Gene: AT4G01810

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G01810
  • Transcript Identifier AT4G01810.1
  • Gene Type Coding gene
  • Location Chr4 : 776734-779802 : negative

Gene Family Information

  • ID HOM05D001090
  • #Genes/#Species 563/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G01810.1
  • uniprot Q84WV4

Descriptions

  • Description Sec23/Sec24 protein transport family protein
  • Computational description Sec23/Sec24 protein transport family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular protein transport, ER to Golgi vesicle-mediated transport; LOCATED IN: COPII vesicle coat; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sec23/Sec24, helical domain (InterPro:IPR006900), Sec23/Sec24 beta-sandwich (InterPro:IPR012990), Sec23/Sec24, trunk domain (InterPro:IPR006896), Zinc finger, Sec23/Sec24-type (InterPro:IPR006895), Gelsolin domain (InterPro:IPR007123); BEST Arabidopsis thaliana protein match is: Sec23/Sec24 protein transport family protein (TAIR:AT2G21630.1); Has 8290 Blast hits to 5679 proteins in 621 species: Archae - 16; Bacteria - 1021; Metazoa - 2159; Fungi - 1153; Plants - 2353; Viruses - 447; Other Eukaryotes - 1141 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006605
ISO
PLAZA Homology (enrichment)protein targeting HOM05D001090
GO:0006888
IEA
GOA Databaseendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006888
IEA
InterProendoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006886
IEA
Gene Ontologyintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0050790
IEA
GOA Databaseregulation of catalytic activity
GO:0090110
IBA
Gene OntologyCOPII-coated vesicle cargo loading1
GO:0048658
IMP
Gene Ontologyanther wall tapetum development2
GO:0010584
IMP
Gene Ontologypollen exine formation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D001090
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0005096
IBA
Gene OntologyGTPase activator activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
GOA Databasecytosol
GO:0030127
IEA
GOA DatabaseCOPII vesicle coat
GO:0030127
IBA
Gene OntologyCOPII vesicle coat1
GO:0030127
IEA
InterProCOPII vesicle coat
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm2
GO:0005783
IEA
GOA Databaseendoplasmic reticulum
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0012507
IEA
GOA DatabaseER to Golgi transport vesicle membrane
GO:0070971
IDA
IBA
Gene Ontologyendoplasmic reticulum exit site1 2
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029006 ADF-H/Gelsolin-like domain superfamily
IPR007123 Gelsolin-like domain
IPR012990 Sec23/Sec24 beta-sandwich
IPR036174 Zinc finger, Sec23/Sec24-type superfamily
IPR036465 von Willebrand factor A-like domain superfamily
IPR036175 Sec23/Sec24 helical domain superfamily
IPR006900 Sec23/Sec24, helical domain
IPR006895 Zinc finger, Sec23/Sec24-type
IPR006896 Sec23/Sec24, trunk domain
IPR037364 Protein transport protein Sec23
IPR036180 Gelsolin-like domain superfamily
Mapman id Description
35.1 not assigned.annotated