Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0010487g0020 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.4e-87 325.5 162 100.0
Nitab4.5_0001761g0290 Nicotiana tabacum HOM05D001090 ORTHO05D006167 8.7e-74 280.4 161 88.8
Nitab4.5_0002558g0160 Nicotiana tabacum HOM05D001090 ORTHO05D006167 6.7e-66 254.2 147 88.4
Nitab4.5_0001796g0360 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.0e-54 216.1 162 72.2
Nitab4.5_0001763g0080 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.4e-39 166.8 230 46.5
Nitab4.5_0000886g0200 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.5e-38 163.3 141 63.8
Nitab4.5_0000172g1520 Nicotiana tabacum HOM05D001090 ORTHO05D006167 3.6e-27 125.6 65 92.3
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.2e-24 116.3 65 84.6
TPR.G2501 Trifolium pratense HOM05D001090 ORTHO05D006167 1.1e-23 114.0 82 72.0
TWI59G0772 Tripterygium wilfordii HOM05D001090 ORTHO05D006167 1.1e-23 114.0 82 70.7
RcHm_v2.0_Chr3g0485911 Rosa chinensis HOM05D001090 ORTHO05D006167 2.4e-23 112.8 82 72.0
TWI23G1021 Tripterygium wilfordii HOM05D001090 ORTHO05D006167 5.3e-23 111.7 82 69.5
FAN28G2823 Fragaria x ananassa HOM05D001090 ORTHO05D006167 1.2e-22 110.5 82 70.7
Thecc.01G325100 Theobroma cacao HOM05D001090 ORTHO05D006167 1.2e-22 110.5 82 68.3
Lalb_Chr04g0260211 Lupinus albus HOM05D001090 ORTHO05D006167 1.6e-22 110.2 82 72.0
Dinv12082 Davidia involucrata HOM05D001090 ORTHO05D006167 2.0e-22 109.8 82 70.7
FAN23G2339 Fragaria x ananassa HOM05D001090 ORTHO05D006167 2.0e-22 109.8 82 69.5
Medtr7g110640 Medicago truncatula HOM05D001090 ORTHO05D006167 2.0e-22 109.8 82 68.3
Atru.chr5.863 Acer truncatum HOM05D001090 ORTHO05D006167 2.7e-22 109.4 82 65.9
CsaV3_5G029690 Cucumis sativus L. HOM05D001090 ORTHO05D002687 2.7e-22 109.4 82 70.7
Lalb_Chr18g0046391 Lupinus albus HOM05D001090 ORTHO05D006167 2.7e-22 109.4 82 70.7
Potri.002G187100 Populus trichocarpa HOM05D001090 ORTHO05D006167 2.7e-22 109.4 82 69.5
Sabra14G0082800 Salix brachista HOM05D001090 ORTHO05D006167 2.7e-22 109.4 82 69.5
Glyma.03G224400 Glycine max HOM05D001090 ORTHO05D006167 3.5e-22 109.0 82 69.5
Manes.01G235000 Manihot esculenta HOM05D001090 ORTHO05D006167 3.5e-22 109.0 82 68.3
Manes.05G009100 Manihot esculenta HOM05D001090 ORTHO05D006167 3.5e-22 109.0 82 69.5
Oeu038075.1 Olea europaea HOM05D001090 ORTHO05D006167 3.5e-22 109.0 82 68.3
COL.COLO4_23131 Corchorus olitorius HOM05D001090 ORTHO05D006167 4.5e-22 108.6 82 67.1
FAN26G0681 Fragaria x ananassa HOM05D001090 ORTHO05D006167 4.5e-22 108.6 82 68.3
Potri.014G112600 Populus trichocarpa HOM05D001090 ORTHO05D006167 4.5e-22 108.6 82 69.5
arahy.Tifrunner.gnm1.ann1.2022SK Arachis hypogaea HOM05D001410 ORTHO05D006167 5.9e-22 108.2 82 69.5
arahy.Tifrunner.gnm1.ann1.XGP1KG Arachis hypogaea HOM05D001090 ORTHO05D006167 5.9e-22 108.2 82 69.5
ClCG11G013170 Citrullus lanatus HOM05D001090 ORTHO05D006167 5.9e-22 108.2 82 70.7
Lj1g0021730 Lotus japonicus HOM05D001090 ORTHO05D006167 5.9e-22 108.2 79 73.4
Phvul.001G218200 Phaseolus vulgaris HOM05D001090 ORTHO05D006167 5.9e-22 108.2 82 69.5
VMungo1383G1946 Vigna mungo HOM05D001090 ORTHO05D006167 5.9e-22 108.2 82 69.5
MELO3C011813.2 Cucumis melo HOM05D001090 ORTHO05D006167 7.7e-22 107.8 82 69.5
Duzib133G1021 Durio zibethinus HOM05D001090 ORTHO05D006167 7.7e-22 107.8 82 67.1
Duzib138G0040 Durio zibethinus HOM05D001090 ORTHO05D006167 7.7e-22 107.8 82 67.1
Glyma.19G221300 Glycine max HOM05D001090 ORTHO05D006167 7.7e-22 107.8 82 68.3
Gohir.A11G104600 Gossypium hirsutum HOM05D001090 ORTHO05D006167 7.7e-22 107.8 81 69.1
FvH4_1g26250 Fragaria vesca HOM05D001090 ORTHO05D006167 1.0e-21 107.5 82 68.3
CiPaw.08G082800 Carya illinoinensis HOM05D001090 ORTHO05D006167 1.3e-21 107.1 82 68.3
Prupe.3G002800 Prunus persica HOM05D001090 ORTHO05D006167 1.3e-21 107.1 82 68.3
Solyc01g080850.4 Solanum lycopersicum HOM05D001090 ORTHO05D006167 1.3e-21 107.1 82 68.3
Sopen01g030630 Solanum pennellii HOM05D001090 ORTHO05D006167 1.3e-21 107.1 82 68.3
CANSAT25G3150 Cannabis sativa HOM05D001090 ORTHO05D006167 1.7e-21 106.7 82 67.1
Cpa.g.sc57.13 Carica papaya HOM05D001090 ORTHO05D006167 1.7e-21 106.7 82 64.6
Ciclev10018812m.g Citrus clementina HOM05D001090 ORTHO05D006167 2.2e-21 106.3 82 67.1
Eucgr.K00564 Eucalyptus grandis HOM05D001090 ORTHO05D006167 2.2e-21 106.3 82 67.1
Nn3g21945 Nelumbo nucifera HOM05D001090 ORTHO05D006167 2.2e-21 106.3 82 64.6
CAN.G100.57 Capsicum annuum HOM05D001090 ORTHO05D006167 2.9e-21 105.9 82 67.1
Haze_05146 Corylus avellana HOM05D001090 ORTHO05D006167 2.9e-21 105.9 82 68.3
Gohir.D12G123700 Gossypium hirsutum HOM05D001090 ORTHO05D006167 2.9e-21 105.9 82 65.9
Gorai.008G134800 Gossypium raimondii HOM05D001090 ORTHO05D006167 2.9e-21 105.9 82 65.9
Sabra02G0129700 Salix brachista HOM05D001090 ORTHO05D006167 2.9e-21 105.9 82 69.5
GSVIVG01028251001 Vitis vinifera HOM05D001090 ORTHO05D006167 2.9e-21 105.9 82 68.3
Dinv33168 Davidia involucrata HOM05D001090 ORTHO05D006167 3.8e-21 105.5 82 68.3
Psat3g016720 Pisum sativum HOM05D001090 ORTHO05D006167 3.8e-21 105.5 82 65.9
PGR142G4102 Punica granatum HOM05D001090 ORTHO05D006167 3.8e-21 105.5 116 50.9
Sed0008475 Sechium edule HOM05D001090 ORTHO05D006167 3.8e-21 105.5 82 68.3
CSS0011193 Camellia sinensis var. sinensis HOM05D001090 ORTHO05D006167 5.0e-21 105.1 82 68.3
QL12p034939 Quercus lobata HOM05D001090 ORTHO05D006167 5.0e-21 105.1 82 67.1
Cfa004911 Carpinus fangiana HOM05D001090 ORTHO05D006167 8.5e-21 104.4 82 65.9
Gohir.D11G109400 Gossypium hirsutum HOM05D001090 ORTHO05D006167 8.5e-21 104.4 81 67.9
Gorai.007G117000 Gossypium raimondii HOM05D001090 ORTHO05D006167 8.5e-21 104.4 81 67.9
Lalb_Chr02g0147141 Lupinus albus HOM05D001090 ORTHO05D006167 8.5e-21 104.4 82 67.1
Ca_09245_v3 Cicer arietinum L. HOM05D001090 ORTHO05D006167 1.5e-20 103.6 82 65.9
Hund11624 Selenicereus undatus HOM05D001090 ORTHO05D006167 1.5e-20 103.6 82 64.6
EL10Ac7g17290 Beta vulgaris HOM05D001090 ORTHO05D006167 2.5e-20 102.8 82 59.8
DCAR_002936 Daucus carota HOM05D001090 ORTHO05D006167 2.5e-20 102.8 82 63.4
MD17G1284900 Malus domestica HOM05D001090 ORTHO05D006167 2.5e-20 102.8 82 64.6
Nn4g25350 Nelumbo nucifera HOM05D001090 ORTHO05D006167 2.5e-20 102.8 82 63.4
Peaxi162Scf00197g00004 Petunia axillaris HOM05D001090 ORTHO05D006167 2.5e-20 102.8 82 65.9
MD09G1290300 Malus domestica HOM05D001090 ORTHO05D006167 3.2e-20 102.4 82 64.6
Peaxi162Scf00309g00913 Petunia axillaris HOM05D001090 ORTHO05D006167 3.2e-20 102.4 82 65.9
Cc01_g21790 Coffea canephora HOM05D001090 ORTHO05D006167 4.2e-20 102.1 82 64.6
TAR365G0940 Trochodendron aralioides HOM05D001090 ORTHO05D006167 4.2e-20 102.1 82 64.6
Gohir.A12G120100 Gossypium hirsutum HOM05D001090 ORTHO05D006167 5.5e-20 101.7 82 63.4
Peaxi162Scf02266g00001 Petunia axillaris HOM05D001090 ORTHO05D006167 5.5e-20 101.7 82 64.6
Nitab4.5_0000222g0360 Nicotiana tabacum HOM05D001090 ORTHO05D006167 9.4e-20 100.9 82 64.6
Nitab4.5_0003092g0010 Nicotiana tabacum HOM05D001090 ORTHO05D006167 9.4e-20 100.9 82 64.6
ATR0598G284 Amborella trichopoda HOM05D001090 ORTHO05D006167 1.2e-19 100.5 72 69.4
Rhsim01G0000300 Rhododendron simsii HOM05D001090 ORTHO05D006167 1.2e-19 100.5 82 64.6
Aqoxy5G02821 Aquilegia oxysepala HOM05D001090 ORTHO05D006167 1.6e-19 100.1 82 63.4
Lj1A8G48 Lonicera japonica HOM05D001090 ORTHO05D006167 2.1e-19 99.8 78 65.4
Ah.15g091800 Amaranthus hybridus HOM05D001090 ORTHO05D006167 2.7e-19 99.4 82 59.8
THA.LOC104801326 Tarenaya hassleriana HOM05D001090 ORTHO05D006167 2.7e-19 99.4 82 59.8
vmacro02360 Vaccinium macrocarpon HOM05D001090 ORTHO05D006167 2.7e-19 99.4 73 68.5
AT4G01810 Arabidopsis thaliana HOM05D001090 ORTHO05D006167 3.6e-19 99.0 82 61.0
Aa31LG5G1560 Aethionema arabicum HOM05D001090 ORTHO05D002687 4.7e-19 98.6 82 62.2
AL6G51490 Arabidopsis lyrata HOM05D001090 ORTHO05D006167 4.7e-19 98.6 82 59.8
Carub.0006s3541 Capsella rubella HOM05D001090 ORTHO05D006167 6.1e-19 98.2 82 61.0
Os01g0321700 Oryza sativa ssp. japonica HOM05D001090 ORTHO05D006167 6.1e-19 98.2 82 61.0
BcaC04g24072 Brassica carinata HOM05D001090 ORTHO05D006167 8.0e-19 97.8 82 59.8
A09p01300 Brassica napus HOM05D001090 ORTHO05D006167 8.0e-19 97.8 82 59.8
C09p01350 Brassica napus HOM05D001090 ORTHO05D006167 8.0e-19 97.8 82 59.8
BolC9t53069H Brassica oleracea HOM05D001090 ORTHO05D006167 8.0e-19 97.8 82 59.8
BraA09t35795Z Brassica rapa HOM05D001090 ORTHO05D006167 8.0e-19 97.8 82 59.8
Thhalv10028421m.g Eutrema salsugineum HOM05D001090 ORTHO05D006167 8.0e-19 97.8 82 61.0
PSO761G0494 Papaver somniferum HOM05D001090 ORTHO05D006167 1.0e-18 97.4 82 62.2
MBI18_g10371_MAGBIO Magnolia biondii HOM05D001410 ORTHO05D006167 1.8e-18 96.7 82 61.0
CARHR249790 Cardamine hirsuta HOM05D001090 ORTHO05D006167 2.3e-18 96.3 82 58.5
HPP92_015635 Vanilla planifolia HOM05D001090 ORTHO05D006167 2.3e-18 96.3 82 61.0
ECA233G3948 Erigeron canadensis HOM05D001090 ORTHO05D006167 3.0e-18 95.9 82 59.8
PSO210G7365 Papaver somniferum HOM05D001090 ORTHO05D006167 3.0e-18 95.9 82 61.0
Sp6g01660 Schrenkiella parvula HOM05D001090 ORTHO05D006167 3.0e-18 95.9 82 58.5
MBI19_g30286_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D006167 4.0e-18 95.5 72 63.9
Zm00001eb340490 Zea mays HOM05D001090 ORTHO05D006167 4.0e-18 95.5 82 59.8
BcaB01g02111 Brassica carinata HOM05D001090 ORTHO05D006167 5.2e-18 95.1 72 62.5
MSTRG.15096 Avicennia marina HOM05D001090 ORTHO05D006167 6.8e-18 94.7 82 59.8
DCAR_005717 Daucus carota HOM05D001090 ORTHO05D006167 6.8e-18 94.7 72 65.3
Migut.N00921 Erythranthe guttata HOM05D001090 ORTHO05D006167 8.8e-18 94.4 82 58.5
Actinidia25871 Actinidia chinensis HOM05D001090 ORTHO05D006167 1.2e-17 94.0 82 62.2
Lsat_1_v5_gn_8_125581 Lactuca sativa HOM05D001090 ORTHO05D006167 1.5e-17 93.6 72 59.7
SGA_v2.0_scaffold198G41106 Striga asiatica HOM05D001090 ORTHO05D006167 5.7e-17 91.7 83 59.0
AUR62040321 Chenopodium quinoa HOM05D001090 ORTHO05D006167 9.8e-17 90.9 82 57.3
AUR62042130 Chenopodium quinoa HOM05D001090 ORTHO05D006167 9.8e-17 90.9 82 57.3
AUR62042131 Chenopodium quinoa HOM05D001090 ORTHO05D006167 9.8e-17 90.9 82 57.3
Sc17g0000010 Simmondsia chinensis HOM05D001090 ORTHO05D006167 1.3e-16 90.5 82 56.1
unitig_0.g2255 Utricularia gibba HOM05D001090 ORTHO05D006167 1.3e-16 90.5 82 53.7
HanXRQChr17g0555271 Helianthus annuus HOM05D001090 ORTHO05D006167 2.2e-16 89.7 82 54.9
CDE06G1382 Ceratophyllum demersum HOM05D001090 ORTHO05D006167 1.1e-15 87.4 82 52.4
SEGI_00376 Sequoiadendron giganteum HOM05D001090 ORTHO05D006167 4.1e-15 85.5 79 53.2
SMO119G0041 Selaginella moellendorffii HOM05D001090 ORTHO05D006167 1.0e-13 80.9 79 50.6
Mapoly0084s0040 Marchantia polymorpha HOM05D001090 ORTHO05D006167 1.3e-13 80.5 72 52.8
Peaxi162Scf02154g00004 Petunia axillaris HOM05D001090 ORTHO05D006167 1.1e-12 77.4 60 66.7
Nitab4.5_0001152g0730 Nicotiana tabacum HOM05D001090 ORTHO05D006167 1.2e-11 73.9 39 84.6
arahy.Tifrunner.gnm1.ann1.CM9LJ6 Arachis hypogaea HOM05D001090 ORTHO05D006167 2.7e-11 72.8 77 55.8
CBR_g939 Chara braunii HOM05D001090 ORTHO05D006167 2.7e-11 72.8 78 43.6
AagrBONN_evm.TU.Sc2ySwM_228.1595 Anthoceros agrestis HOM05D001090 ORTHO05D006167 2.3e-10 69.7 71 46.5
Pp3c8_12300 Physcomitrium patens HOM05D001090 ORTHO05D006167 6.8e-10 68.2 72 47.2
Pp3c24_9090 Physcomitrium patens HOM05D001090 ORTHO05D006167 1.2e-09 67.4 72 43.1
Nitab4.5_0000215g0050 Nicotiana tabacum HOM05D001090 ORTHO05D285144 7.5e-09 64.7 47 63.8
Nitab4.5_0000236g0020 Nicotiana tabacum HOM05D001090 ORTHO05D286749 1.1e-07 60.8 41 78.0
Nitab4.5_0010445g0020 Nicotiana tabacum HOM05D001090 ORTHO05D286492 7.0e-07 58.2 35 82.9


User provided reference genes

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