Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010831g0020 Nicotiana tabacum HOM05D001076 ORTHO05D005313 6.7e-65 250.8 147 100.0
Nitab4.5_0002368g0120 Nicotiana tabacum HOM05D001076 ORTHO05D005313 8.2e-55 217.2 107 96.3
CAN.G65.193 Capsicum annuum HOM05D001076 ORTHO05D005313 3.1e-54 215.3 107 94.4
Peaxi162Scf00973g00315 Petunia axillaris HOM05D001076 ORTHO05D005313 6.9e-54 214.2 107 95.3
Solyc06g073550.3 Solanum lycopersicum HOM05D001076 ORTHO05D005313 6.9e-54 214.2 107 93.5
Sopen06g029910 Solanum pennellii HOM05D001076 ORTHO05D005313 9.1e-54 213.8 107 92.5
SGA_v2.0_scaffold29G12156 Striga asiatica HOM05D001076 ORTHO05D005313 1.6e-50 203.0 147 76.2
Oeu025934.1 Olea europaea HOM05D001076 ORTHO05D005313 6.1e-50 201.1 107 86.9
Oeu032039.2 Olea europaea HOM05D001076 ORTHO05D005313 5.1e-49 198.0 107 86.0
Dinv24006 Davidia involucrata HOM05D001076 ORTHO05D005313 5.7e-48 194.5 107 84.1
COL.COLO4_18350 Corchorus olitorius HOM05D001076 ORTHO05D005313 7.4e-48 194.1 147 72.8
vmacro04099 Vaccinium macrocarpon HOM05D001076 ORTHO05D005313 4.8e-47 191.4 107 81.3
Actinidia24477 Actinidia chinensis HOM05D001076 ORTHO05D005313 1.2e-45 186.8 107 80.4
MSTRG.17645 Avicennia marina HOM05D001076 ORTHO05D005313 1.5e-45 186.4 107 81.3
Hund08090 Selenicereus undatus HOM05D001076 ORTHO05D005313 2.0e-45 186.0 107 79.4
Manes.05G195600 Manihot esculenta HOM05D001076 ORTHO05D005313 2.6e-45 185.7 107 79.4
CSS0006132 Camellia sinensis var. sinensis HOM05D001076 ORTHO05D005313 3.4e-45 185.3 107 79.4
Cc01_g06920 Coffea canephora HOM05D001076 ORTHO05D005313 5.9e-45 184.5 107 80.4
Dinv10719 Davidia involucrata HOM05D001076 ORTHO05D005313 1.3e-44 183.3 107 81.3
Sabra09G0010600 Salix brachista HOM05D001076 ORTHO05D005313 1.3e-44 183.3 151 62.9
MBI19_g06402_MAGBIO Magnolia biondii HOM05D001076 ORTHO05D005313 1.7e-44 183.0 107 79.4
SalBow6G5099 Salvia bowleyana HOM05D001076 ORTHO05D005313 2.2e-44 182.6 105 79.0
MSTRG.12429 Avicennia marina HOM05D001076 ORTHO05D005313 2.9e-44 182.2 105 81.9
Sc21g0000250 Simmondsia chinensis HOM05D001076 ORTHO05D005313 2.9e-44 182.2 107 79.4
SGA_v2.0_scaffold79G25564 Striga asiatica HOM05D001076 ORTHO05D005313 2.9e-44 182.2 107 81.3
TAR636G0566 Trochodendron aralioides HOM05D001076 ORTHO05D005313 2.9e-44 182.2 107 78.5
Nn7g37238 Nelumbo nucifera HOM05D001076 ORTHO05D005313 3.8e-44 181.8 107 80.4
ClCG02G024230 Citrullus lanatus HOM05D001076 ORTHO05D005313 5.0e-44 181.4 107 76.6
CsaV3_4G017360 Cucumis sativus L. HOM05D001076 ORTHO05D005313 5.0e-44 181.4 107 76.6
Aqoxy1G00101 Aquilegia oxysepala HOM05D001076 ORTHO05D005313 6.5e-44 181.0 107 78.5
Gorai.009G105800 Gossypium raimondii HOM05D001076 ORTHO05D005313 6.5e-44 181.0 107 79.4
Sed0024490 Sechium edule HOM05D001076 ORTHO05D005313 6.5e-44 181.0 107 76.6
arahy.Tifrunner.gnm1.ann1.DIB5MP Arachis hypogaea HOM05D001076 ORTHO05D005313 8.5e-44 180.6 107 79.4
TPR.G11306 Trifolium pratense HOM05D001076 ORTHO05D005313 8.5e-44 180.6 107 76.6
Cpa.g.sc34.223 Carica papaya HOM05D001076 ORTHO05D005313 1.1e-43 180.3 107 76.6
Gohir.A03G034600 Gossypium hirsutum HOM05D001076 ORTHO05D005313 1.1e-43 180.3 107 78.5
Gohir.A05G101900 Gossypium hirsutum HOM05D001076 ORTHO05D005313 1.1e-43 180.3 107 79.4
Gohir.D05G101600 Gossypium hirsutum HOM05D001076 ORTHO05D005313 1.1e-43 180.3 107 79.4
Potri.009G018100 Populus trichocarpa HOM05D001076 ORTHO05D005313 1.4e-43 179.9 107 78.5
Ciclev10014180m.g Citrus clementina HOM05D001076 ORTHO05D005313 2.5e-43 179.1 107 78.5
Migut.D00698 Erythranthe guttata HOM05D001076 ORTHO05D005313 2.5e-43 179.1 105 79.0
Lalb_Chr04g0249621 Lupinus albus HOM05D001076 ORTHO05D005313 2.5e-43 179.1 107 76.6
PGR102G0053 Punica granatum HOM05D001076 ORTHO05D005313 2.5e-43 179.1 107 77.6
Actinidia06991 Actinidia chinensis HOM05D001076 ORTHO05D005313 3.2e-43 178.7 107 76.6
arahy.Tifrunner.gnm1.ann1.LSK0UK Arachis hypogaea HOM05D001076 ORTHO05D005313 3.2e-43 178.7 107 78.5
Medtr5g088200 Medicago truncatula HOM05D001076 ORTHO05D005313 3.2e-43 178.7 107 76.6
LjContig00564g0003968 Lotus japonicus HOM05D001076 ORTHO05D005313 4.2e-43 178.3 107 76.6
ECA238G0666 Erigeron canadensis HOM05D001076 ORTHO05D005313 7.2e-43 177.6 104 77.9
TWI31G1498 Tripterygium wilfordii HOM05D001076 ORTHO05D005313 7.2e-43 177.6 107 76.6
AUR62037158 Chenopodium quinoa HOM05D001076 ORTHO05D005313 9.4e-43 177.2 107 76.6
Potri.001G220100 Populus trichocarpa HOM05D001076 ORTHO05D005313 9.4e-43 177.2 107 76.6
GSVIVG01037494001 Vitis vinifera HOM05D001076 ORTHO05D005313 9.4e-43 177.2 104 79.8
Cfa010270 Carpinus fangiana HOM05D001076 ORTHO05D005313 1.2e-42 176.8 107 78.5
TWI79G0397 Tripterygium wilfordii HOM05D001076 ORTHO05D005313 1.2e-42 176.8 107 75.7
Eucgr.B03778 Eucalyptus grandis HOM05D001076 ORTHO05D005313 1.6e-42 176.4 107 75.7
Prupe.6G155800 Prunus persica HOM05D001076 ORTHO05D005313 1.6e-42 176.4 107 76.6
Thecc.09G338800 Theobroma cacao HOM05D001076 ORTHO05D005313 1.6e-42 176.4 107 78.5
Gohir.D03G133700 Gossypium hirsutum HOM05D001076 ORTHO05D005313 2.1e-42 176.0 107 77.6
Gorai.003G140800 Gossypium raimondii HOM05D001076 ORTHO05D005313 2.1e-42 176.0 107 77.6
PSO339G4393 Papaver somniferum HOM05D001076 ORTHO05D005313 2.1e-42 176.0 107 76.6
PSO384G3024 Papaver somniferum HOM05D001076 ORTHO05D005313 2.1e-42 176.0 107 76.6
Haze_23682 Corylus avellana HOM05D001076 ORTHO05D005313 3.6e-42 175.3 107 77.6
MD00G1106400 Malus domestica HOM05D001076 ORTHO05D005313 3.6e-42 175.3 107 76.6
Psat2g021800 Pisum sativum HOM05D001076 ORTHO05D005313 3.6e-42 175.3 109 75.2
EL10Ac9g22356 Beta vulgaris HOM05D001076 ORTHO05D005313 4.7e-42 174.9 107 74.8
HanXRQChr06g0180661 Helianthus annuus HOM05D001076 ORTHO05D005313 4.7e-42 174.9 107 73.8
RcHm_v2.0_Chr5g0050001 Rosa chinensis HOM05D001076 ORTHO05D005313 4.7e-42 174.9 107 76.6
SalBow3G3618 Salvia bowleyana HOM05D001076 ORTHO05D005313 4.7e-42 174.9 108 78.7
AUR62025106 Chenopodium quinoa HOM05D001076 ORTHO05D005313 6.1e-42 174.5 107 75.7
FvH4_3g27710 Fragaria vesca HOM05D001076 ORTHO05D005313 6.1e-42 174.5 107 76.6
Glyma.02G275300 Glycine max HOM05D001076 ORTHO05D005313 8.0e-42 174.1 131 65.6
VMungo0647G0819 Vigna mungo HOM05D001076 ORTHO05D005313 8.0e-42 174.1 93 84.9
Duzib170G0755 Durio zibethinus HOM05D001076 ORTHO05D005313 1.4e-41 173.3 107 76.6
Sed0000524 Sechium edule HOM05D001076 ORTHO05D005313 1.8e-41 172.9 107 73.8
Atru.chr3.2884 Acer truncatum HOM05D001076 ORTHO05D005313 3.0e-41 172.2 107 75.7
DCAR_028376 Daucus carota HOM05D001076 ORTHO05D005313 3.9e-41 171.8 100 79.0
CANSAT54G1858 Cannabis sativa HOM05D001076 ORTHO05D005313 1.1e-40 170.2 107 75.7
Phvul.008G206300 Phaseolus vulgaris HOM05D001076 ORTHO05D005313 1.1e-40 170.2 93 83.9
ATR0307G062 Amborella trichopoda HOM05D001076 ORTHO05D005313 2.0e-40 169.5 113 71.7
Glyma.14G040900 Glycine max HOM05D001076 ORTHO05D005313 2.6e-40 169.1 122 68.0
Sp6g23360 Schrenkiella parvula HOM05D001076 ORTHO05D005313 4.4e-40 168.3 107 72.0
MD11G1183000 Malus domestica HOM05D001076 ORTHO05D005313 5.7e-40 167.9 104 75.0
Hma1.2p1_1632F.1_g294685 Hydrangea macrophylla HOM05D001076 ORTHO05D005313 7.4e-40 167.5 107 74.8
Lsat_1_v5_gn_2_38521 Lactuca sativa HOM05D001076 ORTHO05D005313 9.7e-40 167.2 147 58.5
Lalb_Chr17g0347591 Lupinus albus HOM05D001076 ORTHO05D005313 2.2e-39 166.0 107 72.0
AL6G32780 Arabidopsis lyrata HOM05D001076 ORTHO05D005313 3.7e-39 165.2 107 71.0
BNapus_Darmor_BZH_scaffold_38p01060 Brassica napus HOM05D001076 ORTHO05D005313 6.3e-39 164.5 107 70.1
BcaB05g22768 Brassica carinata HOM05D001076 ORTHO05D005313 8.2e-39 164.1 107 70.1
BcaC03g13841 Brassica carinata HOM05D001076 ORTHO05D005313 8.2e-39 164.1 107 70.1
BraA02t05622Z Brassica rapa HOM05D001076 ORTHO05D005313 8.2e-39 164.1 107 70.1
CDE04G2270 Ceratophyllum demersum HOM05D001076 ORTHO05D005313 8.2e-39 164.1 107 72.0
AT5G21160 Arabidopsis thaliana HOM05D001076 ORTHO05D005313 1.4e-38 163.3 107 70.1
Thhalv10012690m.g Eutrema salsugineum HOM05D001076 ORTHO05D005313 1.4e-38 163.3 107 71.0
BolC2t07110H Brassica oleracea HOM05D001076 ORTHO05D005313 1.8e-38 162.9 107 70.1
Aa31LG1G13620 Aethionema arabicum HOM05D001076 ORTHO05D005313 2.4e-38 162.5 96 78.1
CARHR191710 Cardamine hirsuta HOM05D001076 ORTHO05D005313 4.1e-38 161.8 107 71.0
A10p18920 Brassica napus HOM05D001076 ORTHO05D005313 5.3e-38 161.4 107 70.1
BraA10t43969Z Brassica rapa HOM05D001076 ORTHO05D005313 5.3e-38 161.4 107 70.1
QL01p007505 Quercus lobata HOM05D001076 ORTHO05D005313 7.0e-38 161.0 134 63.4
CDE07G1662 Ceratophyllum demersum HOM05D001076 ORTHO05D005313 1.6e-37 159.8 107 69.2
THA.LOC104810960 Tarenaya hassleriana HOM05D001076 ORTHO05D005313 2.0e-37 159.5 107 68.2
HPP92_028183 Vanilla planifolia HOM05D001076 ORTHO05D005313 2.6e-37 159.1 107 69.2
AagrBONN_evm.TU.Sc2ySwM_117.2161 Anthoceros agrestis HOM05D001076 ORTHO05D005313 3.5e-37 158.7 105 72.4
BcaC04g19520 Brassica carinata HOM05D001076 ORTHO05D005313 3.5e-37 158.7 107 69.2
C09p54900 Brassica napus HOM05D001076 ORTHO05D005313 3.5e-37 158.7 107 69.2
BolC9t58351H Brassica oleracea HOM05D001076 ORTHO05D005313 3.5e-37 158.7 107 69.2
BcaB08g36479 Brassica carinata HOM05D001076 ORTHO05D005313 1.3e-36 156.8 107 68.2
Mapoly0082s0081 Marchantia polymorpha HOM05D001076 ORTHO05D005313 2.9e-36 155.6 113 66.4
Carub.0006s1947 Capsella rubella HOM05D001076 ORTHO05D005313 3.8e-36 155.2 107 68.2
Ca_06162_v3 Cicer arietinum L. HOM05D001076 ORTHO05D005313 3.8e-36 155.2 107 67.3
Pp3c11_24960 Physcomitrium patens HOM05D001076 ORTHO05D005313 3.8e-36 155.2 95 75.8
SEGI_14698 Sequoiadendron giganteum HOM05D001076 ORTHO05D005313 1.1e-35 153.7 114 64.9
CBR_g40192 Chara braunii HOM05D001076 ORTHO05D005313 6.1e-34 147.9 92 72.8
Pp3c7_8450 Physcomitrium patens HOM05D001076 ORTHO05D005313 6.1e-34 147.9 92 75.0
Os01g0266000 Oryza sativa ssp. japonica HOM05D001076 ORTHO05D005313 2.3e-33 146.0 107 63.6
GSVIVG01029892001 Vitis vinifera HOM05D001076 ORTHO05D005313 4.1e-30 135.2 87 73.6
SMO119G0028 Selaginella moellendorffii HOM05D001076 ORTHO05D005313 4.5e-29 131.7 98 59.2
Migut.N02395 Erythranthe guttata HOM05D001076 ORTHO05D005313 7.7e-29 131.0 126 69.0
Ah.01g014660 Amaranthus hybridus HOM05D001076 ORTHO05D005313 2.2e-28 129.4 107 62.6
Peaxi162Scf00355g00111 Petunia axillaris HOM05D001076 ORTHO05D005313 5.5e-27 124.8 64 92.2
MCO09G615 Micromonas commoda HOM05D001076 ORTHO05D005313 2.3e-25 119.4 88 59.1
Cre10.g441200 Chlamydomonas reinhardtii HOM05D001076 ORTHO05D005313 4.0e-25 118.6 127 66.1
Zm00001eb333210 Zea mays HOM05D001076 ORTHO05D005313 1.7e-23 113.2 107 53.3
FAN16G3163 Fragaria x ananassa HOM05D001076 ORTHO05D005313 2.7e-21 105.9 162 40.1
FAN25G3724 Fragaria x ananassa HOM05D001076 ORTHO05D005313 1.0e-20 104.0 64 75.0
arahy.Tifrunner.gnm1.ann1.AA7KSY Arachis hypogaea HOM05D001076 ORTHO05D002537 1.3e-20 103.6 69 73.9
MELO3C014708.2 Cucumis melo HOM05D001076 ORTHO05D005313 1.9e-19 99.8 107 48.6
arahy.Tifrunner.gnm1.ann1.S17AEX Arachis hypogaea HOM05D001076 ORTHO05D002537 3.6e-18 95.5 79 64.6
Duzib168G1797 Durio zibethinus HOM05D001076 ORTHO05D005313 1.0e-17 94.0 51 80.4
MD11G1175800 Malus domestica HOM05D001076 ORTHO05D005313 2.2e-15 86.3 79 77.2
Lj1A247T60 Lonicera japonica HOM05D001076 ORTHO05D005313 2.4e-14 82.8 46 76.1
FAN11G3590 Fragaria x ananassa HOM05D001076 ORTHO05D005313 1.8e-09 66.6 57 61.4
AagrBONN_evm.TU.Sc2ySwM_228.5227 Anthoceros agrestis HOM05D001076 ORTHO05D005313 5.2e-09 65.1 42 69.0


User provided reference genes

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