Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nn2g13909 Nelumbo nucifera HOM05D003791 ORTHO05D004961 0.0e+00 1855.9 949 100.0
TAR623G0647 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1599.7 958 85.3
TAR369G0287 Trochodendron aralioides HOM05D003791 ORTHO05D004961 0.0e+00 1536.5 954 81.2
GSVIVG01031443001 Vitis vinifera HOM05D003791 ORTHO05D004961 0.0e+00 1511.5 910 80.9
Thecc.09G295700 Theobroma cacao HOM05D003791 ORTHO05D004961 0.0e+00 1507.7 953 80.9
Ciclev10027764m.g Citrus clementina HOM05D003791 ORTHO05D004961 0.0e+00 1494.9 956 79.3
COL.COLO4_19230 Corchorus olitorius HOM05D003791 ORTHO05D004961 0.0e+00 1491.1 910 81.5
Atru.chr3.3491 Acer truncatum HOM05D003791 ORTHO05D004961 0.0e+00 1489.9 955 79.1
CiPaw.13G143800 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1488.4 957 78.7
Actinidia07195 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1486.1 957 79.9
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla HOM05D003791 ORTHO05D004961 0.0e+00 1485.7 960 79.2
Aqoxy1G01033 Aquilegia oxysepala HOM05D003791 ORTHO05D004961 0.0e+00 1484.9 957 79.3
Gohir.D08G013600 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1484.2 953 79.4
Manes.11G154100 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1482.2 954 79.8
Gohir.A08G003200 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1480.3 949 79.6
Gorai.004G007900 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1478.8 950 79.4
Potri.001G212700 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1476.1 954 79.0
CSS0014729 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1474.5 961 78.8
Haze_23510 Corylus avellana HOM05D003791 ORTHO05D004961 0.0e+00 1474.5 984 77.1
Lj3g0020816 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1473.4 955 76.9
Actinidia24158 Actinidia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1468.4 955 79.2
Eucgr.B03911 Eucalyptus grandis HOM05D003791 ORTHO05D004961 0.0e+00 1468.4 962 77.4
PGR102G1149 Punica granatum HOM05D003791 ORTHO05D004961 0.0e+00 1466.4 962 78.6
Duzib168G1694 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1466.1 951 78.4
Glyma.11G191000 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1465.3 958 78.3
Sabra04G0148600 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1465.3 961 77.9
Cfa010128 Carpinus fangiana HOM05D003791 ORTHO05D004961 0.0e+00 1464.9 911 78.9
RcHm_v2.0_Chr5g0056311 Rosa chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1464.5 957 76.8
Gohir.A09G087400 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1463.7 954 78.9
Gohir.D09G087100 Gossypium hirsutum HOM05D003791 ORTHO05D004961 0.0e+00 1463.4 952 79.0
Prupe.6G114800 Prunus persica HOM05D003791 ORTHO05D004961 0.0e+00 1463.0 961 78.0
Potri.009G002400 Populus trichocarpa HOM05D003791 ORTHO05D004961 0.0e+00 1462.6 951 77.9
Manes.04G011800 Manihot esculenta HOM05D003791 ORTHO05D004961 0.0e+00 1462.2 953 78.3
FvH4_3g30370 Fragaria vesca HOM05D003791 ORTHO05D004961 0.0e+00 1461.4 959 76.6
Lj3g0026116 Lotus japonicus HOM05D003791 ORTHO05D004961 0.0e+00 1460.3 958 76.2
Phvul.011G088100 Phaseolus vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1459.9 957 77.5
Rhsim13G0102400 Rhododendron simsii HOM05D003791 ORTHO05D004961 0.0e+00 1459.1 912 78.7
FAN11G2854 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1457.2 959 76.4
FAN21G3702 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1457.2 961 76.4
Nitab4.5_0004517g0020 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1455.3 973 76.6
VMungo1127G0886 Vigna mungo HOM05D003791 ORTHO05D004961 0.0e+00 1455.3 957 77.4
TWI79G0622 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 0.0e+00 1453.7 954 77.4
FAN16G1431 Fragaria x ananassa HOM05D003791 ORTHO05D004961 0.0e+00 1453.3 955 76.5
MD11G1151700 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1453.3 959 77.8
CAN.G1432.22 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1452.6 958 76.7
CiPaw.14G105700 Carya illinoinensis HOM05D003791 ORTHO05D004961 0.0e+00 1452.2 955 77.0
Psat7g191520 Pisum sativum HOM05D003791 ORTHO05D004961 0.0e+00 1452.2 959 75.9
Lalb_Chr22g0350471 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1451.8 959 77.7
TPR.G35046 Trifolium pratense HOM05D003791 ORTHO05D004961 0.0e+00 1451.4 958 76.0
Glyma.12G083300 Glycine max HOM05D003791 ORTHO05D004961 0.0e+00 1451.0 952 77.1
Cc01_g10100 Coffea canephora HOM05D003791 ORTHO05D004961 0.0e+00 1443.7 958 75.8
Sopen11g026300 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1443.7 958 75.5
Migut.N02533 Erythranthe guttata HOM05D003791 ORTHO05D004961 0.0e+00 1443.3 956 77.0
PSO339G5439 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1439.5 960 77.5
CsaV3_1G014360 Cucumis sativus L. HOM05D003791 ORTHO05D004961 0.0e+00 1439.1 958 75.9
Solyc06g074740.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1437.9 963 76.4
Solyc11g066560.3 Solanum lycopersicum HOM05D003791 ORTHO05D004961 0.0e+00 1437.6 958 74.9
Ca_19327_v3 Cicer arietinum L. HOM05D003791 ORTHO05D004961 0.0e+00 1436.4 958 75.6
MELO3C004827.2 Cucumis melo HOM05D003791 ORTHO05D004961 0.0e+00 1436.4 958 75.7
PSO063G7392 Papaver somniferum HOM05D003791 ORTHO05D004961 0.0e+00 1436.4 960 77.4
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1436.0 961 77.4
CANSAT64G0962 Cannabis sativa HOM05D003791 ORTHO05D004961 0.0e+00 1436.0 963 76.6
Sopen06g031150 Solanum pennellii HOM05D003791 ORTHO05D004961 0.0e+00 1436.0 960 76.2
Medtr4g056480 Medicago truncatula HOM05D003791 ORTHO05D004961 0.0e+00 1435.2 961 75.4
ECA233G0170 Erigeron canadensis HOM05D003791 ORTHO05D004961 0.0e+00 1434.5 958 75.7
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1433.7 964 77.1
DCAR_006140 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1433.3 918 75.1
Peaxi162Scf00150g00213 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1432.9 959 76.4
CSS0049530 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1432.5 958 77.2
DCAR_018754 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1424.5 977 74.0
HanXRQChr13g0403561 Helianthus annuus HOM05D003791 ORTHO05D004961 0.0e+00 1422.1 956 74.8
MD03G1129800 Malus domestica HOM05D003791 ORTHO05D004961 0.0e+00 1422.1 954 76.0
Gorai.006G103500 Gossypium raimondii HOM05D003791 ORTHO05D004961 0.0e+00 1421.4 953 77.4
Sed0022437 Sechium edule HOM05D003791 ORTHO05D004961 0.0e+00 1419.8 957 75.0
Duzib170G1073 Durio zibethinus HOM05D003791 ORTHO05D004961 0.0e+00 1415.6 960 76.4
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1414.4 966 75.1
CAN.G546.67 Capsicum annuum HOM05D003791 ORTHO05D004961 0.0e+00 1407.1 915 75.7
vmacro03244 Vaccinium macrocarpon HOM05D003791 ORTHO05D004961 0.0e+00 1399.0 1181 64.5
Nitab4.5_0000173g0320 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1392.9 922 75.5
CDE09G0630 Ceratophyllum demersum HOM05D003791 ORTHO05D004961 0.0e+00 1392.5 951 72.5
SalBow3G1938 Salvia bowleyana HOM05D003791 ORTHO05D004961 0.0e+00 1389.8 963 74.6
Sabra09G0001100 Salix brachista HOM05D003791 ORTHO05D004961 0.0e+00 1383.6 978 71.8
THA.LOC104800566 Tarenaya hassleriana HOM05D003791 ORTHO05D004961 0.0e+00 1381.3 957 73.9
BolC5t29388H Brassica oleracea HOM05D003791 ORTHO05D004961 0.0e+00 1375.1 966 73.6
ATR0580G402 Amborella trichopoda HOM05D003791 ORTHO05D004961 0.0e+00 1374.0 920 74.1
C05p06320 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1373.2 979 72.7
A06p05250 Brassica napus HOM05D003791 ORTHO05D004961 0.0e+00 1371.3 982 72.5
BraA06t23732Z Brassica rapa HOM05D003791 ORTHO05D004961 0.0e+00 1371.3 982 72.5
Thhalv10006697m.g Eutrema salsugineum HOM05D003791 ORTHO05D004961 0.0e+00 1371.3 969 72.3
Carub.0001s0755 Capsella rubella HOM05D003791 ORTHO05D004961 0.0e+00 1367.8 968 72.1
Oeu035522.1 Olea europaea HOM05D003791 ORTHO05D004961 0.0e+00 1366.3 919 74.3
Lsat_1_v5_gn_6_42140 Lactuca sativa HOM05D003791 ORTHO05D004961 0.0e+00 1364.0 953 73.1
Lalb_Chr03g0027821 Lupinus albus HOM05D003791 ORTHO05D004961 0.0e+00 1363.2 949 73.1
CARHR008020 Cardamine hirsuta HOM05D003791 ORTHO05D004961 0.0e+00 1360.9 957 71.8
AL1G18600 Arabidopsis lyrata HOM05D003791 ORTHO05D004961 0.0e+00 1358.6 975 72.4
AT1G08190 Arabidopsis thaliana HOM05D003791 ORTHO05D004961 0.0e+00 1355.9 979 71.8
Dinv29393 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1355.1 829 80.1
Sp1g06840 Schrenkiella parvula HOM05D003791 ORTHO05D004961 0.0e+00 1355.1 967 72.7
Hund00856 Selenicereus undatus HOM05D003791 ORTHO05D004961 0.0e+00 1350.1 953 69.7
Aa31LG11G12710 Aethionema arabicum HOM05D003791 ORTHO05D004961 0.0e+00 1349.0 955 71.5
Nitab4.5_0003470g0120 Nicotiana tabacum HOM05D003791 ORTHO05D004961 0.0e+00 1343.6 906 75.7
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea HOM05D003791 ORTHO05D004961 0.0e+00 1331.2 966 71.7
unitig_22.g5654 Utricularia gibba HOM05D003791 ORTHO05D004961 0.0e+00 1328.9 955 69.1
EL10Ac9g20994 Beta vulgaris HOM05D003791 ORTHO05D004961 0.0e+00 1318.1 952 68.7
SGA_v2.0_scaffold83G26445 Striga asiatica HOM05D003791 ORTHO05D004961 0.0e+00 1312.7 822 76.9
Os04g0195000 Oryza sativa ssp. japonica HOM05D003791 ORTHO05D004961 0.0e+00 1302.0 919 67.8
Peaxi162Scf00114g00310 Petunia axillaris HOM05D003791 ORTHO05D004961 0.0e+00 1294.6 917 70.6
AUR62024040 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1283.9 908 68.2
SHI06192 Sapria himalayana HOM05D003791 ORTHO05D004961 0.0e+00 1261.9 917 69.5
SEGI_35272 Sequoiadendron giganteum HOM05D003791 ORTHO05D004961 0.0e+00 1246.1 924 66.6
Sc21g0003980 Simmondsia chinensis HOM05D003791 ORTHO05D004961 0.0e+00 1224.5 784 78.2
Lj1A216G25 Lonicera japonica HOM05D003791 ORTHO05D004961 0.0e+00 1224.2 790 76.8
CSS0001832 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 0.0e+00 1170.2 726 78.9
DCAR_015496 Daucus carota HOM05D003791 ORTHO05D004961 0.0e+00 1150.6 970 62.3
Mapoly0052s0125 Marchantia polymorpha HOM05D003791 ORTHO05D004961 0.0e+00 1129.4 995 59.8
AUR62040426 Chenopodium quinoa HOM05D003791 ORTHO05D004961 0.0e+00 1122.8 782 68.8
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis HOM05D003791 ORTHO05D004961 0.0e+00 1119.8 979 58.0
Pp3c15_14510 Physcomitrium patens HOM05D003791 ORTHO05D004961 0.0e+00 1114.4 925 59.6
Dinv12566 Davidia involucrata HOM05D003791 ORTHO05D004961 0.0e+00 1105.5 687 79.9
Ah.01g004870 Amaranthus hybridus HOM05D003791 ORTHO05D004961 8.4e-310 1067.0 946 60.5
ClCG09G017560 Citrullus lanatus HOM05D003791 ORTHO05D004961 8.7e-291 1003.8 718 72.7
HPP92_012850 Vanilla planifolia HOM05D003791 ORTHO05D004961 9.0e-288 993.8 661 76.1
SMO118G0273 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 5.3e-280 968.0 786 60.3
Nn6g35161 Nelumbo nucifera HOM05D003791 ORTHO05D004961 1.5e-274 949.9 561 85.2
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea HOM05D003791 ORTHO05D004961 7.9e-268 927.5 669 72.3
HPP92_012843 Vanilla planifolia HOM05D003791 ORTHO05D004961 2.9e-262 909.1 591 78.2
QL01p014586 Quercus lobata HOM05D003791 ORTHO05D004961 1.8e-232 810.1 520 76.2
QL03p064651 Quercus lobata HOM05D003791 ORTHO05D004961 4.6e-223 778.9 598 67.4
FAN21G1169 Fragaria x ananassa HOM05D003791 ORTHO05D004961 1.0e-206 724.5 487 72.9
QL03p064641 Quercus lobata HOM05D003791 ORTHO05D004961 1.2e-191 674.5 441 79.8
Nn6g32817 Nelumbo nucifera HOM05D003791 ORTHO05D004961 7.8e-191 671.8 386 86.0
Nn6g35165 Nelumbo nucifera HOM05D003791 ORTHO05D004961 8.7e-190 668.3 408 85.5
PRCOL_00006500 Prasinoderma coloniale HOM05D003791 ORTHO05D004961 2.4e-171 607.1 974 37.7
Zm00001eb066510 Zea mays HOM05D003791 ORTHO05D004961 7.9e-151 538.9 411 63.5
Mapoly0052s0123 Marchantia polymorpha HOM05D003791 ORTHO05D004961 1.3e-145 521.5 417 62.6
MCO08G243 Micromonas commoda HOM05D003791 ORTHO05D004961 9.7e-141 505.4 821 37.3
Cpa.g.sc47.25 Carica papaya HOM05D003791 ORTHO05D004961 6.3e-116 422.9 480 51.0
Cre03.g209281 Chlamydomonas reinhardtii HOM05D003791 ORTHO05D004961 1.1e-107 395.6 1052 27.8
TWI75G0171 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 5.0e-105 386.7 252 72.6
Zm00001eb043500 Zea mays HOM05D003791 ORTHO05D004961 5.6e-104 383.3 287 66.2
Cpa.g.sc47.26 Carica papaya HOM05D003791 ORTHO05D004961 4.7e-103 380.2 223 81.6
SMO266G0036 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 1.2e-101 375.6 874 32.4
Zm00001eb057600 Zea mays HOM05D003791 ORTHO05D004961 5.2e-94 350.1 253 66.4
Zm00001eb364150 Zea mays HOM05D003791 ORTHO05D004961 5.2e-94 350.1 253 66.4
CBR_g63066 Chara braunii HOM05D003791 ORTHO05D000002 1.1e-91 342.4 365 47.1
ClCG00G003900 Citrullus lanatus HOM05D003791 ORTHO05D004961 1.0e-89 335.9 249 65.9
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea HOM05D003791 ORTHO05D004961 9.2e-83 312.8 286 59.4
Nn2g15996 Nelumbo nucifera HOM05D003791 ORTHO05D004961 4.5e-61 240.7 118 100.0
DCAR_031428 Daucus carota HOM05D003791 ORTHO05D004961 2.5e-56 224.9 148 70.9
SMO297G0006 Selaginella moellendorffii HOM05D003791 ORTHO05D004961 2.2e-52 211.8 174 54.0
Zm00001eb157910 Zea mays HOM05D003791 ORTHO05D004961 1.0e-49 203.0 149 62.4
Zm00001eb222800 Zea mays HOM05D003791 ORTHO05D004961 1.0e-49 203.0 149 62.4
Zm00001eb291510 Zea mays HOM05D003791 ORTHO05D004961 2.2e-47 195.3 139 64.0
FAN21G2323 Fragaria x ananassa HOM05D003791 ORTHO05D004961 2.4e-46 191.8 244 48.4
Ah.09g226470 Amaranthus hybridus HOM05D003791 ORTHO05D019539 5.5e-43 180.6 170 53.5
Zm00001eb291520 Zea mays HOM05D003791 ORTHO05D004961 2.2e-39 168.7 99 79.8
CBR_g75953 Chara braunii HOM05D003791 ORTHO05D004961 5.3e-38 164.1 141 52.5
AUR62024999 Chenopodium quinoa HOM05D003791 ORTHO05D019539 1.4e-35 156.0 110 69.1
Oeu000610.1 Olea europaea HOM05D003791 ORTHO05D004961 6.1e-34 150.6 131 58.8
GSVIVG01024429001 Vitis vinifera HOM05D003791 ORTHO05D013423 8.8e-33 146.7 103 70.9
AUR62024027 Chenopodium quinoa HOM05D003791 ORTHO05D000022 3.7e-31 141.4 102 68.6
Nn2g15995 Nelumbo nucifera HOM05D003791 ORTHO05D004961 6.3e-31 140.6 65 100.0
Ah.10g024760 Amaranthus hybridus HOM05D001024 ORTHO05D000878 2.0e-29 135.6 118 55.9
Cfa022812 Carpinus fangiana HOM05D003791 ORTHO05D123815 3.5e-29 134.8 585 23.1
CSS0018078 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.5e-29 134.4 72 86.1
CSS0038043 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 4.5e-29 134.4 72 86.1
DCAR_024781 Daucus carota HOM05D003791 ORTHO05D004961 7.7e-29 133.7 88 75.0
CSS0039906 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.2e-28 132.1 72 84.7
CSS0027626 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 5.0e-28 131.0 74 82.4
Ah.13g066400 Amaranthus hybridus HOM05D003791 ORTHO05D019539 1.9e-27 129.0 112 53.6
CSS0036642 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 1.9e-27 129.0 72 81.9
CSS0017290 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D004961 2.5e-27 128.6 72 81.9
AUR62040427 Chenopodium quinoa HOM05D003791 ORTHO05D019539 4.7e-26 124.4 124 50.8
Lj1C215T10 Lonicera japonica HOM05D003791 ORTHO05D019539 1.8e-25 122.5 121 52.1
GSVIVG01004781001 Vitis vinifera HOM05D003791 ORTHO05D013423 3.2e-19 101.7 78 66.7
TWI75G0356 Tripterygium wilfordii HOM05D003791 ORTHO05D004961 4.7e-18 97.8 128 45.3
RcHm_v2.0_Chr5g0056291 Rosa chinensis HOM05D003791 ORTHO05D004961 5.0e-12 77.8 82 50.0
HanXRQChr15g0465621 Helianthus annuus HOM05D003791 ORTHO05D019539 1.6e-10 72.8 66 56.1
PSO339G1674 Papaver somniferum HOM05D003791 ORTHO05D004961 1.8e-09 69.3 46 60.9
GSVIVG01014936001 Vitis vinifera HOM05D003919 ORTHO05D004906 2.3e-09 68.9 53 62.3
AagrBONN_evm.TU.Sc2ySwM_368.1888 Anthoceros agrestis HOM05D004575 ORTHO05D004251 5.2e-09 67.8 42 73.8
CSS0019611 Camellia sinensis var. sinensis HOM05D003791 ORTHO05D019539 2.6e-08 65.5 132 40.9
Pp3c9_21930 Physcomitrium patens HOM05D003791 ORTHO05D308914 1.4e-06 59.7 43 60.5


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