Gene: Sopen01g030630

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen01g030630
  • Transcript Identifier Sopen01g030630.1
  • Gene Type Coding gene
  • Location Spenn-ch01 : 87895809-87901736 : positive

Gene Family Information

  • ID HOM05D001090
  • #Genes/#Species 563/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen01g030630.1

Descriptions

  • Description Sec23/Sec24 protein transport family protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport | LOCATED IN: COPII vesicle coat | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain , Sec23/Sec24 beta-sandwich , Sec23/Sec24, trunk domain , Zinc finger, Sec23/Sec24-type , Gelsolin domain | BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006605
ISO
PLAZA Homology (enrichment)protein targeting HOM05D001090
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT4G01810
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT4G01810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G01810
GO:0016020
ISO
PLAZA Homology (enrichment)membrane HOM05D001090
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G01810
GO:0070971
ISO
PLAZA Integrative Orthologyendoplasmic reticulum exit site AT4G01810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006895 Zinc finger, Sec23/Sec24-type
IPR036465 von Willebrand factor A-like domain superfamily
IPR036175 Sec23/Sec24 helical domain superfamily
IPR037364 Protein transport protein Sec23
IPR036180 Gelsolin-like domain superfamily
IPR006896 Sec23/Sec24, trunk domain
IPR006900 Sec23/Sec24, helical domain
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR012990 Sec23/Sec24 beta-sandwich
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
Mapman id Description
35.1 not assigned.annotated