Gene: FvH4_1g26250
General Information
Structural Information
- Species Fragaria vesca
- Gene Identifier FvH4_1g26250
- Transcript Identifier FvH4_1g26250.t1
- Gene Type Coding gene
- Location Fvb1 : 18072734-18077213 : negative
Gene Family Information
- ID HOM05D001090
- #Genes/#Species 563/100
- Phylogenetic origin
- ID ORTHO05D006167
- #Genes/#Species 146/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id FvH4_1g26250.v4.0.a2
- pacid 50694666
Descriptions
- Description PTHR11141//PTHR11141:SF6 - PROTEIN TRANSPORT PROTEIN SEC23 // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0006605 | ISO | PLAZA Homology (enrichment) | protein targeting | HOM05D001090 |
| GO:0048658 | ISO | PLAZA Integrative Orthology | anther wall tapetum development | AT4G01810 |
| GO:0010584 | ISO | PLAZA Integrative Orthology | pollen exine formation | AT4G01810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D001090 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030127 | IEA | InterPro | COPII vesicle coat | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT4G01810 |
| GO:0016020 | ISO | PLAZA Homology (enrichment) | membrane | HOM05D001090 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT4G01810 |
| GO:0070971 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum exit site | AT4G01810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR006900 | Sec23/Sec24, helical domain |
| IPR037364 | Protein transport protein Sec23 |
| IPR036180 | Gelsolin-like domain superfamily |
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR007123 | Gelsolin-like domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |