Gene: arahy.Tifrunner.gnm1.ann1.2022SK

General Information

Structural Information

  • Species Arachis hypogaea
  • Gene Identifier arahy.Tifrunner.gnm1.ann1.2022SK
  • Transcript Identifier arahy.Tifrunner.gnm1.ann1.2022SK.1
  • Gene Type Coding gene
  • Location arahy.Tifrunner.gnm1.Arahy.06 : 6732270-6740992 : negative

Gene Family Information

  • ID HOM05D001410
  • #Genes/#Species 445/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id arahy.Tifrunner.gnm1.ann1.2022SK.v1.0
  • pacid 42639863

Descriptions

  • Description PF00587//PF03129//PF04810//PF04811//PF04815//PF08033//PF09180 - tRNA synthetase class II core domain (G, H, P, S and T) (tRNA-synt_2b) // Anticodon binding domain (HGTP_anticodon) // Sec23/Sec24 zinc finger (zf-Sec23_Sec24) // Sec23/Sec24 trunk domain (Sec23_trunk) // Sec23/Sec24 helical domain (Sec23_helical) // Sec23/Sec24 beta-sandwich domain (Sec23_BS) // Prolyl-tRNA synthetase, C-terminal (ProRS-C_1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006433
IEA
InterProprolyl-tRNA aminoacylation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT4G01810
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT4G01810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004827
IEA
InterProproline-tRNA ligase activity
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
InterPronucleotide binding
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0005737
IEA
InterProcytoplasm
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G62120
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G01810
GO:0070971
ISO
PLAZA Integrative Orthologyendoplasmic reticulum exit site AT4G01810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006896 Sec23/Sec24, trunk domain
IPR036621 Anticodon-binding domain superfamily
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
IPR004154 Anticodon-binding
IPR017449 Prolyl-tRNA synthetase, class II
IPR002316 Proline-tRNA ligase, class IIa
IPR037364 Protein transport protein Sec23
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR016061 Proline-tRNA ligase, class II, C-terminal
IPR036465 von Willebrand factor A-like domain superfamily
IPR036175 Sec23/Sec24 helical domain superfamily
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR012990 Sec23/Sec24 beta-sandwich
IPR006895 Zinc finger, Sec23/Sec24-type
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR006900 Sec23/Sec24, helical domain
IPR036180 Gelsolin-like domain superfamily
IPR033721 Prolyl-tRNA synthetase, catalytic domain
Mapman id Description
17.2.17 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase