Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003222g0020 Nicotiana tabacum HOM05D000216 ORTHO05D000634 2.0e-74 282.3 139 100.0
Nitab4.5_0003222g0030 Nicotiana tabacum HOM05D000216 ORTHO05D000634 3.9e-38 161.8 139 64.0
Nitab4.5_0002734g0010 Nicotiana tabacum HOM05D007924 ORTHO05D010328 5.2e-27 124.8 73 83.6
Solyc00g500052.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-26 122.5 65 92.3
Solyc00g500135.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-26 122.5 65 92.3
Solyc00g500205.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.6e-26 122.5 65 92.3
CAN.G219.18 Capsicum annuum HOM05D000216 ORTHO05D000634 3.7e-25 118.6 65 89.2
Potri.013G140850 Populus trichocarpa HOM05D000216 ORTHO05D000634 1.1e-24 117.1 65 89.2
SabraPtG0001000 Salix brachista HOM05D000216 ORTHO05D000634 1.1e-24 117.1 65 89.2
ATR0187G002 Amborella trichopoda HOM05D000216 ORTHO05D000634 1.4e-24 116.7 65 87.7
RcHm_v2.0_CPg0502411 Rosa chinensis HOM05D000216 ORTHO05D000634 1.9e-24 116.3 65 87.7
Ah.10g027600 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.4e-24 115.9 65 87.7
LjContig00489g0016986 Lotus japonicus HOM05D000216 ORTHO05D000634 3.2e-24 115.5 65 86.2
SalBow1G4778 Salvia bowleyana HOM05D000216 ORTHO05D001131 3.2e-24 115.5 65 86.2
COL.COLO4_37398 Corchorus olitorius HOM05D000216 ORTHO05D000634 4.1e-24 115.2 65 86.2
Migut.D01343 Erythranthe guttata HOM05D000216 ORTHO05D000634 4.1e-24 115.2 65 86.2
Gorai.005G167800 Gossypium raimondii HOM05D000216 ORTHO05D000634 4.1e-24 115.2 65 86.2
EL10As12g24016 Beta vulgaris HOM05D000216 ORTHO05D001131 9.2e-24 114.0 65 86.2
Sed0025233 Sechium edule HOM05D000216 ORTHO05D001131 9.2e-24 114.0 65 86.2
PGR111G0082 Punica granatum HOM05D000216 ORTHO05D000634 1.6e-23 113.2 65 84.6
ATCG00180 Arabidopsis thaliana HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BolSC37t60766H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BolSC44t60848H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BolSC45t60875H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BolSC45t60939H Brassica oleracea HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BraSC151t45702Z Brassica rapa HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BraSC58t46407Z Brassica rapa HOM05D000216 ORTHO05D000634 2.1e-23 112.8 65 83.1
BNapus_Darmor_BZH_scaffold_253p00070 Brassica napus HOM05D000216 ORTHO05D000634 2.7e-23 112.5 65 81.5
CARHR281930 Cardamine hirsuta HOM05D000216 ORTHO05D001131 2.7e-23 112.5 65 83.1
PSO548G0054 Papaver somniferum HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 83.1
Hund27561 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund27655 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund27866 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund27997 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund28278 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund28351 Selenicereus undatus HOM05D000216 ORTHO05D001131 3.5e-23 112.1 65 84.6
Hund28386 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund28558 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund29353 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
Hund29739 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.5e-23 112.1 65 84.6
DCAR_032475 Daucus carota HOM05D000216 ORTHO05D000634 4.6e-23 111.7 65 81.5
QL93p1429_0001 Quercus lobata HOM05D000216 ORTHO05D000634 4.6e-23 111.7 65 83.1
AUR62024083 Chenopodium quinoa HOM05D000216 ORTHO05D001131 1.0e-22 110.5 65 81.5
Hma1.2p1_0094F.1_g047102 Hydrangea macrophylla HOM05D000216 ORTHO05D000634 1.0e-22 110.5 65 83.1
Hund28576 Selenicereus undatus HOM05D000216 ORTHO05D000634 3.0e-22 109.0 65 83.1
Ca_05612_v3 Cicer arietinum L. HOM05D000216 ORTHO05D000634 1.5e-21 106.7 67 82.1
FAN07G2613 Fragaria x ananassa HOM05D000216 ORTHO05D000634 3.3e-21 105.5 64 81.2
LjContig00318g0019842 Lotus japonicus HOM05D000216 ORTHO05D000634 5.6e-21 104.8 67 80.6
Lj2A1227T105 Lonicera japonica HOM05D000216 ORTHO05D000634 1.2e-20 103.6 64 78.1
Sed0024913 Sechium edule HOM05D000216 ORTHO05D000634 1.2e-20 103.6 56 89.3
CAN.G802.5 Capsicum annuum HOM05D001109 ORTHO05D001051 1.6e-20 103.2 60 83.3
Lj2A1237T129 Lonicera japonica HOM05D000216 ORTHO05D000634 2.1e-20 102.8 64 78.1
Lj2C1238G20 Lonicera japonica HOM05D000216 ORTHO05D000634 2.1e-20 102.8 64 78.1
Lj2C1239T55 Lonicera japonica HOM05D000216 ORTHO05D000634 2.1e-20 102.8 64 78.1
arahy.Tifrunner.gnm1.ann1.YJD706 Arachis hypogaea HOM05D000216 ORTHO05D000634 2.8e-20 102.4 67 79.1
Psat0s6357g0040 Pisum sativum HOM05D000216 ORTHO05D001131 2.8e-20 102.4 65 78.5
ECA054G0005 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.1e-19 100.5 64 78.1
ECA169G0008 Erigeron canadensis HOM05D000216 ORTHO05D000634 1.1e-19 100.5 64 78.1
Medtr8g016510 Medicago truncatula HOM05D000216 ORTHO05D000634 1.1e-19 100.5 67 79.1
Medtr3g062770 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-19 99.8 69 76.8
Medtr3g062790 Medicago truncatula HOM05D000216 ORTHO05D000634 1.8e-19 99.8 69 76.8
Medtr4g051130 Medicago truncatula HOM05D000216 ORTHO05D001131 1.8e-19 99.8 69 76.8
Psat7g026760 Pisum sativum HOM05D000216 ORTHO05D000634 1.5e-18 96.7 65 73.8
HanXRQChr00c0823g0577611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-18 96.3 64 76.6
HanXRQChr08g0210181 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-18 96.3 64 76.6
HanXRQChr11g0326611 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-18 96.3 64 76.6
HanXRQChr15g0488301 Helianthus annuus HOM05D000216 ORTHO05D000634 2.0e-18 96.3 64 76.6
HanXRQCPg0579801 Helianthus annuus HOM05D000216 ORTHO05D001131 2.0e-18 96.3 64 76.6
Lsat_1_v5_gn_1_96161 Lactuca sativa HOM05D000216 ORTHO05D000634 2.6e-18 95.9 64 76.6
Lsat_1_v5_gn_2_41761 Lactuca sativa HOM05D000216 ORTHO05D000634 2.6e-18 95.9 64 76.6
Lsat_1_v5_gn_6_87861 Lactuca sativa HOM05D000216 ORTHO05D000634 2.6e-18 95.9 64 76.6
Lsat_1_v5_gn_8_1820 Lactuca sativa HOM05D000216 ORTHO05D000634 2.6e-18 95.9 64 76.6
Gorai.001G177800 Gossypium raimondii HOM05D000216 ORTHO05D000634 3.4e-18 95.5 54 85.2
Medtr7g067760 Medicago truncatula HOM05D000216 ORTHO05D000634 3.4e-18 95.5 55 85.5
Psat5g263640 Pisum sativum HOM05D000216 ORTHO05D000634 5.8e-18 94.7 64 75.0
Lsat_1_v5_gn_8_77281 Lactuca sativa HOM05D000216 ORTHO05D000634 2.9e-17 92.4 57 78.9
Gohir.D07G155233 Gossypium hirsutum HOM05D000216 ORTHO05D000634 3.8e-17 92.0 53 83.0
arahy.Tifrunner.gnm1.ann1.Q9IK60 Arachis hypogaea HOM05D000216 ORTHO05D014073 4.9e-17 91.7 62 75.8
HanXRQChr13g0417241 Helianthus annuus HOM05D000216 ORTHO05D001131 1.4e-16 90.1 63 73.0
Medtr0002s0510 Medicago truncatula HOM05D000216 ORTHO05D001131 1.4e-16 90.1 65 64.6
CsaV3_UNG208340 Cucumis sativus L. HOM05D000216 ORTHO05D001131 1.2e-15 87.0 50 86.0
Lalb_Chr06g0173041 Lupinus albus HOM05D000216 ORTHO05D000634 1.6e-15 86.7 64 68.8
Sed0020606 Sechium edule HOM05D000216 ORTHO05D000634 4.6e-15 85.1 56 76.8
Sed0025165 Sechium edule HOM05D000216 ORTHO05D000634 1.0e-14 84.0 65 69.2
EL10Ac9g21013 Beta vulgaris HOM05D000216 ORTHO05D000634 2.3e-14 82.8 54 74.1
Nitab4.5_0000172g0250 Nicotiana tabacum HOM05D000216 ORTHO05D001131 1.6e-12 76.6 43 86.0
Solyc07g021210.1 Solanum lycopersicum HOM05D000216 ORTHO05D000634 2.1e-12 76.3 74 59.5
Psat0s1150g0080 Pisum sativum HOM05D000216 ORTHO05D000634 4.0e-11 72.0 47 74.5
Lju2566C0G7 Lonicera japonica HOM05D000216 ORTHO05D000634 1.2e-10 70.5 41 80.5
Lalb_Chr09g0335381 Lupinus albus HOM05D000216 ORTHO05D000634 1.2e-10 70.5 37 89.2
Lalb_Chr24g0400941 Lupinus albus HOM05D000216 ORTHO05D000634 1.2e-10 70.5 37 89.2
AL2G20940 Arabidopsis lyrata HOM05D000216 ORTHO05D000634 3.4e-10 68.9 37 86.5
BraSC58t46478Z Brassica rapa HOM05D000216 ORTHO05D000634 3.4e-10 68.9 37 86.5
unitig_91.g26497 Utricularia gibba HOM05D000216 ORTHO05D000634 3.4e-10 68.9 37 83.8
HanXRQChr00c0994g0578181 Helianthus annuus HOM05D000216 ORTHO05D000634 1.7e-09 66.6 64 59.4
Psat0s4841g0120 Pisum sativum HOM05D000216 ORTHO05D000634 2.2e-09 66.2 35 85.7
Psat7g064880 Pisum sativum HOM05D000216 ORTHO05D000634 2.2e-09 66.2 37 81.1
SEGI_00207 Sequoiadendron giganteum HOM05D000216 ORTHO05D000634 2.9e-09 65.9 54 55.6
Lalb_Chr07g0192751 Lupinus albus HOM05D000216 ORTHO05D000634 6.4e-09 64.7 37 81.1
SGA_v2.0_scaffold10G05379 Striga asiatica HOM05D000216 ORTHO05D000634 1.1e-08 63.9 38 73.7
Lj2C1224G59 Lonicera japonica HOM05D000216 ORTHO05D000634 3.2e-08 62.4 36 77.8
Lj2C1239G21 Lonicera japonica HOM05D000216 ORTHO05D000634 3.2e-08 62.4 36 77.8
Lalb_Chr06g0173131 Lupinus albus HOM05D000216 ORTHO05D000634 1.6e-07 60.1 37 73.0
Medtr4g009210 Medicago truncatula HOM05D000216 ORTHO05D000634 3.5e-07 58.9 37 78.4
Nitab4.5_0003945g0100 Nicotiana tabacum HOM05D005794 ORTHO05D006814 1.7e-06 56.6 33 75.8
Psat6g181520 Pisum sativum HOM05D000216 ORTHO05D000634 1.7e-06 56.6 37 70.3
Nitab4.5_0001152g0290 Nicotiana tabacum HOM05D003517 ORTHO05D009794 5.1e-06 55.1 50 62.0
Nitab4.5_0002418g0190 Nicotiana tabacum HOM05D005794 ORTHO05D006814 8.7e-06 54.3 33 72.7


User provided reference genes

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