688 ORTHO05D004737 5.5e-07 58.2 72 43.1
AagrBONN_evm.TU.Sc2ySwM_228.1461 Anthoceros agrestis HOM05D000688 ORTHO05D004737 1.2e-06 57.0 78 46.2


User provided reference genes

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