Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009484.1 Olea europaea HOM05D003093 ORTHO05D004301 5.0e-205 717.6 377 100.0
Oeu039037.3 Olea europaea HOM05D003093 ORTHO05D004301 9.8e-161 570.5 374 81.8
Lj1A929G70 Lonicera japonica HOM05D003093 ORTHO05D004301 1.4e-138 496.9 367 73.3
Migut.F00813 Erythranthe guttata HOM05D003093 ORTHO05D004301 1.7e-136 490.0 378 70.9
SGA_v2.0_scaffold2G01039 Striga asiatica HOM05D003093 ORTHO05D004301 2.1e-134 483.0 372 71.0
SGA_v2.0_scaffold221G42698 Striga asiatica HOM05D003093 ORTHO05D004301 2.7e-134 482.6 373 70.2
Hma1.2p1_0207F.1_g087910 Hydrangea macrophylla HOM05D003093 ORTHO05D004301 1.1e-132 477.2 357 72.0
Oeu009483.1 Olea europaea HOM05D003093 ORTHO05D004301 2.5e-132 476.1 258 98.8
PGSC0003DMG400002376 Solanum tuberosum HOM05D003093 ORTHO05D004301 8.9e-130 467.6 376 68.9
Dinv31391 Davidia involucrata HOM05D003093 ORTHO05D004301 1.1e-127 460.7 370 70.3
Peaxi162Scf00015g02612 Petunia axillaris HOM05D003093 ORTHO05D004301 1.9e-127 459.9 358 71.8
GSVIVG01032624001 Vitis vinifera HOM05D003093 ORTHO05D004301 7.1e-127 458.0 374 70.3
Sopen06g008290 Solanum pennellii HOM05D003093 ORTHO05D004301 1.6e-126 456.8 376 67.6
TAR623G1133 Trochodendron aralioides HOM05D003093 ORTHO05D004301 1.0e-125 454.1 373 69.4
Ah.10g033320 Amaranthus hybridus HOM05D003093 ORTHO05D004301 9.6e-124 447.6 366 70.8
CAN.G546.16 Capsicum annuum HOM05D003093 ORTHO05D004301 1.1e-122 444.1 354 69.8
Lsat_1_v5_gn_3_65860 Lactuca sativa HOM05D003093 ORTHO05D004301 1.1e-122 444.1 345 70.1
Rhsim03G0125400 Rhododendron simsii HOM05D003093 ORTHO05D004301 1.1e-122 444.1 356 68.8
HanXRQChr15g0482981 Helianthus annuus HOM05D003093 ORTHO05D004301 1.4e-122 443.7 345 68.7
QL08p057653 Quercus lobata HOM05D003093 ORTHO05D004301 6.8e-122 441.4 375 67.5
Actinidia38222 Actinidia chinensis HOM05D003093 ORTHO05D004301 8.9e-122 441.0 364 67.6
unitig_32.g10676 Utricularia gibba HOM05D003093 ORTHO05D004301 1.7e-120 436.8 369 67.2
Cfa001556 Carpinus fangiana HOM05D003093 ORTHO05D004301 2.2e-120 436.4 367 67.3
Cpa.g.sc1.306 Carica papaya HOM05D003093 ORTHO05D004301 3.8e-120 435.6 366 68.0
TWI38G0009 Tripterygium wilfordii HOM05D003093 ORTHO05D004301 1.4e-119 433.7 353 69.1
Haze_16975 Corylus avellana HOM05D003093 ORTHO05D004301 1.2e-118 430.6 367 66.8
ECA233G1939 Erigeron canadensis HOM05D003093 ORTHO05D004301 2.7e-118 429.5 345 67.8
EL10Ac2g03490 Beta vulgaris HOM05D003093 ORTHO05D004301 1.3e-117 427.2 352 68.8
Sc06g0001860 Simmondsia chinensis HOM05D003093 ORTHO05D004301 6.6e-117 424.9 352 67.6
Hund22429 Selenicereus undatus HOM05D003093 ORTHO05D004301 3.3e-116 422.5 370 65.1
vmacro07110 Vaccinium macrocarpon HOM05D003093 ORTHO05D004301 4.3e-116 422.2 371 64.2
Eucgr.G02772 Eucalyptus grandis HOM05D003093 ORTHO05D004301 9.6e-116 421.0 365 65.8
AUR62025537 Chenopodium quinoa HOM05D003093 ORTHO05D004301 2.1e-115 419.9 362 67.7
Aqoxy1G01978 Aquilegia oxysepala HOM05D003093 ORTHO05D004301 4.8e-115 418.7 377 64.5
Solyc06g036580.4 Solanum lycopersicum HOM05D003093 ORTHO05D004301 1.4e-114 417.2 331 69.8
CANSAT78G1625 Cannabis sativa HOM05D003093 ORTHO05D004301 5.3e-114 415.2 369 64.8
CsaV3_5G006530 Cucumis sativus L. HOM05D003093 ORTHO05D004301 9.0e-114 414.5 367 65.1
ClCG02G013660 Citrullus lanatus HOM05D003093 ORTHO05D004301 2.0e-113 413.3 365 63.8
Sopen05g033340 Solanum pennellii HOM05D003093 ORTHO05D004301 1.3e-112 410.6 352 64.8
PGSC0003DMG400023507 Solanum tuberosum HOM05D003093 ORTHO05D004301 3.8e-112 409.1 352 64.8
MELO3C023809.2 Cucumis melo HOM05D003093 ORTHO05D004301 6.4e-112 408.3 367 64.3
SalBow3G0936 Salvia bowleyana HOM05D003093 ORTHO05D004301 1.1e-111 407.5 372 61.6
HanXRQChr16g0532861 Helianthus annuus HOM05D003093 ORTHO05D004301 1.4e-111 407.1 354 65.3
PSO541G5925 Papaver somniferum HOM05D003093 ORTHO05D004301 1.9e-111 406.8 352 66.8
MBI05_g32633_MAGBIO Magnolia biondii HOM05D003093 ORTHO05D004301 2.4e-111 406.4 367 65.4
Cc02_g08600 Coffea canephora HOM05D003093 ORTHO05D004301 3.2e-111 406.0 288 74.3
PSO675G6375 Papaver somniferum HOM05D003093 ORTHO05D004301 2.1e-110 403.3 351 66.1
Glyma.20G241900 Glycine max HOM05D003093 ORTHO05D004301 6.0e-110 401.7 370 60.8
THA.LOC104827309 Tarenaya hassleriana HOM05D003093 ORTHO05D004301 1.3e-109 400.6 371 63.1
CDE10G0729 Ceratophyllum demersum HOM05D003093 ORTHO05D004301 3.9e-109 399.1 366 60.9
Duzib114G0430 Durio zibethinus HOM05D003093 ORTHO05D004301 3.9e-109 399.1 352 67.3
Gorai.011G244700 Gossypium raimondii HOM05D003093 ORTHO05D004301 1.9e-108 396.7 351 64.1
PGR142G0268 Punica granatum HOM05D003093 ORTHO05D004301 1.9e-108 396.7 357 63.9
TPR.G10418 Trifolium pratense HOM05D003093 ORTHO05D004301 2.5e-108 396.4 366 62.0
Duzib114G0987 Durio zibethinus HOM05D003093 ORTHO05D004301 3.3e-108 396.0 352 67.0
Phvul.007G008300 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 5.6e-108 395.2 368 62.0
Potri.010G213300 Populus trichocarpa HOM05D003093 ORTHO05D004301 9.6e-108 394.4 352 63.6
Glyma.01G229700 Glycine max HOM05D003093 ORTHO05D004301 1.3e-107 394.0 347 64.3
Ciclev10030694m.g Citrus clementina HOM05D003093 ORTHO05D004301 6.2e-107 391.7 349 64.8
Sabra10G0165100 Salix brachista HOM05D003093 ORTHO05D004301 8.1e-107 391.3 351 62.7
AUR62042671 Chenopodium quinoa HOM05D003093 ORTHO05D004301 1.1e-106 391.0 364 63.2
Sed0012201 Sechium edule HOM05D003093 ORTHO05D004301 1.1e-106 391.0 367 61.9
CSS0040311 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 1.4e-106 390.6 353 64.6
CSS0050146 Camellia sinensis var. sinensis HOM05D003093 ORTHO05D004301 1.4e-106 390.6 353 64.6
Glyma.11G012500 Glycine max HOM05D003093 ORTHO05D004301 2.4e-106 389.8 376 59.8
Ca_11321_v3 Cicer arietinum L. HOM05D003093 ORTHO05D004301 4.0e-106 389.0 370 61.1
Lj5g0014436 Lotus japonicus HOM05D003093 ORTHO05D004301 4.0e-106 389.0 369 61.5
Thecc.10G062100 Theobroma cacao HOM05D003093 ORTHO05D004301 6.9e-106 388.3 352 65.9
Medtr1g115920 Medicago truncatula HOM05D003093 ORTHO05D004301 1.5e-105 387.1 374 61.5
Gohir.A10G209800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 2.0e-105 386.7 351 65.2
Sabra08G0034200 Salix brachista HOM05D003093 ORTHO05D004301 2.0e-105 386.7 351 61.5
VMungo0720G2412 Vigna mungo HOM05D003093 ORTHO05D004301 4.5e-105 385.6 375 59.7
Duzib128G1511 Durio zibethinus HOM05D003093 ORTHO05D004301 1.3e-104 384.0 355 65.4
MD01G1117500 Malus domestica HOM05D003093 ORTHO05D004301 2.2e-104 383.3 365 60.5
MD07G1185000 Malus domestica HOM05D003093 ORTHO05D004301 2.2e-104 383.3 364 59.6
Lalb_Chr02g0143891 Lupinus albus HOM05D003093 ORTHO05D004301 4.9e-104 382.1 373 59.5
Potri.008G048000 Populus trichocarpa HOM05D003093 ORTHO05D004301 6.4e-104 381.7 350 61.1
Gorai.010G203000 Gossypium raimondii HOM05D003093 ORTHO05D004301 5.5e-103 378.6 355 63.7
Nn2g10548 Nelumbo nucifera HOM05D003093 ORTHO05D004301 5.5e-103 378.6 325 67.4
Prupe.2G224900 Prunus persica HOM05D003093 ORTHO05D004301 6.0e-102 375.2 325 64.6
ATR0580G275 Amborella trichopoda HOM05D003093 ORTHO05D004301 1.3e-101 374.0 367 60.8
CDE10G0582 Ceratophyllum demersum HOM05D003093 ORTHO05D004301 1.1e-100 370.9 321 63.6
FAN06G3924 Fragaria x ananassa HOM05D003093 ORTHO05D004301 1.6e-99 367.1 351 58.7
VMungo0720G2126 Vigna mungo HOM05D003093 ORTHO05D004301 1.6e-99 367.1 375 57.6
CiPaw.01G280100 Carya illinoinensis HOM05D003093 ORTHO05D004301 2.1e-99 366.7 293 67.9
FAN06G1239 Fragaria x ananassa HOM05D003093 ORTHO05D004301 8.1e-99 364.8 351 58.4
FAN03G1537 Fragaria x ananassa HOM05D003093 ORTHO05D004301 1.4e-98 364.0 351 58.4
FAN10G3079 Fragaria x ananassa HOM05D003093 ORTHO05D004301 1.8e-98 363.6 351 58.4
arahy.Tifrunner.gnm1.ann1.YKFK84 Arachis hypogaea HOM05D003093 ORTHO05D004301 2.4e-98 363.2 349 60.2
Phvul.002G037600 Phaseolus vulgaris HOM05D003093 ORTHO05D004301 4.0e-98 362.5 375 56.8
SHI28152 Sapria himalayana HOM05D003093 ORTHO05D000168 4.0e-98 362.5 345 61.4
arahy.Tifrunner.gnm1.ann1.59ZZV8 Arachis hypogaea HOM05D003093 ORTHO05D004301 1.2e-97 360.9 355 59.4
COL.COLO4_10868 Corchorus olitorius HOM05D003093 ORTHO05D004301 1.5e-97 360.5 358 62.3
FvH4_7g20820 Fragaria vesca HOM05D003093 ORTHO05D004301 2.6e-97 359.8 351 57.8
SEGI_36215 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 5.8e-97 358.6 362 59.4
Gohir.D10G218100 Gossypium hirsutum HOM05D003093 ORTHO05D004301 4.9e-96 355.5 351 60.4
FAN01G1115 Fragaria x ananassa HOM05D003093 ORTHO05D004301 8.4e-96 354.8 349 57.6
SalBow8G1202 Salvia bowleyana HOM05D003093 ORTHO05D004301 1.4e-95 354.0 319 62.1
Gohir.D06G173600 Gossypium hirsutum HOM05D003093 ORTHO05D004301 2.1e-94 350.1 296 66.6
AL1G41570 Arabidopsis lyrata HOM05D003093 ORTHO05D004301 3.5e-94 349.4 355 60.0
CARHR027510 Cardamine hirsuta HOM05D003093 ORTHO05D004301 7.9e-94 348.2 378 56.6
Carub.0001s2649 Capsella rubella HOM05D003093 ORTHO05D004301 1.3e-93 347.4 365 58.9
Sp1g24240 Schrenkiella parvula HOM05D003093 ORTHO05D004301 3.0e-93 346.3 368 58.2
AT1G28060 Arabidopsis thaliana HOM05D003093 ORTHO05D004301 8.7e-93 344.7 371 56.9
Gohir.A06G177800 Gossypium hirsutum HOM05D003093 ORTHO05D004301 1.1e-92 344.4 292 66.1
TPR.G11535 Trifolium pratense HOM05D003093 ORTHO05D004301 1.1e-92 344.4 347 58.8
unitig_88.g27763 Utricularia gibba HOM05D003093 ORTHO05D004301 1.9e-92 343.6 372 56.2
SEGI_10080 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 3.3e-92 342.8 325 62.2
RcHm_v2.0_Chr1g0365041 Rosa chinensis HOM05D003093 ORTHO05D004301 2.8e-91 339.7 324 59.0
Manes.10G038800 Manihot esculenta HOM05D003093 ORTHO05D004301 3.7e-91 339.3 295 64.1
Manes.07G106800 Manihot esculenta HOM05D003093 ORTHO05D004301 8.2e-91 338.2 293 63.8
A09p38030 Brassica napus HOM05D003093 ORTHO05D004301 6.9e-90 335.1 375 56.0
BraA09t39313Z Brassica rapa HOM05D003093 ORTHO05D004301 6.9e-90 335.1 375 56.0
BolC5t31397H Brassica oleracea HOM05D003093 ORTHO05D004301 1.5e-89 334.0 375 56.3
BcaC05g26809 Brassica carinata HOM05D003093 ORTHO05D004301 2.0e-89 333.6 380 55.0
Aa31sc146G40 Aethionema arabicum HOM05D003093 ORTHO05D004301 4.5e-89 332.4 366 55.2
BcaC05g26621 Brassica carinata HOM05D003093 ORTHO05D004301 5.9e-89 332.0 375 56.3
C05p26730 Brassica napus HOM05D003093 ORTHO05D004301 5.9e-89 332.0 375 56.3
Solyc05g054880.3 Solanum lycopersicum HOM05D003093 ORTHO05D004301 1.4e-87 327.4 264 66.7
Lalb_Chr21g0307191 Lupinus albus HOM05D003093 ORTHO05D004301 2.1e-86 323.6 291 62.2
HPP92_019592 Vanilla planifolia HOM05D003093 ORTHO05D004301 2.2e-80 303.5 367 55.3
Thhalv10006834m.g Eutrema salsugineum HOM05D003093 ORTHO05D004301 6.5e-80 302.0 376 51.9
SEGI_11595 Sequoiadendron giganteum HOM05D003093 ORTHO05D004301 1.1e-79 301.2 302 58.6
CiPaw.02G178700 Carya illinoinensis HOM05D003093 ORTHO05D004301 2.2e-75 287.0 184 80.4
ECA234G2610 Erigeron canadensis HOM05D003093 ORTHO05D004301 4.1e-74 282.7 319 54.2
A08p25940 Brassica napus HOM05D003093 ORTHO05D004301 9.1e-74 281.6 371 49.3
Pp3c14_26820 Physcomitrium patens HOM05D003093 ORTHO05D004301 1.0e-72 278.1 344 53.2
Sed0009358 Sechium edule HOM05D003093 ORTHO05D004301 1.0e-72 278.1 183 76.0
Rhsim09G0156000 Rhododendron simsii HOM05D003093 ORTHO05D004301 2.2e-72 276.9 351 51.3
AagrBONN_evm.TU.Sc2ySwM_117.140 Anthoceros agrestis HOM05D003093 ORTHO05D004301 1.1e-71 274.6 307 53.4
Zm00001eb204030 Zea mays HOM05D003093 ORTHO05D004301 5.5e-71 272.3 314 53.2
TPR.G27039 Trifolium pratense HOM05D003093 ORTHO05D004301 7.2e-71 271.9 345 49.6
BolC3t19719H Brassica oleracea HOM05D003093 ORTHO05D004301 2.3e-69 266.9 375 46.9
C03p74710 Brassica napus HOM05D003093 ORTHO05D004301 4.4e-68 262.7 372 46.0
DCAR_027695 Daucus carota HOM05D003093 ORTHO05D004301 2.2e-67 260.4 249 63.1
Os09g0249600 Oryza sativa ssp. japonica HOM05D003093 ORTHO05D004301 8.2e-67 258.5 195 68.2
FvH4_2g04410 Fragaria vesca HOM05D003093 ORTHO05D004301 4.1e-66 256.1 350 46.3
Psat6g163840 Pisum sativum HOM05D003093 ORTHO05D004301 9.4e-63 245.0 179 72.1
Psat6g240760 Pisum sativum HOM05D003093 ORTHO05D004301 1.6e-62 244.2 372 45.4
Mapoly0014s0207 Marchantia polymorpha HOM05D003093 ORTHO05D004301 8.8e-61 238.4 380 44.2
TPR.G27107 Trifolium pratense HOM05D003093 ORTHO05D004301 4.8e-59 232.6 328 46.3
Medtr4g094355 Medicago truncatula HOM05D003093 ORTHO05D004301 1.1e-58 231.5 155 75.5
Lsat_1_v5_gn_6_55440 Lactuca sativa HOM05D003093 ORTHO05D004301 2.7e-57 226.9 322 46.6
Zm00001eb238080 Zea mays HOM05D003093 ORTHO05D004301 1.3e-56 224.6 184 65.2
CBR_g41418 Chara braunii HOM05D003093 ORTHO05D004301 2.7e-54 216.9 197 55.8
BraA08t34545Z Brassica rapa HOM05D003093 ORTHO05D004301 8.8e-53 211.8 344 43.9
Atru.chr12.588 Acer truncatum HOM05D003093 ORTHO05D004301 2.4e-50 203.8 132 77.3
TPR.G30178 Trifolium pratense HOM05D003093 ORTHO05D004301 1.0e-48 198.4 346 42.2
Nitab4.5_0012104g0020 Nicotiana tabacum HOM05D003093 ORTHO05D004301 7.2e-47 192.2 120 77.5
Carub.0005s2292 Capsella rubella HOM05D003093 ORTHO05D004301 3.7e-35 153.3 198 49.0
Nitab4.5_0022203g0010 Nicotiana tabacum HOM05D003093 ORTHO05D004301 8.0e-30 135.6 87 77.0
TPR.G4996 Trifolium pratense HOM05D003093 ORTHO05D004301 2.9e-27 127.1 348 33.9
BcaC01g00003 Brassica carinata HOM05D003093 ORTHO05D004301 7.0e-26 122.5 88 70.5
Psat2g098600 Pisum sativum HOM05D003093 ORTHO05D005088 5.0e-24 116.3 72 81.9
Nitab4.5_0000914g0160 Nicotiana tabacum HOM05D003093 ORTHO05D023197 6.6e-24 115.9 173 48.0
Psat2g086200 Pisum sativum HOM05D004430 ORTHO05D005088 3.3e-23 113.6 74 78.4
SMO340G0141 Selaginella moellendorffii HOM05D003093 ORTHO05D004301 9.5e-23 112.1 89 61.8
Atru.chr12.587 Acer truncatum HOM05D003093 ORTHO05D023197 1.2e-20 105.1 121 55.4
PSO275G0001 Papaver somniferum HOM05D003093 ORTHO05D004301 2.6e-20 104.0 64 81.2
TPR.G27067 Trifolium pratense HOM05D003093 ORTHO05D004301 3.4e-20 103.6 160 43.8
AL5G37210 Arabidopsis lyrata HOM05D003093 ORTHO05D004301 7.5e-20 102.4 160 46.2
MELO3C030596.2 Cucumis melo HOM05D003093 ORTHO05D023197 2.6e-12 77.4 98 53.1
Aqoxy7G01480 Aquilegia oxysepala HOM05D003093 ORTHO05D077548 2.2e-11 74.3 139 41.0
FAN23G2086 Fragaria x ananassa HOM05D000539 ORTHO05D023197 1.4e-10 71.6 101 46.5
FAN25G2354 Fragaria x ananassa HOM05D003093 ORTHO05D004301 2.4e-10 70.9 88 51.1
AT3G56790 Arabidopsis thaliana HOM05D003093 ORTHO05D082132 7.3e-07 59.3 98 44.9
Medtr5g039050 Medicago truncatula HOM05D003093 ORTHO05D004301 2.8e-06 57.4 42 71.4


User provided reference genes

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