Gene: Zm00001eb415030

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb415030
  • Transcript Identifier Zm00001eb415030_T001
  • Gene Type Coding gene
  • Location 10 : 74223320-74235459 : negative

Gene Family Information

  • ID HOM05D000688
  • #Genes/#Species 832/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb415030_T001
  • pid Zm00001eb415030_P001
  • uniprot A0A1D6IZI0
  • uniprot A0A3L6GBP0
  • uniprot K7TLH8
  • V4_identifier Zm00001d024470

Descriptions

  • Description Zm00001e040144
  • Description DNA-directed RNA polymerase subunit beta
  • Description DNA-directed RNA polymerase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT3G18090
GO:0050776
ISO
PLAZA Integrative Orthologyregulation of immune response AT3G23780
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G23780
GO:0030422
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in RNA interference AT3G23780
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT3G23780
GO:0006306
ISO
PLAZA Integrative OrthologyDNA methylation AT3G23780
GO:0035194
ISO
PLAZA Integrative Orthologypost-transcriptional gene silencing by RNA AT3G23780
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G23780
GO:0003899
IBA
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0032549
IEA
GOA Databaseribonucleoside binding
GO:0032549
IEA
InterProribonucleoside binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030880
ISO
PLAZA Integrative OrthologyRNA polymerase complex AT3G23780
GO:0000792
ISO
PLAZA Integrative Orthologyheterochromatin AT3G23780
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G23780
GO:0000418
ISO
PLAZA Integrative OrthologyRNA polymerase IV complex AT3G23780
GO:0000419
ISO
PLAZA Integrative OrthologyRNA polymerase V complex AT3G23780
GO:0005665
IBA
GOA DatabaseRNA polymerase II, core complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007641 RNA polymerase Rpb2, domain 7
IPR007644 RNA polymerase, beta subunit, protrusion
IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
IPR015712 DNA-directed RNA polymerase, subunit 2
IPR007645 RNA polymerase Rpb2, domain 3
IPR007642 RNA polymerase Rpb2, domain 2
IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
IPR014724 RNA polymerase Rpb2, OB-fold
IPR037034 RNA polymerase Rpb2, domain 2 superfamily
IPR007646 RNA polymerase Rpb2, domain 4
Mapman id Description
35.1 not assigned.annotated