Gene: Pp3c24_9090

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c24_9090
  • Transcript Identifier Pp3c24_9090V3.1
  • Gene Type Coding gene
  • Location Chr24 : 6298063-6302854 : positive

Gene Family Information

  • ID HOM05D001090
  • #Genes/#Species 563/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c24_9090V3.1
  • pacid 32908726
  • alias Phypa_142744
  • alias Pp1s196_14V6
  • alias Phpat.024G031100
  • uniprot A0A2K1IG34

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0010584
ISO
PLAZA Integrative Orthologypollen exine formation AT4G01810
GO:0048658
ISO
PLAZA Integrative Orthologyanther wall tapetum development AT4G01810
GO:0006605
ISO
PLAZA Homology (enrichment)protein targeting HOM05D001090
GO:0090110
IBA
GOA DatabaseCOPII-coated vesicle cargo loading
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001090
GO:0005096
IBA
GOA DatabaseGTPase activator activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G01810
GO:0070971
IBA
GOA Databaseendoplasmic reticulum exit site
GO:0030127
IBA
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0012507
IEA
GOA DatabaseER to Golgi transport vesicle membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036180 Gelsolin-like domain superfamily
IPR006896 Sec23/Sec24, trunk domain
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR006900 Sec23/Sec24, helical domain
IPR036465 von Willebrand factor A-like domain superfamily
IPR006895 Zinc finger, Sec23/Sec24-type
IPR012990 Sec23/Sec24 beta-sandwich
IPR037364 Protein transport protein Sec23
IPR036175 Sec23/Sec24 helical domain superfamily
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
Mapman id Description
35.1 not assigned.annotated