Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003222g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.4e-56 221.9 107 100.0
Nitab4.5_0003222g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 1.5e-37 159.5 139 64.0
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.3e-29 131.7 72 88.9
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.3e-29 131.7 72 88.9
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.3e-29 131.7 72 88.9
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 3.6e-28 128.3 68 91.2
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 3.6e-28 128.3 68 91.2
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 4.8e-28 127.9 72 86.1
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 6.2e-28 127.5 68 89.7
Migut.D01343 Erythranthe guttata HOM05D000216 ORTHO05D000634 1.4e-27 126.3 68 88.2
ATR0187G002 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.8e-27 125.9 67 89.6
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 3.1e-27 125.2 67 89.6
COL.COLO4_37398 Corchorus olitorius HOM05D000216 ORTHO05D000634 3.1e-27 125.2 68 86.8
Gorai.005G167800 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.1e-27 125.2 68 86.8
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 4.0e-27 124.8 72 83.3
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 4.0e-27 124.8 72 83.3
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 6.9e-27 124.0 68 86.8
Nitab4.5_0002734g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 9.0e-27 123.6 69 88.4
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 1.2e-26 123.2 67 88.1
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 1.2e-26 123.2 68 85.3
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
BolSC37t60766H Brassica oleracea HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
BolSC44t60848H Brassica oleracea HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
BolSC45t60939H Brassica oleracea HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
BraSC151t45702Z Brassica rapa HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
BraSC58t46407Z Brassica rapa HOM05D000216 ORTHO05D000634 2.6e-26 122.1 72 80.6
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 2.6e-26 122.1 68 83.8
BNapus_Darmor_BZH_scaffold_253p00070 Brassica napus HOM05D000216 ORTHO05D000634 3.4e-26 121.7 72 79.2
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 3.4e-26 121.7 72 80.6
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 3.4e-26 121.7 68 82.4
QL93p1429_0001 Quercus lobata HOM05D000216 ORTHO05D000634 3.4e-26 121.7 68 83.8
Hund27561 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund27997 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund28278 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 4.5e-26 121.3 67 86.6
Hund28386 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund28558 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund29353 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hund29739 Selenicereus undatus HOM05D000216 ORTHO05D000634 4.5e-26 121.3 67 86.6
Hma1.2p1_0094F.1_g047102 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 7.6e-26 120.6 68 83.8
FAN07G2613 Fragaria x ananassa HOM05D000216 ORTHO05D000634 9.9e-26 120.2 67 85.1
AUR62024083 Chenopodium quinoa HOM05D000216 ORTHO05D001131 1.3e-25 119.8 67 83.6
Ca_05612_v3 Cicer arietinum L. HOM05D000216 ORTHO05D000634 8.4e-25 117.1 70 82.9
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 4.2e-24 114.8 70 81.4
Hund28576 Selenicereus undatus HOM05D000216 ORTHO05D000634 5.4e-24 114.4 67 83.6
Lj2A1227T105 Lonicera japonica HOM05D000216 ORTHO05D000634 9.3e-24 113.6 67 79.1
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 1.2e-23 113.2 68 80.9
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 67 79.1
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 67 79.1
Lj2C1239T55 Lonicera japonica HOM05D000216 ORTHO05D000634 1.6e-23 112.8 67 79.1
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.1e-23 112.5 70 80.0
CAN.G802.5 Capsicum annuum HOM05D001109 ORTHO05D001051 2.1e-23 112.5 68 79.4
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 7.9e-23 110.5 67 79.1
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 7.9e-23 110.5 67 79.1
Medtr8g016510 Medicago truncatula HOM05D000216 ORTHO05D000634 7.9e-23 110.5 70 80.0
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-22 109.8 72 77.8
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 1.3e-22 109.8 72 77.8
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.3e-22 109.8 72 77.8
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 5.1e-22 107.8 56 91.1
HanXRQChr00c0823g0577611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.5e-21 106.3 67 77.6
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.5e-21 106.3 67 77.6
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 1.5e-21 106.3 67 77.6
HanXRQChr15g0488301 Helianthus annuus HOM05D000216 ORTHO05D000634 1.5e-21 106.3 67 77.6
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 1.5e-21 106.3 67 77.6
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 1.9e-21 105.9 67 77.6
Lsat_1_v5_gn_2_41761 Lactuca sativa HOM05D000216 ORTHO05D000634 1.9e-21 105.9 67 77.6
Lsat_1_v5_gn_6_87861 Lactuca sativa HOM05D000216 ORTHO05D000634 1.9e-21 105.9 67 77.6
Lsat_1_v5_gn_8_1820 Lactuca sativa HOM05D000216 ORTHO05D000634 1.9e-21 105.9 67 77.6
Psat7g026760 Pisum sativum HOM05D000216 ORTHO05D000634 7.4e-21 104.0 68 75.0
Lsat_1_v5_gn_8_77281 Lactuca sativa HOM05D000216 ORTHO05D000634 2.1e-20 102.4 63 77.8
HanXRQChr13g0417241 Helianthus annuus HOM05D000216 ORTHO05D001131 8.1e-20 100.5 66 74.2
Gorai.001G177800 Gossypium raimondii HOM05D000216 ORTHO05D000634 1.8e-19 99.4 58 81.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.8e-19 99.4 72 63.9
Medtr7g067760 Medicago truncatula HOM05D000216 ORTHO05D000634 2.4e-19 99.0 55 87.3
Psat5g263640 Pisum sativum HOM05D000216 ORTHO05D000634 4.0e-19 98.2 64 76.6
arahy.Tifrunner.gnm1.ann1.Q9IK60 Arachis hypogaea HOM05D000216 ORTHO05D014073 9.0e-19 97.1 63 76.2
Gohir.D07G155233 Gossypium hirsutum HOM05D000216 ORTHO05D000634 2.0e-18 95.9 57 78.9
Lalb_Chr06g0173041 Lupinus albus HOM05D000216 ORTHO05D000634 2.0e-18 95.9 69 68.1
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 7.6e-18 94.0 68 70.6
CsaV3_UNG208340 Cucumis sativus L. HOM05D000216 ORTHO05D001131 6.4e-17 90.9 50 88.0
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 6.4e-17 90.9 68 69.1
EL10Ac9g21013 Beta vulgaris HOM05D000216 ORTHO05D000634 1.6e-15 86.3 54 75.9
Nitab4.5_0000172g0250 Nicotiana tabacum HOM05D000216 ORTHO05D001131 2.3e-14 82.4 46 84.8
Solyc07g021210.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 3.9e-14 81.6 59 69.5
Psat0s1150g0080 Pisum sativum HOM05D000216 ORTHO05D000634 8.7e-14 80.5 57 70.2
HanXRQChr00c0994g0578181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.3e-12 76.6 67 61.2
Lalb_Chr09g0335381 Lupinus albus HOM05D000216 ORTHO05D000634 6.2e-12 74.3 37 91.9
Lalb_Chr24g0400941 Lupinus albus HOM05D000216 ORTHO05D000634 6.2e-12 74.3 37 91.9
AL2G20940 Arabidopsis lyrata HOM05D000216 ORTHO05D000634 1.8e-11 72.8 37 89.2
BraSC58t46478Z Brassica rapa HOM05D000216 ORTHO05D000634 1.8e-11 72.8 37 89.2
unitig_91.g26497 Utricularia gibba HOM05D000216 ORTHO05D000634 1.8e-11 72.8 37 86.5
Lju2566C0G7 Lonicera japonica HOM05D000216 ORTHO05D000634 6.9e-11 70.9 41 80.5
Psat0s4841g0120 Pisum sativum HOM05D000216 ORTHO05D000634 1.2e-10 70.1 35 88.6
Psat7g064880 Pisum sativum HOM05D000216 ORTHO05D000634 1.2e-10 70.1 37 83.8
SEGI_00207 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 1.5e-10 69.7 54 57.4
SGA_v2.0_scaffold10G05379 Striga asiatica HOM05D000216 ORTHO05D000634 5.8e-10 67.8 38 76.3
Lj2C1224G59 Lonicera japonica HOM05D000216 ORTHO05D000634 2.2e-09 65.9 36 80.6
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 2.2e-09 65.9 36 80.6
Lalb_Chr07g0192751 Lupinus albus HOM05D000216 ORTHO05D000634 3.8e-09 65.1 37 81.1
Psat6g181520 Pisum sativum HOM05D000216 ORTHO05D000634 4.9e-09 64.7 37 75.7
Lalb_Chr06g0173131 Lupinus albus HOM05D000216 ORTHO05D000634 8.4e-09 63.9 37 75.7
Medtr4g009210 Medicago truncatula HOM05D000216 ORTHO05D000634 2.1e-07 59.3 37 78.4
SMO086G0006 Selaginella moellendorffii HOM05D000216 ORTHO05D000634 1.0e-06 57.0 55 50.9


User provided reference genes

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